Changeset 1fd675 for src/Actions/MoleculeAction/SaveTemperatureAction.cpp
- Timestamp:
- Aug 28, 2010, 12:57:56 AM (14 years ago)
- Branches:
- Action_Thermostats, Add_AtomRandomPerturbation, Add_FitFragmentPartialChargesAction, Add_RotateAroundBondAction, Add_SelectAtomByNameAction, Added_ParseSaveFragmentResults, AddingActions_SaveParseParticleParameters, Adding_Graph_to_ChangeBondActions, Adding_MD_integration_tests, Adding_ParticleName_to_Atom, Adding_StructOpt_integration_tests, AtomFragments, Automaking_mpqc_open, AutomationFragmentation_failures, Candidate_v1.5.4, Candidate_v1.6.0, Candidate_v1.6.1, ChangeBugEmailaddress, ChangingTestPorts, ChemicalSpaceEvaluator, CombiningParticlePotentialParsing, Combining_Subpackages, Debian_Package_split, Debian_package_split_molecuildergui_only, Disabling_MemDebug, Docu_Python_wait, EmpiricalPotential_contain_HomologyGraph, EmpiricalPotential_contain_HomologyGraph_documentation, Enable_parallel_make_install, Enhance_userguide, Enhanced_StructuralOptimization, Enhanced_StructuralOptimization_continued, Example_ManyWaysToTranslateAtom, Exclude_Hydrogens_annealWithBondGraph, FitPartialCharges_GlobalError, Fix_BoundInBox_CenterInBox_MoleculeActions, Fix_ChargeSampling_PBC, Fix_ChronosMutex, Fix_FitPartialCharges, Fix_FitPotential_needs_atomicnumbers, Fix_ForceAnnealing, Fix_IndependentFragmentGrids, Fix_ParseParticles, Fix_ParseParticles_split_forward_backward_Actions, Fix_PopActions, Fix_QtFragmentList_sorted_selection, Fix_Restrictedkeyset_FragmentMolecule, Fix_StatusMsg, Fix_StepWorldTime_single_argument, Fix_Verbose_Codepatterns, Fix_fitting_potentials, Fixes, ForceAnnealing_goodresults, ForceAnnealing_oldresults, ForceAnnealing_tocheck, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_continued, ForceAnnealing_with_BondGraph_continued_betteresults, ForceAnnealing_with_BondGraph_contraction-expansion, FragmentAction_writes_AtomFragments, FragmentMolecule_checks_bonddegrees, GeometryObjects, Gui_Fixes, Gui_displays_atomic_force_velocity, ImplicitCharges, IndependentFragmentGrids, IndependentFragmentGrids_IndividualZeroInstances, IndependentFragmentGrids_IntegrationTest, IndependentFragmentGrids_Sole_NN_Calculation, JobMarket_RobustOnKillsSegFaults, JobMarket_StableWorkerPool, JobMarket_unresolvable_hostname_fix, MoreRobust_FragmentAutomation, ODR_violation_mpqc_open, PartialCharges_OrthogonalSummation, PdbParser_setsAtomName, PythonUI_with_named_parameters, QtGui_reactivate_TimeChanged_changes, Recreated_GuiChecks, Rewrite_FitPartialCharges, RotateToPrincipalAxisSystem_UndoRedo, SaturateAtoms_findBestMatching, SaturateAtoms_singleDegree, StoppableMakroAction, Subpackage_CodePatterns, Subpackage_JobMarket, Subpackage_LinearAlgebra, Subpackage_levmar, Subpackage_mpqc_open, Subpackage_vmg, Switchable_LogView, ThirdParty_MPQC_rebuilt_buildsystem, TrajectoryDependenant_MaxOrder, TremoloParser_IncreasedPrecision, TremoloParser_MultipleTimesteps, TremoloParser_setsAtomName, Ubuntu_1604_changes, stable
- Children:
- 966e12
- Parents:
- 53d01c
- git-author:
- Frederik Heber <heber@…> (08/26/10 21:05:34)
- git-committer:
