Changeset a7b777c


Ignore:
Timestamp:
Jul 28, 2010, 1:01:02 PM (14 years ago)
Author:
Tillmann Crueger <crueger@…>
Branches:
Action_Thermostats, Add_AtomRandomPerturbation, Add_FitFragmentPartialChargesAction, Add_RotateAroundBondAction, Add_SelectAtomByNameAction, Added_ParseSaveFragmentResults, AddingActions_SaveParseParticleParameters, Adding_Graph_to_ChangeBondActions, Adding_MD_integration_tests, Adding_ParticleName_to_Atom, Adding_StructOpt_integration_tests, AtomFragments, Automaking_mpqc_open, AutomationFragmentation_failures, Candidate_v1.5.4, Candidate_v1.6.0, Candidate_v1.6.1, ChangeBugEmailaddress, ChangingTestPorts, ChemicalSpaceEvaluator, CombiningParticlePotentialParsing, Combining_Subpackages, Debian_Package_split, Debian_package_split_molecuildergui_only, Disabling_MemDebug, Docu_Python_wait, EmpiricalPotential_contain_HomologyGraph, EmpiricalPotential_contain_HomologyGraph_documentation, Enable_parallel_make_install, Enhance_userguide, Enhanced_StructuralOptimization, Enhanced_StructuralOptimization_continued, Example_ManyWaysToTranslateAtom, Exclude_Hydrogens_annealWithBondGraph, FitPartialCharges_GlobalError, Fix_BoundInBox_CenterInBox_MoleculeActions, Fix_ChargeSampling_PBC, Fix_ChronosMutex, Fix_FitPartialCharges, Fix_FitPotential_needs_atomicnumbers, Fix_ForceAnnealing, Fix_IndependentFragmentGrids, Fix_ParseParticles, Fix_ParseParticles_split_forward_backward_Actions, Fix_PopActions, Fix_QtFragmentList_sorted_selection, Fix_Restrictedkeyset_FragmentMolecule, Fix_StatusMsg, Fix_StepWorldTime_single_argument, Fix_Verbose_Codepatterns, Fix_fitting_potentials, Fixes, ForceAnnealing_goodresults, ForceAnnealing_oldresults, ForceAnnealing_tocheck, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_continued, ForceAnnealing_with_BondGraph_continued_betteresults, ForceAnnealing_with_BondGraph_contraction-expansion, FragmentAction_writes_AtomFragments, FragmentMolecule_checks_bonddegrees, GeometryObjects, Gui_Fixes, Gui_displays_atomic_force_velocity, ImplicitCharges, IndependentFragmentGrids, IndependentFragmentGrids_IndividualZeroInstances, IndependentFragmentGrids_IntegrationTest, IndependentFragmentGrids_Sole_NN_Calculation, JobMarket_RobustOnKillsSegFaults, JobMarket_StableWorkerPool, JobMarket_unresolvable_hostname_fix, MoreRobust_FragmentAutomation, ODR_violation_mpqc_open, PartialCharges_OrthogonalSummation, PdbParser_setsAtomName, PythonUI_with_named_parameters, QtGui_reactivate_TimeChanged_changes, Recreated_GuiChecks, Rewrite_FitPartialCharges, RotateToPrincipalAxisSystem_UndoRedo, SaturateAtoms_findBestMatching, SaturateAtoms_singleDegree, StoppableMakroAction, Subpackage_CodePatterns, Subpackage_JobMarket, Subpackage_LinearAlgebra, Subpackage_levmar, Subpackage_mpqc_open, Subpackage_vmg, Switchable_LogView, ThirdParty_MPQC_rebuilt_buildsystem, TrajectoryDependenant_MaxOrder, TremoloParser_IncreasedPrecision, TremoloParser_MultipleTimesteps, TremoloParser_setsAtomName, Ubuntu_1604_changes, stable
Children:
2ad482, 4c9a97, 9106c6
Parents:
677e13 (diff), b2d8d0 (diff)
Note: this is a merge changeset, the changes displayed below correspond to the merge itself.
Use the (diff) links above to see all the changes relative to each parent.
Message:

Merge branch 'stable' into StructureRefactoring

Location:
src
Files:
2 added
7 edited

Legend:

Unmodified
Added
Removed
  • src/Actions/Action.cpp

    r677e13 ra7b777c  
    3434{
    3535  if(_doRegister){
    36     ActionRegistry::getInstance().registerAction(this);
     36    ActionRegistry::getInstance().registerInstance(this);
    3737  }
    3838}
  • src/Actions/ActionRegistry.cpp

    r677e13 ra7b777c  
    11/*
    2  * ActionRegistry.cpp
     2 * Registry<Action>.cpp
    33 *
    44 *  Created on: Jan 7, 2010
     
