| 1 | #
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| 2 | # MoleCuilder - creates and alters molecular systems
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| 3 | # Copyright (C) 2008-2012 University of Bonn
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| 4 | #
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| 5 | # This program is free software: you can redistribute it and/or modify
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| 6 | # it under the terms of the GNU General Public License as published by
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| 7 | # the Free Software Foundation, either version 3 of the License, or
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| 8 | # (at your option) any later version.
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| 9 | #
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| 10 | # This program is distributed in the hope that it will be useful,
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| 11 | # but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 12 | # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 13 | # GNU General Public License for more details.
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| 14 | #
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| 15 | # You should have received a copy of the GNU General Public License
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| 16 | # along with this program. If not, see <http://www.gnu.org/licenses/>.
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| 17 | #
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| 18 | ### Bonds from file
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| 19 |
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| 20 | AT_SETUP([Molecules - TREMOLO dbond file])
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| 21 | AT_KEYWORDS([molecules bond-file])
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| 22 |
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| 23 | file=silica.pov1.0000.pdb
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| 24 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Molecules/BondFile/pre/silica.pov1.0000.pdb $file], 0)
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| 25 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Molecules/BondFile/pre/silica.dbond.0000 .], 0)
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| 26 | AT_CHECK([chmod u+w $file], 0)
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| 27 | AT_CHECK([../../molecuilder --dry-run -i $file -v 4 --select-molecule-by-id 0 -A silica.dbond.0000 --skiplines 2 --offset 1 --no-dry-run --store-session session-molecules-tremolo-dbond-file.py --session-type python], 0, [stdout], [stderr])
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| 28 | AT_CHECK([grep -v "Command.*DryRun" session-molecules-tremolo-dbond-file.py >session-molecules-tremolo-dbond-file_new.py], 0, [ignore], [ignore])
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| 29 | AT_CHECK([../../molecuilderguitest session-molecules-tremolo-dbond-file_new.py], 0, [stdout], [stderr])
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| 30 | AT_CHECK([fgrep -c "CONECT 10 3 2 1" $file], 0, [1
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| 31 | ], [ignore])
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| 32 |
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| 33 | AT_CLEANUP
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| 34 |
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| 35 |
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| 36 | AT_SETUP([Molecules - TREMOLO dbond file with Undo])
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| 37 | AT_XFAIL_IF([/bin/true])
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| 38 | AT_KEYWORDS([molecules bond-file undo])
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| 39 |
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| 40 | file=silica.pov1.0000.pdb
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| 41 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Molecules/BondFile/pre/silica.pov1.0000.pdb $file], 0)
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| 42 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Molecules/BondFile/pre/silica.dbond.0000 .], 0)
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| 43 | AT_CHECK([chmod u+w $file], 0)
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| 44 | AT_CHECK([../../molecuilder --dry-run -i $file -v 4 --select-molecule-by-id 0 -A silica.dbond.0000 --skiplines 2 --offset 1 --undo --no-dry-run --store-session session-molecules-tremolo-dbond-file.py --session-type python], 0, [stdout], [stderr])
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| 45 | AT_CHECK([grep -v "Command.*DryRun" session-molecules-tremolo-dbond-file.py >session-molecules-tremolo-dbond-file_new.py], 0, [ignore], [ignore])
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| 46 | AT_CHECK([../../molecuilderguitest session-molecules-tremolo-dbond-file_new.py], 0, [stdout], [stderr])
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| 47 | AT_CHECK([fgrep -c "CONECT 10 3 2 1" $file], 0, [1
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| 48 | ], [ignore])
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| 49 |
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| 50 | AT_CLEANUP
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| 51 |
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| 52 |
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| 53 | AT_SETUP([Molecules - TREMOLO dbond file with Redo])
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| 54 | AT_XFAIL_IF([/bin/true])
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| 55 | AT_KEYWORDS([molecules bond-file redo])
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| 56 |
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| 57 | file=silica.pov1.0000.pdb
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| 58 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Molecules/BondFile/pre/silica.pov1.0000.pdb $file], 0)
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| 59 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Molecules/BondFile/pre/silica.dbond.0000 .], 0)
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| 60 | AT_CHECK([chmod u+w $file], 0)
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| 61 | AT_CHECK([../../molecuilder --dry-run -i $file -v 4 --select-molecule-by-id 0 -A silica.dbond.0000 --skiplines 2 --offset 1 --undo --redo --no-dry-run --store-session session-molecules-tremolo-dbond-file.py --session-type python], 0, [stdout], [stderr])
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| 62 | AT_CHECK([grep -v "Command.*DryRun" session-molecules-tremolo-dbond-file.py >session-molecules-tremolo-dbond-file_new.py], 0, [ignore], [ignore])
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| 63 | AT_CHECK([../../molecuilderguitest session-molecules-tremolo-dbond-file_new.py], 0, [stdout], [stderr])
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| 64 | AT_CHECK([fgrep -c "CONECT 10 3 2 1" $file], 0, [1
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| 65 | ], [ignore])
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| 66 |
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| 67 | AT_CLEANUP
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