[6253ed] | 1 | #
|
---|
| 2 | # MoleCuilder - creates and alters molecular systems
|
---|
| 3 | # Copyright (C) 2008-2012 University of Bonn
|
---|
| 4 | #
|
---|
| 5 | # This program is free software: you can redistribute it and/or modify
|
---|
| 6 | # it under the terms of the GNU General Public License as published by
|
---|
| 7 | # the Free Software Foundation, either version 3 of the License, or
|
---|
| 8 | # (at your option) any later version.
|
---|
| 9 | #
|
---|
| 10 | # This program is distributed in the hope that it will be useful,
|
---|
| 11 | # but WITHOUT ANY WARRANTY; without even the implied warranty of
|
---|
| 12 | # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
---|
| 13 | # GNU General Public License for more details.
|
---|
| 14 | #
|
---|
| 15 | # You should have received a copy of the GNU General Public License
|
---|
| 16 | # along with this program. If not, see <http://www.gnu.org/licenses/>.
|
---|
| 17 | #
|
---|
| 18 | #
|
---|
| 19 | # MoleCuilder - creates and alters molecular systems
|
---|
| 20 | # Copyright (C) 2008-2012 University of Bonn
|
---|
| 21 | #
|
---|
| 22 | # This program is free software: you can redistribute it and/or modify
|
---|
| 23 | # it under the terms of the GNU General Public License as published by
|
---|
| 24 | # the Free Software Foundation, either version 3 of the License, or
|
---|
| 25 | # (at your option) any later version.
|
---|
| 26 | #
|
---|
| 27 | # This program is distributed in the hope that it will be useful,
|
---|
| 28 | # but WITHOUT ANY WARRANTY; without even the implied warranty of
|
---|
| 29 | # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
---|
| 30 | # GNU General Public License for more details.
|
---|
| 31 | #
|
---|
| 32 | # You should have received a copy of the GNU General Public License
|
---|
| 33 | # along with this program. If not, see <http://www.gnu.org/licenses/>.
|
---|
| 34 | #
|
---|
[4fc828] | 35 | ### dipole angular correlation analysis
|
---|
| 36 |
|
---|
[a860a1] | 37 | AT_SETUP([Analysis - dipole angular correlation on PDBs with CONECT, zero change])
|
---|
[4fc828] | 38 | AT_KEYWORDS([analysis dipole correlation pdb dipole-angular-correlation])
|
---|
| 39 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/pre/watermulti_X.pdb .], 0)
|
---|
[c3a70d] | 40 | AT_CHECK([../../molecuilder -v 4 -i watermulti_X.pdb -o pdb --dipole-angular-correlation H2O --bin-start -5 --bin-width 10. --bin-end 184.5 --time-step-zero 0 --output-file water_values --bin-output-file water_histogram], 0, [stdout], [stderr])
|
---|
[a860a1] | 41 | i=0; while test $i -ne 36; do
|
---|
| 42 | step=`printf %04d $i`
|
---|
| 43 | AT_CHECK([diff water_histogram.$step.dat ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/post/water_histogram_X.dat], 0, [ignore], [ignore])
|
---|
| 44 | AT_CHECK([diff water_values.$step.dat ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/post/water_values_X.dat], 0, [ignore], [ignore])
|
---|
| 45 | let i=$i+1
|
---|
| 46 | done
|
---|
| 47 | AT_CLEANUP
|
---|
| 48 |
|
---|
| 49 | AT_SETUP([Analysis - dipole angular correlation on PDBs with CONECT, true change])
|
---|
| 50 | AT_KEYWORDS([analysis dipole correlation pdb dipole-angular-correlation])
|
---|
[4fc828] | 51 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/pre/watermulti_Y.pdb .], 0)
|
---|
[c3a70d] | 52 | AT_CHECK([../../molecuilder -v 4 -i watermulti_Y.pdb -o pdb --dipole-angular-correlation H2O --bin-start -5 --bin-width 10. --bin-end 184.5 --time-step-zero 0 --output-file water_values --bin-output-file water_histogram], 0, [stdout], [stderr])
|
---|
[a860a1] | 53 | i=0; while test $i -ne 36; do
|
---|
| 54 | step=`printf %04d $i`
|
---|
| 55 | AT_CHECK([diff water_histogram.$step.dat ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/post/water_histogram_Y.$step.dat], 0, [ignore], [ignore])
|
---|
| 56 | AT_CHECK([diff water_values.$step.dat ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/post/water_values_Y.$step.dat], 0, [ignore], [ignore])
|
---|
| 57 | let i=$i+1
|
---|
| 58 | done
|
---|
[4b8630] | 59 | AT_CLEANUP
|
---|
| 60 |
|
---|
[a860a1] | 61 | AT_SETUP([Analysis - dipole angular correlation on XYZs, zero change])
|
---|
[4b8630] | 62 | AT_KEYWORDS([analysis dipole correlation xyz dipole-angular-correlation])
|
---|
| 63 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/pre/watermulti_X.xyz .], 0)
|
---|
[c3a70d] | 64 | AT_CHECK([../../molecuilder -v 4 -i watermulti_X.xyz -o xyz -I --dipole-angular-correlation H2O --bin-start -5 --bin-width 10. --bin-end 184.5 --time-step-zero 0 --output-file water_values --bin-output-file water_histogram], 0, [stdout], [stderr])
|
---|
[a860a1] | 65 | i=0; while test $i -ne 36; do
|
---|
| 66 | step=`printf %04d $i`
|
---|
| 67 | AT_CHECK([diff water_histogram.$step.dat ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/post/water_histogram_X.dat], 0, [ignore], [ignore])
|
---|
| 68 | AT_CHECK([diff water_values.$step.dat ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/post/water_values_X.dat], 0, [ignore], [ignore])
|
---|
| 69 | let i=$i+1
|
---|
| 70 | done
|
---|
| 71 | AT_CLEANUP
|
---|
| 72 |
|
---|
| 73 | AT_SETUP([Analysis - dipole angular correlation on XYZs, true change])
|
---|
| 74 | AT_KEYWORDS([analysis dipole correlation xyz dipole-angular-correlation])
|
---|
[4b8630] | 75 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/pre/watermulti_Y.xyz .], 0)
|
---|
[c3a70d] | 76 | AT_CHECK([../../molecuilder -v 4 -i watermulti_Y.xyz -o xyz -I --dipole-angular-correlation H2O --bin-start -5 --bin-width 10. --bin-end 184.5 --time-step-zero 0 --output-file water_values --bin-output-file water_histogram], 0, [stdout], [stderr])
|
---|
[a860a1] | 77 | i=0; while test $i -ne 36; do
|
---|
| 78 | step=`printf %04d $i`
|
---|
| 79 | AT_CHECK([diff water_histogram.$step.dat ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/post/water_histogram_Y.$step.dat], 0, [ignore], [ignore])
|
---|
| 80 | AT_CHECK([diff water_values.$step.dat ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/post/water_values_Y.$step.dat], 0, [ignore], [ignore])
|
---|
| 81 | let i=$i+1
|
---|
| 82 | done
|
---|
[4fc828] | 83 | AT_CLEANUP
|
---|
| 84 |
|
---|