Changeset ee86a0


Ignore:
Timestamp:
Jul 22, 2010, 2:07:55 PM (14 years ago)
Author:
Tillmann Crueger <crueger@…>
Branches:
Action_Thermostats, Add_AtomRandomPerturbation, Add_FitFragmentPartialChargesAction, Add_RotateAroundBondAction, Add_SelectAtomByNameAction, Added_ParseSaveFragmentResults, AddingActions_SaveParseParticleParameters, Adding_Graph_to_ChangeBondActions, Adding_MD_integration_tests, Adding_ParticleName_to_Atom, Adding_StructOpt_integration_tests, AtomFragments, Automaking_mpqc_open, AutomationFragmentation_failures, Candidate_v1.5.4, Candidate_v1.6.0, Candidate_v1.6.1, ChangeBugEmailaddress, ChangingTestPorts, ChemicalSpaceEvaluator, CombiningParticlePotentialParsing, Combining_Subpackages, Debian_Package_split, Debian_package_split_molecuildergui_only, Disabling_MemDebug, Docu_Python_wait, EmpiricalPotential_contain_HomologyGraph, EmpiricalPotential_contain_HomologyGraph_documentation, Enable_parallel_make_install, Enhance_userguide, Enhanced_StructuralOptimization, Enhanced_StructuralOptimization_continued, Example_ManyWaysToTranslateAtom, Exclude_Hydrogens_annealWithBondGraph, FitPartialCharges_GlobalError, Fix_BoundInBox_CenterInBox_MoleculeActions, Fix_ChargeSampling_PBC, Fix_ChronosMutex, Fix_FitPartialCharges, Fix_FitPotential_needs_atomicnumbers, Fix_ForceAnnealing, Fix_IndependentFragmentGrids, Fix_ParseParticles, Fix_ParseParticles_split_forward_backward_Actions, Fix_PopActions, Fix_QtFragmentList_sorted_selection, Fix_Restrictedkeyset_FragmentMolecule, Fix_StatusMsg, Fix_StepWorldTime_single_argument, Fix_Verbose_Codepatterns, Fix_fitting_potentials, Fixes, ForceAnnealing_goodresults, ForceAnnealing_oldresults, ForceAnnealing_tocheck, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_continued, ForceAnnealing_with_BondGraph_continued_betteresults, ForceAnnealing_with_BondGraph_contraction-expansion, FragmentAction_writes_AtomFragments, FragmentMolecule_checks_bonddegrees, GeometryObjects, Gui_Fixes, Gui_displays_atomic_force_velocity, ImplicitCharges, IndependentFragmentGrids, IndependentFragmentGrids_IndividualZeroInstances, IndependentFragmentGrids_IntegrationTest, IndependentFragmentGrids_Sole_NN_Calculation, JobMarket_RobustOnKillsSegFaults, JobMarket_StableWorkerPool, JobMarket_unresolvable_hostname_fix, MoreRobust_FragmentAutomation, ODR_violation_mpqc_open, PartialCharges_OrthogonalSummation, PdbParser_setsAtomName, PythonUI_with_named_parameters, QtGui_reactivate_TimeChanged_changes, Recreated_GuiChecks, Rewrite_FitPartialCharges, RotateToPrincipalAxisSystem_UndoRedo, SaturateAtoms_findBestMatching, SaturateAtoms_singleDegree, StoppableMakroAction, Subpackage_CodePatterns, Subpackage_JobMarket, Subpackage_LinearAlgebra, Subpackage_levmar, Subpackage_mpqc_open, Subpackage_vmg, Switchable_LogView, ThirdParty_MPQC_rebuilt_buildsystem, TrajectoryDependenant_MaxOrder, TremoloParser_IncreasedPrecision, TremoloParser_MultipleTimesteps, TremoloParser_setsAtomName, Ubuntu_1604_changes, stable
Children:
dc11c9
Parents:
23761b
Message:

Simplyfied formula parsing using range objects

File:
1 edited

Legend:

Unmodified
Added
Removed
  • src/Formula.cpp

    r23761b ree86a0  
    1414#include "element.hpp"
    1515#include "Helpers/Assert.hpp"
     16#include "Helpers/Range.hpp"
    1617
    1718using namespace std;
     
    5354}
    5455
    55 // quick function used for parsing
    56 bool isInRange(pair<char,char> range,char character){
    57   return range.first<=character && character<=range.second;
    58 }
    59 
    6056void Formula::fromString(const std::string &formula) throw(ParseError){
    6157  // some constants needed for parsing... Assumes ASCII, change if other encodings are used
    62   static const pair<char,char> CapitalLetters = make_pair('A','Z');
    63   static const pair<char,char> SmallLetters = make_pair('a','z');
    64   static const pair<char,char> Numbers = make_pair('0','9');
     58  static const range<char> CapitalLetters = makeRange('A',static_cast<char>('Z'+1));
     59  static const range<char> SmallLetters = makeRange('a',static_cast<char>('z'+1));
     60  static const range<char> Numbers = makeRange('0',static_cast<char>('9'+1));
    6561  // clean the formula
    6662  clear();
     
    6965    string shorthand;
    7066    // Atom names start with a capital letter
    71     if(!isInRange(CapitalLetters,(*it)))
     67    if(!CapitalLetters.isInRange(*it))
    7268      throw(ParseError(__FILE__,__LINE__));
    7369    shorthand+=(*it++);
    7470    // the rest of the name follows
    75     while(it!=end && isInRange(SmallLetters,(*it)))
     71    while(it!=end && SmallLetters.isInRange(*it))
    7672      shorthand+=(*it++);
    7773    // now we can count the occurences
    7874    int count = 0;
    79     while(it!=end && isInRange(Numbers,(*it)))
     75    while(it!=end && Numbers.isInRange(*it))
    8076      count = (count*10) + ((*it++)-Numbers.first);
    8177    // one is implicit
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