[fea945] | 1 | /*
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| 2 | * Project: MoleCuilder
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| 3 | * Description: creates and alters molecular systems
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[0aa122] | 4 | * Copyright (C) 2012 University of Bonn. All rights reserved.
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[fea945] | 5 | * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
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| 6 | */
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| 7 |
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| 8 | /*
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| 9 | * LinkedCell_ControllerUnitTest.cpp
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| 10 | *
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| 11 | * Created on: Nov 29, 2011
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| 12 | * Author: heber
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| 13 | */
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| 14 |
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| 15 | // include config.h
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| 16 | #ifdef HAVE_CONFIG_H
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| 17 | #include <config.h>
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| 18 | #endif
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| 19 |
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| 20 | using namespace std;
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| 21 |
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| 22 | #include <cppunit/CompilerOutputter.h>
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| 23 | #include <cppunit/extensions/TestFactoryRegistry.h>
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| 24 | #include <cppunit/ui/text/TestRunner.h>
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| 25 |
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[c80643] | 26 | #include "Atom/atom.hpp"
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[fea945] | 27 | #include "Box.hpp"
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| 28 | #include "CodePatterns/Assert.hpp"
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| 29 | #include "LinearAlgebra/RealSpaceMatrix.hpp"
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| 30 | #include "LinkedCell/LinkedCell_Controller.hpp"
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[fe8253] | 31 | #include "LinkedCell/LinkedCell_View.hpp"
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[69459d] | 32 | #include "LinkedCell/LinkedCell_View_ModelWrapper.hpp"
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[fea945] | 33 | #include "LinkedCell/unittests/defs.hpp"
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[c80643] | 34 | #include "LinkedCell/PointCloudAdaptor.hpp"
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[fea945] | 35 |
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| 36 | #include "LinkedCell_ControllerUnitTest.hpp"
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| 37 |
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| 38 | #ifdef HAVE_TESTRUNNER
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| 39 | #include "UnitTestMain.hpp"
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| 40 | #endif /*HAVE_TESTRUNNER*/
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| 41 |
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| 42 | /********************************************** Test classes **************************************/
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| 43 |
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| 44 | // Registers the fixture into the 'registry'
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| 45 | CPPUNIT_TEST_SUITE_REGISTRATION( LinkedCell_ControllerTest );
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| 46 |
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| 47 |
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| 48 | void LinkedCell_ControllerTest::setUp()
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| 49 | {
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| 50 | // failing asserts should be thrown
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| 51 | ASSERT_DO(Assert::Throw);
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| 52 |
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| 53 | // create diag(20.) matrix
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| 54 | BoxM = new RealSpaceMatrix;
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| 55 | BoxM->setIdentity();
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| 56 | (*BoxM) *= DOMAINLENGTH;
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| 57 |
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| 58 | // create Box with this matrix
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| 59 | domain = new Box(*BoxM);
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| 60 |
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| 61 | controller = new LinkedCell::LinkedCell_Controller(*domain);
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[c80643] | 62 |
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| 63 | // create empty set
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| 64 | emptyset = new PointCloudAdaptor< std::vector<atom *> >(&emptyvector, std::string("emptyset"));
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[fea945] | 65 | }
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| 66 |
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| 67 |
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| 68 | void LinkedCell_ControllerTest::tearDown()
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| 69 | {
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| 70 | delete controller;
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| 71 | delete domain;
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[c80643] | 72 | delete emptyset;
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[fea945] | 73 | }
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| 74 |
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[fe8253] | 75 | /** UnitTest for LinkedCell_Controller's lower and upper thresholds.
