Changes in src/builder.cpp [f4d063:750cff]

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src/builder.cpp

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  */
 
-/*! \page Copyright notice
- *
- *  MoleCuilder - to create and alter molecular systems
- *  Copyright (C) 2010  University Bonn. All rights reserved.
- *
- */
-
-/*! \mainpage MoleCuilder - a molecular set builder
- *
- * This introductory shall briefly make acquainted with the program, helping in installing and a first run.
- *
- * \section about About the Program
- *
- *  MoleCuilder is a program, written entirely in C++, that enables the construction of a coordinate set for the
- *  atoms making up an molecule. It allows for both building of simple molecules by adding atom-wise giving bond
- *  angles and distances or absolute coordinates, but also using them as templates. Regions can be specified and
- *  ordered to be filled with a molecule in a certain manner. Greater conglomerations of molecules can be tesselated
- *  and recognized as a region themselves to be subsequently surrounded by other (surface solvated) molecules.
- *  In the end, MoleCuilder allows the construction of arbitrary nano structures, whether they be crystalline or
- *  amorphic in nature.
- *
- *
- * \section install Installation
- *
- *  Installation should without problems succeed as follows:
- *  -# ./configure (or: mkdir build;mkdir run;cd build; ../configure --bindir=../run)
- *  -# make
- *  -# make install
- *
- *  Further useful commands are
- *  -# make clean uninstall: deletes .o-files and removes executable from the given binary directory\n
- *  -# make doxygen-doc: Creates these html pages out of the documented source
- *  -# make check: Runs an extensive set of unit tests and a testsuite which also gives a good overview on the set of
- *                 functions.
- *
- * \section run Running
- *
- *  The program can be executed by running: ./molecuilder
- *
- *  MoleCuilder has three interfaces at your disposal:
- *  -# Textmenu: A simple interactive console-based menu, where awaits your choices and inputs in order to set atoms
- *               as you like
- *  -# CommandLineUI: Every command can also be chained up as a sequence of actions on the command line to be executed
- *               with any user interaction.
- *  -# GraphicalUI: A graphical user interface that also display the molecular structure being built and lots of other
- *               informations to ease the construction of bigger geometries.
- *
- *  The supported output formats right now are:
- *  -# mpqc: Configuration files of the Massively Parallel Quantum Chemistry package (Sandia labs)
- *  -# pcp: Configuration files of the Parallel Car-Parrinello program (Institute for Numerical Simulation)
- *  -# tremolo: Configuration files of TREMOLO (Institute for Numerical Simulation)
- *  -# xyz: the most basic format for the 3d arrangement of atoms consisting of a list of element and 3 coordinates.
- *
- */
 
 // include config.h