Changeset ee86a0
- Timestamp:
- Jul 22, 2010, 2:07:55 PM (14 years ago)
- Branches:
- Action_Thermostats, Add_AtomRandomPerturbation, Add_FitFragmentPartialChargesAction, Add_RotateAroundBondAction, Add_SelectAtomByNameAction, Added_ParseSaveFragmentResults, AddingActions_SaveParseParticleParameters, Adding_Graph_to_ChangeBondActions, Adding_MD_integration_tests, Adding_ParticleName_to_Atom, Adding_StructOpt_integration_tests, AtomFragments, Automaking_mpqc_open, AutomationFragmentation_failures, Candidate_v1.5.4, Candidate_v1.6.0, Candidate_v1.6.1, ChangeBugEmailaddress, ChangingTestPorts, ChemicalSpaceEvaluator, CombiningParticlePotentialParsing, Combining_Subpackages, Debian_Package_split, Debian_package_split_molecuildergui_only, Disabling_MemDebug, Docu_Python_wait, EmpiricalPotential_contain_HomologyGraph, EmpiricalPotential_contain_HomologyGraph_documentation, Enable_parallel_make_install, Enhance_userguide, Enhanced_StructuralOptimization, Enhanced_StructuralOptimization_continued, Example_ManyWaysToTranslateAtom, Exclude_Hydrogens_annealWithBondGraph, FitPartialCharges_GlobalError, Fix_BoundInBox_CenterInBox_MoleculeActions, Fix_ChargeSampling_PBC, Fix_ChronosMutex, Fix_FitPartialCharges, Fix_FitPotential_needs_atomicnumbers, Fix_ForceAnnealing, Fix_IndependentFragmentGrids, Fix_ParseParticles, Fix_ParseParticles_split_forward_backward_Actions, Fix_PopActions, Fix_QtFragmentList_sorted_selection, Fix_Restrictedkeyset_FragmentMolecule, Fix_StatusMsg, Fix_StepWorldTime_single_argument, Fix_Verbose_Codepatterns, Fix_fitting_potentials, Fixes, ForceAnnealing_goodresults, ForceAnnealing_oldresults, ForceAnnealing_tocheck, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_continued, ForceAnnealing_with_BondGraph_continued_betteresults, ForceAnnealing_with_BondGraph_contraction-expansion, FragmentAction_writes_AtomFragments, FragmentMolecule_checks_bonddegrees, GeometryObjects, Gui_Fixes, Gui_displays_atomic_force_velocity, ImplicitCharges, IndependentFragmentGrids, IndependentFragmentGrids_IndividualZeroInstances, IndependentFragmentGrids_IntegrationTest, IndependentFragmentGrids_Sole_NN_Calculation, JobMarket_RobustOnKillsSegFaults, JobMarket_StableWorkerPool, JobMarket_unresolvable_hostname_fix, MoreRobust_FragmentAutomation, ODR_violation_mpqc_open, PartialCharges_OrthogonalSummation, PdbParser_setsAtomName, PythonUI_with_named_parameters, QtGui_reactivate_TimeChanged_changes, Recreated_GuiChecks, Rewrite_FitPartialCharges, RotateToPrincipalAxisSystem_UndoRedo, SaturateAtoms_findBestMatching, SaturateAtoms_singleDegree, StoppableMakroAction, Subpackage_CodePatterns, Subpackage_JobMarket, Subpackage_LinearAlgebra, Subpackage_levmar, Subpackage_mpqc_open, Subpackage_vmg, Switchable_LogView, ThirdParty_MPQC_rebuilt_buildsystem, TrajectoryDependenant_MaxOrder, TremoloParser_IncreasedPrecision, TremoloParser_MultipleTimesteps, TremoloParser_setsAtomName, Ubuntu_1604_changes, stable
- Children:
- dc11c9
- Parents:
- 23761b
- File:
-
- 1 edited
Legend:
- Unmodified
- Added
- Removed
-
src/Formula.cpp
r23761b ree86a0 14 14 #include "element.hpp" 15 15 #include "Helpers/Assert.hpp" 16 #include "Helpers/Range.hpp" 16 17 17 18 using namespace std; … … 53 54 } 54 55 55 // quick function used for parsing56 bool isInRange(pair<char,char> range,char character){57 return range.first<=character && character<=range.second;58 }59 60 56 void Formula::fromString(const std::string &formula) throw(ParseError){ 61 57 // some constants needed for parsing... Assumes ASCII, change if other encodings are used 62 static const pair<char,char> CapitalLetters = make_pair('A','Z');63 static const pair<char,char> SmallLetters = make_pair('a','z');64 static const pair<char,char> Numbers = make_pair('0','9');58 static const range<char> CapitalLetters = makeRange('A',static_cast<char>('Z'+1)); 59 static const range<char> SmallLetters = makeRange('a',static_cast<char>('z'+1)); 60 static const range<char> Numbers = makeRange('0',static_cast<char>('9'+1)); 65 61 // clean the formula 66 62 clear(); … … 69 65 string shorthand; 70 66 // Atom names start with a capital letter 71 if(! isInRange(CapitalLetters,(*it)))67 if(!CapitalLetters.isInRange(*it)) 72 68 throw(ParseError(__FILE__,__LINE__)); 73 69 shorthand+=(*it++); 74 70 // the rest of the name follows 75 while(it!=end && isInRange(SmallLetters,(*it)))71 while(it!=end && SmallLetters.isInRange(*it)) 76 72 shorthand+=(*it++); 77 73 // now we can count the occurences 78 74 int count = 0; 79 while(it!=end && isInRange(Numbers,(*it)))75 while(it!=end && Numbers.isInRange(*it)) 80 76 count = (count*10) + ((*it++)-Numbers.first); 81 77 // one is implicit
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