    99
    1010#include "Actions/ActionRegistry.hpp"
    11 #include "Actions/Action.hpp"
    12 
    1311#include "Patterns/Singleton_impl.hpp"
    14 
    15 #include <string>
    16 #include "Helpers/Assert.hpp"
    17 #include <iostream>
    18 
    19 using namespace std;
     12#include "Patterns/Registry_impl.hpp"
    2013
    2114/** Constructor for class ActionRegistry.
    2215 */
    2316ActionRegistry::ActionRegistry()
    24 {
    25 }
     17{}
    2618
    2719/** Destructor for class ActionRegistry.
    2820 */
    2921ActionRegistry::~ActionRegistry()
     22{}
     23
     24/** Just passes on call to Registry<Action>::getByName().
     25 * \param name name of Action
     26 * \return pointer to Action
     27 */
     28Action* ActionRegistry::getActionByName(const std::string name)
    3029{
    31   map<const string,Action*>::iterator iter;
    32   for(iter=actionMap.begin();iter!=actionMap.end();++iter) {
    33     delete iter->second;
    34   }
    35   actionMap.clear();
     30  return getByName(name);
    3631}
    3732
    38 /** Returns pointer to an action named by \a name.
    39  * \param name name of action
    40  * \return pointer to Action
     33/** Just passes on call to Registry<Action>::isPresentByName().
     34 * \param name name of Action
     35 * \return true - Action instance present, false - not
    4136 */
    42 Action* ActionRegistry::getActionByName(const std::string name){
    43   map<const string,Action*>::iterator iter;
    44   iter = actionMap.find(name);
    45   ASSERT(iter!=actionMap.end(),"Query for an action not stored in registry");
    46   return iter->second;
     37bool ActionRegistry::isActionPresentByName(const std::string name)
     38{
     39  return isPresentByName(name);
    4740}
    4841
    49 /** States whether action is present or not.
    50  * \note This iss needed as ActionRegistry::getActionByName() ASSERT()s that action is in map.
    51  * \param name name of action
    52  * \return true - Action present, false - Action absent
    53  */
    54 bool ActionRegistry::isActionByNamePresent(const std::string name){
    55   map<const string,Action*>::iterator iter;
    56   iter = actionMap.find(name);
    57   return iter!=actionMap.end();
    58 }
    59 
    60 /** Registers an Action with the ActionRegistry.
    61  * \param *action pointer to Action.
    62  */
    63 void ActionRegistry::registerAction(Action* action){
    64   pair<map<const string,Action*>::iterator,bool> ret;
    65   //cout << "Trying to register action with name " << action->getName() << "." << endl;
    66   ret = actionMap.insert(pair<const string,Action*>(action->getName(),action));
    67   ASSERT(ret.second,"Two actions with the same name added to registry");
    68 }
    69 
    70 /** Unregisters an Action.
    71  * \param *action pointer to Action.
    72  */
    73 void ActionRegistry::unregisterAction(Action* action){
    74   //cout << "Unregistering action with name " << action->getName() << "." << endl;
    75   actionMap.erase(action->getName());
    76 }
    77 
    78 /** Returns an iterator pointing to the start of the map of Action's.
    79  * \return begin iterator
    80  */
    81 std::map<const std::string,Action*>::iterator ActionRegistry::getBeginIter()
    82 {
    83   return actionMap.begin();
    84 }
    85 
    86 /** Returns an iterator pointing to the end of the map of Action's.
    87  * \return end iterator
    88  */
    89 std::map<const std::string,Action*>::iterator ActionRegistry::getEndIter()
    90 {
    91   return actionMap.end();
    92 }
    93 
    94 /** Returns a const iterator pointing to the start of the map of Action's.
    95  * \return constant begin iterator
    96  */
    97 std::map<const std::string,Action*>::const_iterator ActionRegistry::getBeginIter() const
    98 {
    99   return actionMap.begin();
    100 }
    101 
    102 /** Returns a const iterator pointing to the end of the map of Action's.
    103  * \return constant end iterator
    104  */
    105 std::map<const std::string,Action*>::const_iterator ActionRegistry::getEndIter() const
    106 {
    107   return actionMap.end();
    108 }
    109 
    110 /** Prints the contents of the ActionRegistry \a &m to \a &ost.
    111  * \param &ost output stream
    112  * \param &m reference to ActionRegistry
    113  * \return reference to the above out stream for concatenation
    114  */
    115 ostream& operator<<(ostream& ost, const ActionRegistry& m)
    116 {
    117   ost << "ActionRegistry contains:" << endl;
    118   for (std::map<const std::string,Action*>::const_iterator iter = m.getBeginIter(); iter != m.getEndIter(); ++iter) {
    119     ost << "\t" << iter->first << " with pointer " << iter->second << endl;
    120   }
    121   return ost;
    122 };
    123 
    124 
    125 
    12642CONSTRUCT_SINGLETON(ActionRegistry)
     43CONSTRUCT_REGISTRY(Action)
  • src/Actions/ActionRegistry.hpp

    r677e13 ra7b777c  
    11/*
    2  * ActionRegistry.hpp
     2 * Registry<Action>.hpp
    33 *
    44 *  Created on: Jan 7, 2010
     
