ATOMSOURCE = atom.cpp atom_atominfo.cpp atom_bondedparticle.cpp atom_bondedparticleinfo.cpp atom_graphnode.cpp atom_graphnodeinfo.cpp atom_particleinfo.cpp atom_trajectoryparticle.cpp atom_trajectoryparticleinfo.cpp
ATOMHEADER = atom.hpp atom_atominfo.hpp atom_bondedparticle.hpp atom_bondedparticleinfo.hpp atom_graphnode.hpp atom_graphnodeinfo.hpp atom_particleinfo.hpp atom_trajectoryparticle.hpp atom_trajectoryparticleinfo.hpp

ANALYSISSOURCE = analysis_bonds.cpp analysis_correlation.cpp
ANALYSISHEADER = analysis_bonds.hpp analysis_correlation.hpp

ACTIONSSOURCE = Actions/Action.cpp Actions/MethodAction.cpp
ACTIONSHEADER = Actions/Action.hpp Actions/MethodAction.hpp

MENUSOURCE = ${ACTIONSSOURCE} Menu/Menu.cpp Menu/TextMenu.cpp Menu/MenuItem.cpp Menu/SubMenuItem.cpp Menu/ActionMenuItem.cpp Menu/SeperatorItem.cpp
MENUHEADER = ${ACTIONSHEADER} Menu/Menu.hpp Menu/TextMenu.hpp Menu/MenuItem.hpp Menu/SubMenuItem.hpp Menu/ActionMenuItem.hpp Menu/SeperatorItem.hpp

SOURCE = ${ANALYSISSOURCE} ${ATOMSOURCE} ${MENUSOURCE} bond.cpp bondgraph.cpp boundary.cpp config.cpp element.cpp ellipsoid.cpp errorlogger.cpp graph.cpp helpers.cpp leastsquaremin.cpp linkedcell.cpp log.cpp logger.cpp memoryusageobserver.cpp moleculelist.cpp molecule.cpp molecule_dynamics.cpp molecule_fragmentation.cpp molecule_geometry.cpp molecule_graph.cpp molecule_pointcloud.cpp parser.cpp periodentafel.cpp tesselation.cpp tesselationhelpers.cpp vector.cpp verbose.cpp menu.cpp
HEADER = ${ANALYSISHEADER} ${ATOMHEADER} ${MENUHEADER} bond.hpp bondgraph.hpp boundary.hpp config.hpp defs.hpp element.hpp ellipsoid.hpp errorlogger.hpp graph.hpp helpers.hpp leastsquaremin.hpp linkedcell.hpp lists.hpp log.hpp logger.hpp memoryallocator.hpp memoryusageobserver.hpp molecule.hpp molecule_template.hpp parser.hpp periodentafel.hpp stackclass.hpp tesselation.hpp tesselationhelpers.hpp vector.hpp verbose.hpp menu.hpp

BOOST_LIB = $(BOOST_LDFLAGS) $(BOOST_MPL_LIB)
INCLUDES = -I$(top_srcdir)/src/unittests

noinst_LIBRARIES = libmolecuilder.a
bin_PROGRAMS = molecuilder joiner analyzer
molecuilderdir = ${bindir}
libmolecuilder_a_SOURCES = ${SOURCE} ${HEADER}
molecuilder_DATA = elements.db valence.db orbitals.db Hbonddistance.db Hbondangle.db
molecuilder_LDFLAGS = $(BOOST_LIB)
molecuilder_SOURCES = builder.cpp
molecuilder_LDADD = libmolecuilder.a
joiner_SOURCES = joiner.cpp datacreator.cpp parser.cpp datacreator.hpp helpers.hpp parser.hpp periodentafel.hpp
joiner_LDADD = libmolecuilder.a 
analyzer_SOURCES = analyzer.cpp datacreator.cpp parser.cpp helpers.hpp periodentafel.hpp parser.hpp datacreator.hpp 
analyzer_LDADD = libmolecuilder.a 

#EXTRA_DIST = ${molecuilder_DATA}