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              ../
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    unittests
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    748fc7
     
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    11 years
   | 
  FrederikHeber | 
  
    libMolecuilder is now a shared library.
- linking error …
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    UIElements
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    2050b2
     
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    11 years
   | 
  FrederikHeber | 
  
    Commented-out all debugging messages in QtMoleculeList rewrite.
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    Thermostats
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    f73351
     
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    12 years
   | 
  FrederikHeber | 
  
    FIX: Some Thermostats would cause NaN on zero temperature.
- …
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    Tesselation
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    5f7b95
     
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    11 years
   | 
  FrederikHeber | 
  
    Convex-envelope has debug parameter DoOutputEveryStep.
- this writes …
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    Shapes
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    748fc7
     
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    11 years
   | 
  FrederikHeber | 
  
    libMolecuilder is now a shared library.
- linking error …
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    RandomNumbers
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    748fc7
     
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    11 years
   | 
  FrederikHeber | 
  
    libMolecuilder is now a shared library.
- linking error …
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    Python
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    74459a
     
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    11 years
   | 
  FrederikHeber | 
  
    Added --disable-action-thread to allow disabling of extra run thread.
 …
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    Potentials
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    423449
     
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    11 years
   | 
  FrederikHeber | 
  
    DISTFIX: POTENTIALSOURCES was overwritten, not added to.
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    Parser
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    910a5d
     
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    11 years
   | 
  FrederikHeber | 
  
    atom::father is now accessible through getter and setter only.
- this …
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    Parameters
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    f8bccc
     
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    11 years
   | 
  FrederikHeber | 
  
    FIX: QtQueryList now works with pointers, FileQtQuery gives name of …
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    LinkedCell
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    8cc22f
     
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    11 years
   | 
  FrederikHeber | 
  
    Changed how trajectories are stored, not as vecor but as map.
- …
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    Jobs
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    748fc7
     
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    11 years
   | 
  FrederikHeber | 
  
    libMolecuilder is now a shared library.
- linking error …
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    Helpers
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    adb51ab
     
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    12 years
   | 
  FrederikHeber | 
  
    FragmentationAction stores cycles to file and in …
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    Graph
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    910a5d
     
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    11 years
   | 
  FrederikHeber | 
  
    atom::father is now accessible through getter and setter only.
- this …
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    FunctionApproximation
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    748fc7
     
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    11 years
   | 
  FrederikHeber | 
  
    libMolecuilder is now a shared library.
- linking error …
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    Fragmentation
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    910a5d
     
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    11 years
   | 
  FrederikHeber | 
  
    atom::father is now accessible through getter and setter only.
- this …
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    Filling
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    df9f20
     
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    11 years
   | 
  FrederikHeber | 
  
    Refactored FillSurfaceAction to also use FillerPreparators.
- added …
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    Element
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    748fc7
     
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    11 years
   | 
  FrederikHeber | 
  
    libMolecuilder is now a shared library.
- linking error …
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    Dynamics
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    7f833c
     
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    11 years
   | 
  FrederikHeber | 
  
    Giving the maximum components over all force vectors in ForceAnnealing.
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    documentation
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    8544b32
     
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    11 years
   | 
  FrederikHeber | 
  
    DOCU: Added extensive explanation how convexization works.
- updated …
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    Descriptors
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    748fc7
     
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    11 years
   | 
  FrederikHeber | 
  
    libMolecuilder is now a shared library.
- linking error …
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    Bond
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    5aaa43
     
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    12 years
   | 
  FrederikHeber | 
  
    FIX: Fixed new copyright line since start of 2013 in CodeChecks test.
 …
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    Atom
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    d05088
     
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    11 years
   | 
  FrederikHeber | 
  
    FIX: Atom is notified when its father dies and resets father to itself …
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    Analysis
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    833b15
     
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    11 years
   | 
  FrederikHeber | 
  
    FIX: Changes to function signatures in molecule_geometry.
- no more …
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    Actions
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    6bbdfb
     
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    11 years
   | 
  FrederikHeber | 
  
    tempcommit: Trying to make run_thread relaunchable whenever new Action …
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    WorldTime.hpp
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    2.0 KB
    
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    e3f9b8
     
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    12 years
   | 
  FrederikHeber | 
  
    FIX: WorldTime's dstor is now virtual.
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    WorldTime.cpp
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    2.1 KB
    
