Changeset a576eb for src/Fragmentation/SetValues/unittests

Timestamp:

Dec 13, 2012, 10:05:42 AM (12 years ago)

Author:

Frederik Heber <heber@…>

Branches:

Action_Thermostats, Add_AtomRandomPerturbation, Add_FitFragmentPartialChargesAction, Add_RotateAroundBondAction, Add_SelectAtomByNameAction, Added_ParseSaveFragmentResults, AddingActions_SaveParseParticleParameters, Adding_Graph_to_ChangeBondActions, Adding_MD_integration_tests, Adding_ParticleName_to_Atom, Adding_StructOpt_integration_tests, AtomFragments, Automaking_mpqc_open, AutomationFragmentation_failures, Candidate_v1.5.4, Candidate_v1.6.0, Candidate_v1.6.1, ChangeBugEmailaddress, ChangingTestPorts, ChemicalSpaceEvaluator, CombiningParticlePotentialParsing, Combining_Subpackages, Debian_Package_split, Debian_package_split_molecuildergui_only, Disabling_MemDebug, Docu_Python_wait, EmpiricalPotential_contain_HomologyGraph, EmpiricalPotential_contain_HomologyGraph_documentation, Enable_parallel_make_install, Enhance_userguide, Enhanced_StructuralOptimization, Enhanced_StructuralOptimization_continued, Example_ManyWaysToTranslateAtom, Exclude_Hydrogens_annealWithBondGraph, FitPartialCharges_GlobalError, Fix_BoundInBox_CenterInBox_MoleculeActions, Fix_ChargeSampling_PBC, Fix_ChronosMutex, Fix_FitPartialCharges, Fix_FitPotential_needs_atomicnumbers, Fix_ForceAnnealing, Fix_IndependentFragmentGrids, Fix_ParseParticles, Fix_ParseParticles_split_forward_backward_Actions, Fix_PopActions, Fix_QtFragmentList_sorted_selection, Fix_Restrictedkeyset_FragmentMolecule, Fix_StatusMsg, Fix_StepWorldTime_single_argument, Fix_Verbose_Codepatterns, Fix_fitting_potentials, Fixes, ForceAnnealing_goodresults, ForceAnnealing_oldresults, ForceAnnealing_tocheck, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_continued, ForceAnnealing_with_BondGraph_continued_betteresults, ForceAnnealing_with_BondGraph_contraction-expansion, FragmentAction_writes_AtomFragments, FragmentMolecule_checks_bonddegrees, GeometryObjects, Gui_Fixes, Gui_displays_atomic_force_velocity, ImplicitCharges, IndependentFragmentGrids, IndependentFragmentGrids_IndividualZeroInstances, IndependentFragmentGrids_IntegrationTest, IndependentFragmentGrids_Sole_NN_Calculation, JobMarket_RobustOnKillsSegFaults, JobMarket_StableWorkerPool, JobMarket_unresolvable_hostname_fix, MoreRobust_FragmentAutomation, ODR_violation_mpqc_open, PartialCharges_OrthogonalSummation, PdbParser_setsAtomName, PythonUI_with_named_parameters, QtGui_reactivate_TimeChanged_changes, Recreated_GuiChecks, Rewrite_FitPartialCharges, RotateToPrincipalAxisSystem_UndoRedo, SaturateAtoms_findBestMatching, SaturateAtoms_singleDegree, StoppableMakroAction, Subpackage_CodePatterns, Subpackage_JobMarket, Subpackage_LinearAlgebra, Subpackage_levmar, Subpackage_mpqc_open, Subpackage_vmg, Switchable_LogView, ThirdParty_MPQC_rebuilt_buildsystem, TrajectoryDependenant_MaxOrder, TremoloParser_IncreasedPrecision, TremoloParser_MultipleTimesteps, TremoloParser_setsAtomName, Ubuntu_1604_changes, stable

Children:

79ac03

Parents:

e33bac

git-author:

Frederik Heber <heber@…> (09/27/12 14:41:06)

git-committer:

Frederik Heber <heber@…> (12/13/12 10:05:42)

Message:

Added serialization capability to Fragment.

• also added unit test function on this.

Location:

src/Fragmentation/SetValues/unittests

Files:

• FragmentUnitTest.cpp (modified) (3 diffs)
• FragmentUnitTest.hpp (modified) (2 diffs)
• Makefile.am (modified) (1 diff)

src/Fragmentation/SetValues/unittests/FragmentUnitTest.cpp

@@ -39 +39 @@
 #include <cppunit/ui/text/TestRunner.h>
 
+// include headers that implement a archive in simple text format
+#include <boost/archive/text_oarchive.hpp>
+#include <boost/archive/text_iarchive.hpp>
+
 #include "FragmentUnitTest.hpp"
 
@@ -46 +50 @@
 #include <boost/assign.hpp>
 #include <boost/foreach.hpp>
+
+#include <sstream>
 
 #include "CodePatterns/Assert.hpp"
@@ -480 +486 @@
   }
 }
+
+
+
+/** UnitTest for serialization
+ */
+void FragmentTest::serializeTest()
+{
+  // serialize
+  std::stringstream outputstream;
+  boost::archive::text_oarchive oa(outputstream);
+  oa << fragment;
+
+  // deserialize
+  Fragment *samefragment = NULL;
+  std::stringstream returnstream(outputstream.str());
+  boost::archive::text_iarchive ia(returnstream);
+  ia >> samefragment;
+
+  CPPUNIT_ASSERT( *fragment == *samefragment );
+
+  delete samefragment;
+}

src/Fragmentation/SetValues/unittests/FragmentUnitTest.hpp

@@ -34 +34 @@
     CPPUNIT_TEST ( operatorMinusEqual_NonOverlapping_Test );
     CPPUNIT_TEST ( operatorMinusEqual_Test );
+    CPPUNIT_TEST ( serializeTest );
     CPPUNIT_TEST_SUITE_END();
 
@@ -49 +50 @@
       void operatorMinusEqual_NonOverlapping_Test();
       void operatorMinusEqual_Test();
+      void serializeTest();
 
 private:

src/Fragmentation/SetValues/unittests/Makefile.am

@@ -29 +29 @@
         ../Fragmentation/SetValues/unittests/FragmentUnitTest.cpp \
         ../Fragmentation/SetValues/unittests/FragmentUnitTest.hpp
-FragmentUnitTest_LDADD = ${FRAGMENTATIONSETVALUESLIBS}
+FragmentUnitTest_LDADD = \
+        ${FRAGMENTATIONSETVALUESLIBS} \
+        $(BOOST_SERIALIZATION_LDFLAGS) $(BOOST_SERIALIZATION_LIBS)
+        
 
 HistogramUnitTest_SOURCES = $(top_srcdir)/src/unittests/UnitTestMain.cpp \