1 | #
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2 | # MoleCuilder - creates and alters molecular systems
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3 | # Copyright (C) 2008-2012 University of Bonn
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4 | #
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5 | # This program is free software: you can redistribute it and/or modify
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6 | # it under the terms of the GNU General Public License as published by
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7 | # the Free Software Foundation, either version 3 of the License, or
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8 | # (at your option) any later version.
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9 | #
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10 | # This program is distributed in the hope that it will be useful,
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11 | # but WITHOUT ANY WARRANTY; without even the implied warranty of
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12 | # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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13 | # GNU General Public License for more details.
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14 | #
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15 | # You should have received a copy of the GNU General Public License
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16 | # along with this program. If not, see <http://www.gnu.org/licenses/>.
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17 | #
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18 | #
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19 | # MoleCuilder - creates and alters molecular systems
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20 | # Copyright (C) 2008-2012 University of Bonn
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21 | #
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22 | # This program is free software: you can redistribute it and/or modify
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23 | # it under the terms of the GNU General Public License as published by
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24 | # the Free Software Foundation, either version 3 of the License, or
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25 | # (at your option) any later version.
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26 | #
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27 | # This program is distributed in the hope that it will be useful,
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28 | # but WITHOUT ANY WARRANTY; without even the implied warranty of
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29 | # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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30 | # GNU General Public License for more details.
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31 | #
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32 | # You should have received a copy of the GNU General Public License
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33 | # along with this program. If not, see <http://www.gnu.org/licenses/>.
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34 | #
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35 | ### dipole correlation - discrete angles
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36 |
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37 | AT_SETUP([Analysis - dipole correlation - same aligned])
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38 | AT_KEYWORDS([analysis correlation dipole-correlation])
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39 |
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40 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Analysis/DipoleCorrelation-DiscreteAngles/pre/water.xyz .], 0)
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41 | AT_CHECK([../../molecuilder -i waterbox.xyz -o xyz --fill-void water.xyz --distances "3.1,3.1,3.1" --distance-to-boundary "1." --DoRotate 0], 0, [stdout], [stderr])
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42 | AT_CHECK([../../molecuilder -i waterbox.xyz -o xyz -I --select-all-molecules --dipole-correlation --bin-start -0.5 --bin-width 1. --bin-end 359.5 --output-file waterbox_values.dat --bin-output-file waterbox_histogram.dat], 0, [stdout], [stderr])
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43 | AT_CHECK([file=waterbox_histogram.dat; diff $file ${abs_top_srcdir}/tests/regression/Analysis/DipoleCorrelation-DiscreteAngles/post/waterbox_histogram.dat], 0, [ignore], [ignore])
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44 |
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45 | AT_CLEANUP
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46 |
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47 |
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48 | AT_SETUP([Analysis - dipole correlation - same aligned but one])
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49 | AT_KEYWORDS([analysis correlation dipole-correlation])
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50 |
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51 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Analysis/DipoleCorrelation-DiscreteAngles/pre/water.xyz .], 0)
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52 | AT_CHECK([../../molecuilder -i waterbox-mirrored.xyz -o xyz --fill-void water.xyz --distances "3.1,3.1,3.1" --distance-to-boundary "1." --DoRotate 0], 0, [stdout], [stderr])
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53 | AT_CHECK([../../molecuilder -i waterbox-mirrored.xyz -I -v 3 --set-shape --shape-type "sphere" --translation "5.63,5.71,5.71" --stretch "0.2,0.2,0.2" --create-shape --shape-name "sphere1" --select-shape-by-name "sphere1" --select-atoms-inside-volume --select-atoms-molecules --rotate-around-self 180 --axis "0,1,0"], 0, [stdout], [stderr])
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54 | AT_CHECK([../../molecuilder -i waterbox-mirrored.xyz -o xyz -I --select-all-molecules --dipole-correlation --bin-start -0.5 --bin-width 1. --bin-end 359.5 --output-file waterbox-mirrored_values.dat --bin-output-file waterbox-mirrored_histogram.dat], 0, [stdout], [stderr])
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55 | AT_CHECK([file=waterbox-mirrored_histogram.dat; diff $file ${abs_top_srcdir}/tests/regression/Analysis/DipoleCorrelation-DiscreteAngles/post/waterbox-mirrored_histogram.dat], 0, [ignore], [ignore])
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56 |
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57 | AT_CLEANUP
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