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    5aaa43
     
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    12 years
   | 
  FrederikHeber | 
  
    FIX: Fixed new copyright line since start of 2013 in CodeChecks test.
 …
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    World_calculations.hpp
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    743 bytes
    
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    3139b2
     
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    14 years
   | 
  FrederikHeber | 
  
    Renamed ActionTrait and ActionTraits.
- the specialized Trait …
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    World.hpp
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    16.8 KB
    
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    cad383
     
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    11 years
   | 
  FrederikHeber | 
  
    Added push/pop[Atoms|Molecules]Selection to World.
- this is mostly …
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    World.cpp
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    26.5 KB
    
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    4f2895
     
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    11 years
   | 
  FrederikHeber | 
  
    FIX: World::SetTime() erased molecules twice.
- once in SetTime() and …
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    version.h
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    103 bytes
    
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    5f8660a
     
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    15 years
   | 
  FrederikHeber | 
  
    Changed PACKAGENAME and version.
- rename ESPACKVersion in …
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    types.hpp
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    482 bytes
    
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    56f73b
     
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    15 years
   | 
  FrederikHeber | 
  
    Added config.h also to all header files, code check test ascertain …
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    Server.cpp
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    1.4 KB
    
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    1b01e9
     
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    13 years
   | 
  FrederikHeber | 
  
    FIX: Server missed forced binding to MPQCJob.
- present was only to …
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    poolworker.cpp
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    1.4 KB
    
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    1b01e9
     
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    13 years
   | 
  FrederikHeber | 
  
    FIX: Server missed forced binding to MPQCJob.
- present was only to …
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    MoleculeListClass.hpp
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    1.4 KB
    
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    dcbb5d
     
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    13 years
   | 
  FrederikHeber | 
  
    REFACTOR: Replaced SortIndex by a distinct class to allow replacement.
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    moleculelist.cpp
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    21.9 KB
    
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    910a5d
     
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    11 years
   | 
  FrederikHeber | 
  
    atom::father is now accessible through getter and setter only.
- this …
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    MoleculeLeafClass.hpp
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    1.1 KB
    
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    339910
     
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    13 years
   | 
  FrederikHeber | 
  
    Fragmentation now operates on a single molecule.
- FragmentMolecule() …
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    MoleculeLeafClass.cpp
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    3.7 KB
    
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    a7aebd
     
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    11 years
   | 
  FrederikHeber | 
  
    World removes empty molecules.
- on destroyAtom() of molecule's last …
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    molecule_graph.cpp
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    13.3 KB
    
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    5aaa43
     
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    12 years
   | 
  FrederikHeber | 
  
    FIX: Fixed new copyright line since start of 2013 in CodeChecks test.
 …
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    molecule_geometry.cpp
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    17.3 KB
    
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    8cc22f
     
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    11 years
   | 
  FrederikHeber | 
  
    Changed how trajectories are stored, not as vecor but as map.
- …
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    molecule.hpp
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    10.0 KB
    
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    24edfe
     
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    11 years
   | 
  FrederikHeber | 
  
    Added AboutToBeRemoved channel to molecule.
- this allows UI elements …
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    molecule.cpp
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    40.0 KB
    
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    0a5beb
     
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    11 years
   | 
  FrederikHeber | 
  
    MEMFIX: removeAtomsinMolecule() worked directly with …
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    Makefile.am
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    15.6 KB
    
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    748fc7
     
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    11 years
   | 
  FrederikHeber | 
  
    libMolecuilder is now a shared library.
- linking error …
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    IdPool_policy.hpp
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    1.0 KB
    
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    b97a60
     
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    14 years
   | 
  FrederikHeber | 
  
    Modified IdPool implementation to give either unique or continuous …
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    IdPool_impl.hpp
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    3.7 KB
    
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    5a4cbc
     
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    14 years
   | 
  FrederikHeber | 
  
    VERBOSITY: Increased verbosity threshold of some outputs connected to …
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    IdPool.hpp
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    2.8 KB
    
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    b97a60
     
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    14 years
   | 
  FrederikHeber | 
  
    Modified IdPool implementation to give either unique or continuous …
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    Formula.hpp
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    4.0 KB
    
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    47ed3d
     
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    14 years
   | 
  FrederikHeber | 
  
    Removed some old output functions in element, Formula, and molecule.
 …
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    Formula.cpp
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    15.1 KB
    
