source: tests/GuiChecks/Filling/FillSurface/testsuite-fill-surface-micelle.at@ dd6c07

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Last change on this file since dd6c07 was dd6c07, checked in by Frederik Heber <heber@…>, 10 years ago

Added all new guichecks regression tests generated from createGuiChecks.sh script.

  • Property mode set to 100644
File size: 3.8 KB
Line 
1#
2# MoleCuilder - creates and alters molecular systems
3# Copyright (C) 2014 Frederik Heber
4#
5# This program is free software: you can redistribute it and/or modify
6# it under the terms of the GNU General Public License as published by
7# the Free Software Foundation, either version 3 of the License, or
8# (at your option) any later version.
9#
10# This program is distributed in the hope that it will be useful,
11# but WITHOUT ANY WARRANTY; without even the implied warranty of
12# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
13# GNU General Public License for more details.
14#
15# You should have received a copy of the GNU General Public License
16# along with this program. If not, see <http://www.gnu.org/licenses/>.
17#
18### create Micelle by filling sphere's surface
19
20AT_SETUP([Filling - Creating micelle by surface filling])
21AT_KEYWORDS([filling fill-surface sphere micelle rotate-to-principal-axis-system])
22
23file=tensid.data
24AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Filling/FillSurface/pre/tensid.data $file], 0)
25AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Filling/FillSurface/pre/tensid.potentials .], 0)
26AT_CHECK([chmod u+w $file], 0)
27AT_CHECK([../../molecuilder \
28 --parse-tremolo-potentials tensid.potentials \
29 -i $file \
30 --select-all-molecules \
31 --rotate-to-principal-axis-system "0,0,-1" \
32 --create-shape \
33 --shape-name "sphere1" \
34 --shape-type "sphere" \
35 --translation "0,0,0" \
36 --stretch "20.,20.,20." \
37 --select-shape-by-name "sphere1" \
38 --fill-surface \
39 --count 20 \
40 --min-distance 3.1 \
41 --Alignment-Axis "0,0,1"
42], 0, [stdout], [stderr])
43AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Filling/FillSurface/post/tensid.data], 0, [ignore], [ignore])
44
45AT_CLEANUP
46
47
48AT_SETUP([Filling - Creating micelle by surface filling with Undo])
49AT_KEYWORDS([filling fill-surface sphere micelle rotate-to-principal-axis-system undo])
50
51file=tensid-undo.data
52AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Filling/FillSurface/pre/tensid.data $file], 0)
53AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Filling/FillSurface/pre/tensid.potentials .], 0)
54AT_CHECK([chmod u+w $file], 0)
55AT_CHECK([../../molecuilder \
56 --parse-tremolo-potentials tensid.potentials \
57 -i $file \
58 --select-all-molecules \
59 --rotate-to-principal-axis-system "0,0,-1" \
60 --create-shape \
61 --shape-name "sphere1" \
62 --shape-type "sphere" \
63 --translation "0,0,0" \
64 --stretch "20.,20.,20." \
65 --select-shape-by-name "sphere1" \
66 --fill-surface \
67 --count 20 \
68 --min-distance 3.1 \
69 --Alignment-Axis "0,0,1" \
70 --undo
71], 0, [stdout], [stderr])
72AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Filling/FillSurface/post/$file], 0, [ignore], [ignore])
73
74AT_CLEANUP
75
76
77AT_SETUP([Filling - Creating micelle by surface filling with Redo])
78AT_KEYWORDS([filling fill-surface sphere micelle rotate-to-principal-axis-system redo])
79
80file=tensid.data
81AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Filling/FillSurface/pre/tensid.data $file], 0)
82AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Filling/FillSurface/pre/tensid.potentials .], 0)
83AT_CHECK([chmod u+w $file], 0)
84AT_CHECK([../../molecuilder \
85 --parse-tremolo-potentials tensid.potentials \
86 -i $file \
87 --select-all-molecules \
88 --rotate-to-principal-axis-system "0,0,-1" \
89 --create-shape \
90 --shape-name "sphere1" \
91 --shape-type "sphere" \
92 --translation "0,0,0" \
93 --stretch "20.,20.,20." \
94 --select-shape-by-name "sphere1" \
95 --fill-surface \
96 --count 20 \
97 --min-distance 3.1 \
98 --Alignment-Axis "0,0,1" \
99 --undo \
100 --redo
101], 0, [stdout], [stderr])
102AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Filling/FillSurface/post/tensid.data], 0, [ignore], [ignore])
103
104AT_CLEANUP
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