1 | ### 5. (un)select atoms by element
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2 |
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3 |
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4 | # select element by atomic number: 1, 4
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5 | AT_SETUP([Unselection - All atoms with specific element by atomic number])
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6 | AT_KEYWORDS([unselection atom element unselect-atom-by-element])
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7 |
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8 | file=test-H_present.xyz
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9 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/pre/test.xyz $file], 0)
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10 | AT_CHECK([chmod u+w $file], 0)
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11 | AT_CHECK([../../molecuilder -i $file -v 3 --select-all-atoms --unselect-atom-by-element 1 -r], 0, [stdout], [stderr])
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12 | AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/post/test-H_present.xyz], 0, [ignore], [ignore])
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13 |
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14 | file=test-Be_present.xyz
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15 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/pre/test.xyz $file], 0)
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16 | AT_CHECK([chmod u+w $file], 0)
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17 | AT_CHECK([../../molecuilder -i $file -v 3 --select-all-atoms --unselect-atom-by-element 4 -r], 0, [stdout], [stderr])
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18 | AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/post/test-Be_present.xyz], 0, [ignore], [ignore])
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19 |
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20 | AT_CLEANUP
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21 |
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22 |
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23 | AT_SETUP([Unselection - All atoms with specific element by symbol with Undo])
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24 | AT_KEYWORDS([unselection atom element unselect-atom-by-element undo])
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25 |
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26 | file=test.xyz
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27 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/pre/test.xyz $file], 0)
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28 | AT_CHECK([chmod u+w $file], 0)
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29 | AT_CHECK([../../molecuilder -i $file -v 3 --select-all-atoms --unselect-atom-by-element 1 --undo -r], 0, [stdout], [stderr])
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30 | AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/post/empty.xyz], 0, [ignore], [ignore])
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31 |
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32 | file=test.xyz
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33 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/pre/test.xyz $file], 0)
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34 | AT_CHECK([chmod u+w $file], 0)
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35 | AT_CHECK([../../molecuilder -i $file -v 3 --select-all-atoms --unselect-atom-by-element 4 --undo -r], 0, [stdout], [stderr])
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36 | AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/post/empty.xyz], 0, [ignore], [ignore])
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37 |
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38 | AT_CLEANUP
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39 |
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40 | AT_SETUP([Unselection - All atoms with specific element by symbol with Redo])
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41 | AT_KEYWORDS([unselection atom element unselect-atom-by-element redo])
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42 |
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43 | file=test-H_present.xyz
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44 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/pre/test.xyz $file], 0)
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45 | AT_CHECK([chmod u+w $file], 0)
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46 | AT_CHECK([../../molecuilder -i $file -v 3 --select-all-atoms --unselect-atom-by-element 1 --undo --redo -r], 0, [stdout], [stderr])
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47 | AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/post/test-H_present.xyz], 0, [ignore], [ignore])
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48 |
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49 | file=test-Be_present.xyz
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50 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/pre/test.xyz $file], 0)
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51 | AT_CHECK([chmod u+w $file], 0)
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52 | AT_CHECK([../../molecuilder -i $file -v 3 --select-all-atoms --unselect-atom-by-element 4 --undo --redo -r], 0, [stdout], [stderr])
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53 | AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/post/test-Be_present.xyz], 0, [ignore], [ignore])
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54 |
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55 | AT_CLEANUP |
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