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    94d5ac6
     
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    13 years
   | 
  FrederikHeber | 
  
    FIX: As we use GSL internally, we are as of now required to use GPL v2 …
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    ControllerOptions_MPQCCommandJob.hpp
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    910 bytes
    
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    856d05
     
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    13 years
   | 
  FrederikHeber | 
  
    MEMFIX: Added WorldTime and ObserverLog ::purgeInstance() calls.
- …
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    ControllerOptions_MPQCCommandJob.cpp
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    2.4 KB
    
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    94d5ac6
     
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    13 years
   | 
  FrederikHeber | 
  
    FIX: As we use GSL internally, we are as of now required to use GPL v2 …
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    controller_MPQCCommandJob.hpp
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    1.1 KB
    
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    856d05
     
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    13 years
   | 
  FrederikHeber | 
  
    MEMFIX: Added WorldTime and ObserverLog ::purgeInstance() calls.
- …
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    controller_MPQCCommandJob.cpp
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    13.9 KB
    
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    5aaa43
     
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    12 years
   | 
  FrederikHeber | 
  
    FIX: Fixed new copyright line since start of 2013 in CodeChecks test.
 …
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    controller_AddOn_MPQCCommandJob.cpp
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    1.2 KB
    
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    94d5ac6
     
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    13 years
   | 
  FrederikHeber | 
  
    FIX: As we use GSL internally, we are as of now required to use GPL v2 …
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    controller.cpp
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    1.2 KB
    
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    94d5ac6
     
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    13 years
   | 
  FrederikHeber | 
  
    FIX: As we use GSL internally, we are as of now required to use GPL v2 …
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    config.hpp
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    483 bytes
    
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    41a467
     
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    14 years
   | 
  FrederikHeber | 
  
    LARGE: config class is now just a tiny container.
- this was …
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    config.cpp
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    1.8 KB
    
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    94d5ac6
     
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    13 years
   | 
  FrederikHeber | 
  
    FIX: As we use GSL internally, we are as of now required to use GPL v2 …
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    cleanUp.hpp
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    402 bytes
    
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    74459a
     
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    11 years
   | 
  FrederikHeber | 
  
    Added --disable-action-thread to allow disabling of extra run thread.
 …
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    cleanUp.cpp
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    7.5 KB
    
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    96c7d2
     
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    11 years
   | 
  FrederikHeber | 
  
    MEMFIX: PotentialRegistry's dstor forgot cleanup().
- also we purge …
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    builder_init.hpp
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    328 bytes
    
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    415ddd
     
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    11 years
   | 
  FrederikHeber | 
  
    ActionQueue now contains a run thread.
- otherwise the progress bar …
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    builder_init.cpp
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    4.8 KB
    
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    748fc7
     
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    11 years
   | 
  FrederikHeber | 
  
    libMolecuilder is now a shared library.
- linking error …
   | 
  | 
    builder.cpp
   | 
  
    1.7 KB
    
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    cf5b40
     
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    11 years
   | 
  FrederikHeber | 
  
    FIX: On defined LOG_OBSERVER we also enableLogging() in main().
- I …
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    Box_BoundaryConditions.hpp
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    2.4 KB
    
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    de2031
     
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    13 years
   | 
  FrederikHeber | 
  
    BoundaryConditionValidator implemented
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    Box_BoundaryConditions.cpp
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    7.3 KB
    
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    94d5ac6
     
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    13 years
   | 
  FrederikHeber | 
  
    FIX: As we use GSL internally, we are as of now required to use GPL v2 …
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    Box.hpp
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    4.6 KB
    
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    25aa5a
     
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    11 years
   | 
  FrederikHeber | 
  
    FIX: Box::setM() did not use const ref as argument.
   | 
  | 
    Box.cpp
   | 
  
    12.1 KB
    
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    25aa5a
     
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    11 years
   | 
  FrederikHeber | 
  
    FIX: Box::setM() did not use const ref as argument.
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  | 
    AtomIdSet.hpp
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    1.9 KB
    
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    c1353f5
     
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    12 years
   | 
  FrederikHeber | 
  
    Added AtomIdSet cstor that converts from a KeySet.
- as this requires …
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    AtomIdSet.cpp
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    6.0 KB
    
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    c1353f5
     
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    12 years
   | 
  FrederikHeber | 
  
    Added AtomIdSet cstor that converts from a KeySet.
- as this requires …
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