#
# ChangeLog for src/Actions/FillAction/SuspendInMoleculeAction.cpp
#
# Generated by Trac 1.4.4
# Mar 20, 2025, 2:25:50 PM

Fri, 24 Jul 2015 16:44:34 GMT Frederik Heber <heber@…> [f01769]
	* src/Actions/AtomAction/ChangeElementAction.cpp (modified)
	* src/Actions/FillAction/FillRegularGridAction.cpp (modified)
	* src/Actions/FillAction/FillSurfaceAction.cpp (modified)
	* src/Actions/FillAction/SuspendInMoleculeAction.cpp (modified)
	* src/Actions/MoleculeAction/RemoveAction.cpp (modified)
	* src/Actions/SelectionAction/Atoms/AtomByIdAction.cpp (modified)
	* src/Actions/SelectionAction/Atoms/AtomByOrderAction.cpp (modified)
	* src/Actions/SelectionAction/Atoms/NotAtomByIdAction.cpp (modified)
	* src/Actions/SelectionAction/Atoms/NotAtomByOrderAction.cpp (modified)
	* src/Actions/TesselationAction/ConvexEnvelopeAction.cpp (modified)
	* src/Actions/WorldAction/RepeatBoxAction.cpp (modified)
	* src/Actions/WorldAction/RepeatBoxAction.def (modified)
	* src/Analysis/analysis_bonds.cpp (modified)
	* src/Analysis/analysis_correlation.cpp (modified)
	* src/Atom/AtomSet.hpp (modified)
	* src/Atom/atom_bondedparticle.cpp (modified)
	* src/Atom/atom_bondedparticle.hpp (modified)
	* src/AtomIdSet.cpp (modified)
	* src/AtomIdSet.hpp (modified)
	* src/Bond/BondInfo.cpp (modified)
	* src/Descriptors/unittests/AtomDescriptorUnitTest.cpp (modified)
	* src/Filling/unittests/ClusterUnitTest.cpp (modified)
	* src/Fragmentation/Fragmentation.cpp (modified)
	* src/Fragmentation/Graph.cpp (modified)
	* src/Fragmentation/Homology/HomologyGraph_getFromKeyset.cpp (modified)
	* src/Graph/AdjacencyList.cpp (modified)
	* src/Graph/BuildInducedSubgraph.cpp (modified)
	* src/Graph/BuildInducedSubgraph.hpp (modified)
	* src/Parameters/Specifics/Value_molecule.cpp (modified)
	* src/Parameters/StreamOperators.hpp (modified)
	* src/Parameters/Validators/Specific/AtomIdValidator.cpp (modified)
	* src/Parser/PdbParser.cpp (modified)
	* src/Parser/unittests/ParserTremoloUnitTest.cpp (modified)
	* src/Tesselation/boundary.cpp (modified)
	* src/UIElements/CommandLineUI/Query/AtomCommandLineQuery.cpp (modified)
	* src/UIElements/CommandLineUI/Query/AtomsCommandLineQuery.cpp (modified)
	* src/UIElements/CommandLineUI/Query/MoleculeCommandLineQuery.cpp (modified)
	* src/UIElements/Qt4/Query/AtomQtQuery.cpp (modified)
	* src/UIElements/Qt4/Query/MoleculeQtQuery.cpp (modified)
	* src/UIElements/TextUI/Query/AtomTextQuery.cpp (modified)
	* src/UIElements/TextUI/Query/AtomsTextQuery.cpp (modified)
	* src/UIElements/TextUI/Query/MoleculeTextQuery.cpp (modified)
	* src/UIElements/TextUI/Query/MoleculesTextQuery.cpp (modified)
	* src/UIElements/Views/Qt4/Qt3D/GLMoleculeObject_atom.cpp (modified)
	* src/UIElements/Views/Qt4/Qt3D/GLMoleculeObject_bond.cpp (modified)
	* src/UIElements/Views/Qt4/Qt3D/GLMoleculeObject_molecule.cpp (modified)
	* src/UIElements/Views/Qt4/Qt3D/GLWorldScene.cpp (modified)
	* src/UIElements/Views/Qt4/QtFragmentList.cpp (modified)
	* src/molecule.cpp (modified)
	* src/molecule.hpp (modified)
	* src/molecule_geometry.cpp (modified)
	* src/moleculelist.cpp (modified)
	* src/unittests/AtomIdSetUnitTest.cpp (modified)

	Replaced World::getAtom() wherever possible by const version.