- Frederik Heber <heber@…> (08/28/10 00:57:56)
- File:
-
- 1 edited
Legend:
- Unmodified
- Added
- Removed
-
src/Actions/MoleculeAction/SaveTemperatureAction.cpp
r53d01c r1fd675 20 20 #include "Helpers/MemDebug.hpp" 21 21 22 #include "Actions/MoleculeAction/SaveTemperatureAction.hpp"23 #include "Actions/ActionRegistry.hpp"24 22 #include "Helpers/Log.hpp" 25 23 #include "molecule.hpp" … … 33 31 using namespace std; 34 32 35 #include "UIElements/UIFactory.hpp" 36 #include "UIElements/Dialog.hpp" 37 #include "Actions/ValueStorage.hpp" 33 #include "Actions/MoleculeAction/SaveTemperatureAction.hpp" 38 34 39 /****** MoleculeSaveTemperatureAction *****/ 40 41 // memento to remember the state when undoing 42 43 //class MoleculeSaveTemperatureState : public ActionState { 44 //public: 45 // MoleculeSaveTemperatureState(molecule* _mol,std::string _lastName) : 46 // mol(_mol), 47 // lastName(_lastName) 48 // {} 49 // molecule* mol; 50 // std::string lastName; 51 //}; 52 53 const char MoleculeSaveTemperatureAction::NAME[] = "save-temperature"; 54 55 MoleculeSaveTemperatureAction::MoleculeSaveTemperatureAction() : 56 Action(NAME) 57 {} 58 59 MoleculeSaveTemperatureAction::~MoleculeSaveTemperatureAction() 60 {} 61 62 void MoleculeSaveTemperature(std::string &temperaturefile) { 63 ValueStorage::getInstance().setCurrentValue(MoleculeSaveTemperatureAction::NAME, temperaturefile); 64 ActionRegistry::getInstance().getActionByName(MoleculeSaveTemperatureAction::NAME)->call(Action::NonInteractive); 65 }; 66 67 void MoleculeSaveTemperatureAction::getParametersfromValueStorage() 68 {}; 69 70 Dialog* MoleculeSaveTemperatureAction::fillDialog(Dialog *dialog) { 71 ASSERT(dialog,"No Dialog given when filling action dialog"); 72 73 dialog->queryString(NAME, ValueStorage::getInstance().getDescription(NAME)); 74 75 return dialog; 76 } 77 35 // and construct the stuff 36 #include "SaveTemperatureAction.def" 37 #include "Action_impl_pre.hpp" 38 /** =========== define the function ====================== */ 78 39 Action::state_ptr MoleculeSaveTemperatureAction::performCall() { 79 string filename;80 40 molecule *mol = NULL; 81 41 82 ValueStorage::getInstance().queryCurrentValue(NAME, filename); 42 // obtain information 43 getParametersfromValueStorage(); 83 44 84 45 for (World::MoleculeSelectionIterator iter = World::getInstance().beginMoleculeSelection(); iter != World::getInstance().endMoleculeSelection(); ++iter) { 85 46 mol = iter->second; 86 DoLog(1) && (Log() << Verbose(1) << "Storing temperatures in " << filename << "." << endl);47 DoLog(1) && (Log() << Verbose(1) << "Storing temperatures in " << params.temperaturefile << "." << endl); 87 48 ofstream output; 88 output.open( filename.c_str(), ios::trunc);49 output.open(params.temperaturefile.c_str(), ios::trunc); 89 50 if (output.fail() || !mol->OutputTemperatureFromTrajectories((ofstream * const) &output, 0, mol->MDSteps)) 90 51 DoLog(2) && (Log() << Verbose(2) << "File could not be written." << endl); … … 121 82 return NAME; 122 83 } 84 /** =========== end of function ====================== */
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