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| 76 | */
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| 77 | void LinkedCell_ControllerTest::thresholdTest()
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| 78 | {
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| 79 | /// re-create instances
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| 80 | delete controller;
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| 81 | delete domain;
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| 82 |
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| 83 | /// create diag(..) matrix beyond upper_threshold
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| 84 | const double old_threshold = controller->upper_threshold;
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| 85 | controller->lower_threshold = old_threshold*0.9;
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| 86 | RealSpaceMatrix BoxM;
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| 87 | BoxM.setIdentity();
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| 88 | BoxM *= controller->upper_threshold*.5;
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[fea945] | 89 |
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[fe8253] | 90 | /// create Box with this matrix
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| 91 | domain = new Box(BoxM);
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| 92 |
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| 93 | controller = new LinkedCell::LinkedCell_Controller(*domain);
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| 94 |
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| 95 | /// check that thresholds have been adapted
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| 96 | CPPUNIT_ASSERT( controller->upper_threshold != old_threshold );
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| 97 | CPPUNIT_ASSERT( controller->lower_threshold != old_threshold*0.9 );
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| 98 | }
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| 99 |
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| 100 | /** UnitTest for LinkedCell_Controller::getHeuristicRange().
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| 101 | */
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| 102 | void LinkedCell_ControllerTest::getHeuristicRangeTest()
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| 103 | {
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| 104 | /// re-implementing function to check is nonsense here, instead try some
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| 105 | /// hard-coded, working values;
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| 106 | controller->lower_threshold = 1.;
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| 107 | controller->upper_threshold = 20.;
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| 108 | const double inbetween = 9.5; // half and twice is definitely within both thresholds.
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| 109 |
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| 110 | /// check distance in between
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| 111 | range<double> interval = controller->getHeuristicRange(inbetween);
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| 112 | CPPUNIT_ASSERT ( interval.first != controller->lower_threshold );
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| 113 | CPPUNIT_ASSERT ( interval.last != controller->upper_threshold );
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| 114 | }
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| 115 |
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| 116 | /** UnitTest for LinkedCell_Controller::getViewTest() for getting twice the same view.
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[fea945] | 117 | */
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[fe8253] | 118 | void LinkedCell_ControllerTest::getView_SameViewTest()
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[fea945] | 119 | {
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[fe8253] | 120 | /// obtain a view
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| 121 | CPPUNIT_ASSERT_EQUAL( (size_t)0, controller->ModelsMap.size() );
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[c80643] | 122 | LinkedCell::LinkedCell_View view = controller->getView(2., *emptyset);
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[fe8253] | 123 | CPPUNIT_ASSERT_EQUAL( (size_t)1, controller->ModelsMap.size() );
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| 124 |
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| 125 | {
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| 126 | /// get same view again and check that now new instance appears
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[c80643] | 127 | LinkedCell::LinkedCell_View view_again = controller->getView(2., *emptyset);
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[fe8253] | 128 | CPPUNIT_ASSERT_EQUAL( (size_t)1, controller->ModelsMap.size() );
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| 129 | }
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| 130 | }
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[fea945] | 131 |
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[fe8253] | 132 | /** UnitTest for LinkedCell_Controller::getViewTest() for picking two different views.
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| 133 | */
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| 134 | void LinkedCell_ControllerTest::getView_DifferentViewTest()
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| 135 | {
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| 136 | /// obtain a view
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| 137 | CPPUNIT_ASSERT_EQUAL( (size_t)0, controller->ModelsMap.size() );
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[c80643] | 138 | LinkedCell::LinkedCell_View view = controller->getView(2., *emptyset);
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[fe8253] | 139 | CPPUNIT_ASSERT_EQUAL( (size_t)1, controller->ModelsMap.size() );
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| 140 |
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| 141 | {
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| 142 | /// pick another view that is not close enough
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[c80643] | 143 | LinkedCell::LinkedCell_View view_other = controller->getView(5., *emptyset);
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[fe8253] | 144 | CPPUNIT_ASSERT_EQUAL( (size_t)2, controller->ModelsMap.size() );
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| 145 | }
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| 146 | }
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| 147 |
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| 148 | /** UnitTest for LinkedCell_Controller::getViewTest() for picking further views in range of present one.