    1313#include <map>
    1414
     15#include "Patterns/Registry.hpp"
    1516#include "Patterns/Singleton.hpp"
     17#include "Actions/Action.hpp"
    1618
    17 class Action;
    18 
    19 class ActionRegistry : public Singleton<ActionRegistry>
     19/** Action Registry.
     20 *
     21 * The Action registry is a storage for any Action instance to retrieved by name.
     22 * It is a singleton and can be called from anywhere.
     23 *
     24 */
     25class ActionRegistry : public Singleton<ActionRegistry>, public Registry<Action>
    2026{
    2127  friend class Singleton<ActionRegistry>;
     28  //friend class Registry<Action>;
     29
    2230public:
    23   Action* getActionByName(const std::string);
    24   bool isActionByNamePresent(const std::string name);
    25   void registerAction(Action*);
    26   void unregisterAction(Action*);
    27 
    28   std::map<const std::string,Action*>::iterator getBeginIter();
    29   std::map<const std::string,Action*>::const_iterator getBeginIter() const;
    30   std::map<const std::string,Action*>::iterator getEndIter();
    31   std::map<const std::string,Action*>::const_iterator getEndIter() const;
    32 
    33 private:
    34   std::map<const std::string,Action*> actionMap;
     31  Action* getActionByName(const std::string name);
     32  bool isActionPresentByName(const std::string name);
    3533
    3634private:
    3735  ActionRegistry();
    38   virtual ~ActionRegistry();
     36  ~ActionRegistry();
    3937};
    4038
    41 std::ostream& operator<<(std::ostream& ost, const ActionRegistry& m);
    42 
    4339#endif /* ACTIONREGISTRY_HPP_ */
  • src/Descriptors/MoleculeNameDescriptor.cpp

    r677e13 ra7b777c  
    3030
    3131molecule *MoleculeNameDescriptor_impl::find(){
    32   World::MoleculeSet molecules = getMolecules();
     32  World::MoleculeSet &molecules = getMolecules();
    3333  World::MoleculeSet::iterator res = molecules.begin();
    3434  for (; res != molecules.end(); res++)
  • src/Descriptors/MoleculePtrDescriptor.cpp

    r677e13 ra7b777c  
    3434
    3535molecule *MoleculePtrDescriptor_impl::find(){
    36   World::MoleculeSet molecules = getMolecules();
     36  World::MoleculeSet &molecules = getMolecules();
    3737  World::MoleculeSet::iterator res = molecules.find(ptr->getId());
    3838  return (res!=molecules.end())?((*res).second):0;
  • src/Patterns/ObservedContainer_impl.hpp

    r677e13 ra7b777c  
    1717
    1818template <class Container>
    19 inline ObservedContainer<Container>::ObservedContainer(const ObservedContainer &src) :
     19inline ObservedContainer<Container>::ObservedContainer(const ObservedContainer<Container> &src) :
    2020  content(src.content),
    2121  obs(src.obs)
     
    2929inline
    3030ObservedContainer<Container>&
    31 ObservedContainer<Container>::operator=(const ObservedContainer &rhs){
     31ObservedContainer<Container>::operator=(const ObservedContainer<Container> &rhs){
    3232  content=rhs.content;
    3333  return *this;
  • src/UIElements/CommandLineUI/CommandLineWindow.cpp

    r677e13 ra7b777c  
    4444  for (std::list<std::string>::iterator CommandRunner = CommandLineParser::getInstance().SequenceOfActions.begin(); CommandRunner != CommandLineParser::getInstance().SequenceOfActions.end(); ++CommandRunner) {
    4545    cout << "Checking presence of " << *CommandRunner << ": ";
    46     if (ActionRegistry::getInstance().isActionByNamePresent(*CommandRunner)) {
     46    if (ActionRegistry::getInstance().isActionPresentByName(*CommandRunner)) {
    4747      cout << "calling " << *CommandRunner << endl;
    4848      ActionRegistry::getInstance().getActionByName(*CommandRunner)->call();
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