	- ...


Fri, 24 Jul 2015 16:44:34 GMT Frederik Heber <heber@…> [1259df]
	* src/Actions/FillAction/FillVolumeAction.cpp (modified)
	* src/Actions/FillAction/SuspendInMoleculeAction.cpp (modified)
	* src/Actions/GraphAction/CreateAdjacencyAction.cpp (modified)
	* src/Actions/GraphAction/UpdateMoleculesAction.cpp (modified)
	* src/Actions/SelectionAction/Molecules/MoleculeByFormulaAction.cpp (modified)
	* src/Actions/SelectionAction/Molecules/MoleculeByFormulaAction.def (modified)
	* src/Actions/SelectionAction/Molecules/MoleculeByNameAction.cpp (modified)
	* src/Actions/SelectionAction/Molecules/MoleculeByNameAction.def (modified)
	* src/Actions/SelectionAction/Molecules/NotMoleculeByFormulaAction.cpp (modified)
	* src/Actions/SelectionAction/Molecules/NotMoleculeByFormulaAction.def (modified)
	* src/Actions/SelectionAction/Molecules/NotMoleculeByNameAction.cpp (modified)
	* src/Actions/SelectionAction/Molecules/NotMoleculeByNameAction.def (modified)
	* src/Actions/WorldAction/BoundInBoxAction.cpp (modified)
	* src/Actions/WorldAction/CenterInBoxAction.cpp (modified)
	* src/Actions/WorldAction/RepeatBoxAction.cpp (modified)
	* src/Actions/WorldAction/RepeatBoxAction.def (modified)
	* src/Descriptors/unittests/MoleculeDescriptorUnitTest.cpp (modified)
	* src/Parameters/Specifics/Value_molecule.cpp (modified)
	* src/UIElements/Qt4/Query/MoleculeQtQuery.cpp (modified)
	* src/UIElements/Views/Qt4/MoleculeList/QtMoleculeList.cpp (modified)
	* src/UIElements/Views/Qt4/MoleculeList/QtMoleculeListView.cpp (modified)
	* src/UIElements/Views/Qt4/Qt3D/GLWorldScene.cpp (modified)

	Replaced World::getAllMolecules() wherever possible by const version.


Mon, 02 Feb 2015 19:20:43 GMT Frederik Heber <heber@…> [ae75d3]
	* src/Actions/FillAction/SuspendInMoleculeAction.cpp (modified)

	MEMFIX: Mismatched delete[] in SuspendInMoleculeAction.


Wed, 14 Jan 2015 21:03:24 GMT Frederik Heber <heber@…> [2440ce]
	* src/Actions/FillAction/SuspendInMoleculeAction.cpp (modified)
	* src/Actions/FillAction/SuspendInMoleculeAction.def (modified)
	* tests/regression/Filling/SuspendInWater/pre/single_molecule.conf (added)
	* tests/regression/Filling/SuspendInWater/pre/test.conf (modified)
	* tests/regression/Filling/SuspendInWater/testsuite-suspend-in-water.at (modified)

	FIX: Changed SuspendInMoleculeAction to catch segfault when rho=1 was ...


Wed, 10 Sep 2014 19:10:26 GMT Frederik Heber <heber@…> [aa55d0]
	* src/Actions/FillAction/SuspendInMoleculeAction.cpp (added)
	* src/Actions/FillAction/SuspendInMoleculeAction.def (added)
	* src/Actions/FillAction/SuspendInMoleculeAction.hpp (added)
	* src/Actions/GlobalListOfActions.hpp (modified)
	* src/Actions/Makefile.am (modified)
	* src/Actions/MoleculeAction/SuspendInWaterAction.cpp (deleted)
	* src/Actions/MoleculeAction/SuspendInWaterAction.def (deleted)
	* src/Actions/MoleculeAction/SuspendInWaterAction.hpp (deleted)
	* tests/Python/AllActions/options.dat (modified)
	* tests/regression/Options/InvalidCommands/testsuite-options-invalid-commands.at (modified)

	Moved and renamed SuspendInWaterAction from Molecule.. to ...