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| 149 | */
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| 150 | void LinkedCell_ControllerTest::getView_InRangeViewTest()
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| 151 | {
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| 152 | /// obtain a view
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| 153 | const double edgelength = 2.;
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| 154 | CPPUNIT_ASSERT_EQUAL( (size_t)0, controller->ModelsMap.size() );
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[c80643] | 155 | LinkedCell::LinkedCell_View view = controller->getView(edgelength, *emptyset);
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[fe8253] | 156 | CPPUNIT_ASSERT_EQUAL( (size_t)1, controller->ModelsMap.size() );
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| 157 |
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| 158 | /// pick views that are close enough
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| 159 | range<double> interval = controller->getHeuristicRange(edgelength);
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| 160 | {
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| 161 | /// ... at half lower interval half
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[c80643] | 162 | LinkedCell::LinkedCell_View view_lowerhalf = controller->getView((edgelength + interval.first)/2., *emptyset);
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[fe8253] | 163 | CPPUNIT_ASSERT_EQUAL( (size_t)1, controller->ModelsMap.size() );
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| 164 | }
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| 165 | {
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| 166 | /// ... at half upper interval half
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[c80643] | 167 | LinkedCell::LinkedCell_View view_upperhalf = controller->getView((interval.last + edgelength)/2., *emptyset);
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[fe8253] | 168 | CPPUNIT_ASSERT_EQUAL( (size_t)1, controller->ModelsMap.size() );
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| 169 | }
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| 170 | {
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| 171 | /// ... close to lower boundary
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[c80643] | 172 | LinkedCell::LinkedCell_View view_closelower = controller->getView(interval.first + std::numeric_limits<double>::round_error(), *emptyset);
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[fe8253] | 173 | CPPUNIT_ASSERT_EQUAL( (size_t)1, controller->ModelsMap.size() );
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| 174 | }
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| 175 | {
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| 176 | /// ... close to upper boundary
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[c80643] | 177 | LinkedCell::LinkedCell_View view_closerupper = controller->getView(interval.last - std::numeric_limits<double>::round_error(), *emptyset);
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[fe8253] | 178 | CPPUNIT_ASSERT_EQUAL( (size_t)1, controller->ModelsMap.size() );
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| 179 | }
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| 180 | {
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| 181 | /// on lower boundary
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[c80643] | 182 | LinkedCell::LinkedCell_View view_onlower = controller->getView(interval.first, *emptyset);
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[fe8253] | 183 | CPPUNIT_ASSERT_EQUAL( (size_t)1, controller->ModelsMap.size() );
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| 184 | }
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| 185 | }
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| 186 |
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| 187 | /** UnitTest for LinkedCell_Controller::getViewTest() for picking further views outside range.
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| 188 | */
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| 189 | void LinkedCell_ControllerTest::getView_OutOfRangeViewTest()
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| 190 | {
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| 191 | /// Here we need half of the edge length to be greater than lower_threshold
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| 192 | const double edgelength = 2.5;
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| 193 | CPPUNIT_ASSERT( (edgelength/2.) > controller->lower_threshold );
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| 194 | /// obtain a view
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| 195 | CPPUNIT_ASSERT_EQUAL( (size_t)0, controller->ModelsMap.size() );
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[c80643] | 196 | LinkedCell::LinkedCell_View view = controller->getView(edgelength, *emptyset);
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[fe8253] | 197 | CPPUNIT_ASSERT_EQUAL( (size_t)1, controller->ModelsMap.size() );
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| 198 |
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| 199 | /// pick views that are not close enough and check for new instance
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| 200 | range<double> interval = controller->getHeuristicRange(edgelength);
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| 201 | {
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| 202 | /// ... outside lower boundary
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[c80643] | 203 | LinkedCell::LinkedCell_View view_outsidelower = controller->getView(interval.first - std::numeric_limits<double>::round_error(), *emptyset);
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[fe8253] | 204 | CPPUNIT_ASSERT_EQUAL( (size_t)2, controller->ModelsMap.size() );
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| 205 | }
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| 206 | {
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| 207 | /// ... on upper boundary
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[c80643] | 208 | LinkedCell::LinkedCell_View view_onupper = controller->getView(interval.last, *emptyset);
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[fe8253] | 209 | CPPUNIT_ASSERT_EQUAL( (size_t)3, controller->ModelsMap.size() );
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| 210 | }
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| 211 | }
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| 212 |
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| 213 | /** UnitTest for LinkedCell_Controller::getViewTest() for picking views beneath lower threshold.
