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  • src/molecule.hpp

    ref7d30 rc550dd  
    2929#include <string>
    3030
    31 #include "types.hpp"
     31#include "defs.hpp"
    3232#include "graph.hpp"
    3333#include "stackclass.hpp"
     
    5353class periodentafel;
    5454class Vector;
     55class Shape;
    5556
    5657/******************************** Some definitions for easier reading **********************************/
     
    279280  void SetBoxDimension(Vector *dim);
    280281  void ScanForPeriodicCorrection();
    281   bool VerletForceIntegration(char *file, config &configuration, const size_t offset);
     282  bool VerletForceIntegration(char *file, config &configuration);
    282283  void Thermostats(config &configuration, double ActualTemp, int Thermostat);
    283284  void PrincipalAxisSystem(bool DoRotate);
     
    316317
    317318  molecule *CopyMolecule();
    318   molecule* CopyMoleculeFromSubRegion(const Vector offset, const double *parallelepiped) const;
     319  molecule* CopyMoleculeFromSubRegion(const Shape&) const;
    319320
    320321  /// Fragment molecule by two different approaches:
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