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| 214 | */
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| 215 | void LinkedCell_ControllerTest::getView_LowerThresholdViewTest()
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| 216 | {
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| 217 | /// obtain a view
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| 218 | const double edgelength = 1.9*controller->lower_threshold;
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| 219 | CPPUNIT_ASSERT_EQUAL( (size_t)0, controller->ModelsMap.size() );
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[c80643] | 220 | LinkedCell::LinkedCell_View view = controller->getView(edgelength, *emptyset);
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[fe8253] | 221 | CPPUNIT_ASSERT_EQUAL( (size_t)1, controller->ModelsMap.size() );
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| 222 |
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| 223 | {
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| 224 | /// get a view at threshold and check that no new instance has been created
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[c80643] | 225 | LinkedCell::LinkedCell_View view_onlower = controller->getView(controller->lower_threshold, *emptyset);
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[fe8253] | 226 | CPPUNIT_ASSERT_EQUAL( (size_t)1, controller->ModelsMap.size() );
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| 227 | }
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| 228 | {
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| 229 | /// pick a view below 1.
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[c80643] | 230 | LinkedCell::LinkedCell_View view_beneathlower = controller->getView(0.1*controller->lower_threshold, *emptyset);
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[fe8253] | 231 | CPPUNIT_ASSERT_EQUAL( (size_t)1, controller->ModelsMap.size() );
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| 232 | }
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| 233 | }
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| 234 |
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| 235 | /** UnitTest for LinkedCell_Controller::getViewTest() for picking views above upper threshold.
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| 236 | */
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| 237 | void LinkedCell_ControllerTest::getView_UpperThresholdViewTest()
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| 238 | {
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| 239 | /// obtain a view
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| 240 | const double edgelength = controller->upper_threshold;
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| 241 | CPPUNIT_ASSERT_EQUAL( (size_t)0, controller->ModelsMap.size() );
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[c80643] | 242 | LinkedCell::LinkedCell_View view = controller->getView(edgelength, *emptyset);
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[fe8253] | 243 | CPPUNIT_ASSERT_EQUAL( (size_t)1, controller->ModelsMap.size() );
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| 244 |
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| 245 | {
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| 246 | /// get a view beyond threshold and check that no new instance has been created
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[c80643] | 247 | LinkedCell::LinkedCell_View view_beyondupper = controller->getView(1.1*controller->upper_threshold, *emptyset);
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[fe8253] | 248 | CPPUNIT_ASSERT_EQUAL( (size_t)1, controller->ModelsMap.size() );
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| 249 | }
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| 250 |
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| 251 | {
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| 252 | /// pick a view below threshold and check for new instance (if we make it outside acceptable range)
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| 253 | range<double> interval = controller->getHeuristicRange(edgelength);
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| 254 | if ( !interval.isInRange(0.1*controller->upper_threshold) ) {
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[c80643] | 255 | LinkedCell::LinkedCell_View view_beneathupper = controller->getView(0.1*controller->upper_threshold, *emptyset);
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[fe8253] | 256 | CPPUNIT_ASSERT_EQUAL( (size_t)2, controller->ModelsMap.size() );
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| 257 | }
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| 258 | }
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[fea945] | 259 | }
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[4a8169] | 260 |
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[ce81e76] | 261 | /** UnitTest for LinkedCell_Controller::updateModels().
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[4a8169] | 262 | */
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| 263 | void LinkedCell_ControllerTest::updateBoxTest()
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| 264 | {
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[69459d] | 265 | /// obtain a view
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| 266 | const double edgelength = controller->upper_threshold;
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| 267 | CPPUNIT_ASSERT_EQUAL( (size_t)0, controller->ModelsMap.size() );
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| 268 | LinkedCell::LinkedCell_View view = controller->getView(edgelength, *emptyset);
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| 269 | CPPUNIT_ASSERT_EQUAL( (size_t)1, controller->ModelsMap.size() );
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| 270 | const LinkedCell::LinkedCell_Model * const model = view.LC->getModel();
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| 271 |
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| 272 | /// change box matrix
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| 273 | domain->setM(*BoxM);
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| 274 |
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| 275 | /// check that model has changed
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| 276 | CPPUNIT_ASSERT( model != view.LC->getModel() );
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[4a8169] | 277 | }
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