source: src/unittests/bondgraphunittest.cpp@ e138de

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Last change on this file since e138de was e138de, checked in by Frederik Heber <heber@…>, 15 years ago

Huge change from ofstream * (const) out --> Log().

  • first shift was done via regular expressions
  • then via error messages from the code
  • note that class atom, class element and class molecule kept in parts their output stream, was they print to file.
  • make check runs fine
  • MISSING: Verbosity is not fixed for everything (i.e. if no endl; is present and next has Verbose(0) ...)

Signed-off-by: Frederik Heber <heber@…>

  • Property mode set to 100644
File size: 3.8 KB
Line 
1/*
2 * bondgraphunittest.cpp
3 *
4 * Created on: Oct 29, 2009
5 * Author: heber
6 */
7
8using namespace std;
9
10#include <cppunit/CompilerOutputter.h>
11#include <cppunit/extensions/TestFactoryRegistry.h>
12#include <cppunit/ui/text/TestRunner.h>
13
14#include <iostream>
15#include <stdio.h>
16
17#include "atom.hpp"
18#include "bond.hpp"
19#include "bondgraph.hpp"
20#include "element.hpp"
21#include "molecule.hpp"
22#include "periodentafel.hpp"
23#include "bondgraphunittest.hpp"
24
25/********************************************** Test classes **************************************/
26
27// Registers the fixture into the 'registry'
28CPPUNIT_TEST_SUITE_REGISTRATION( BondGraphTest );
29
30
31void BondGraphTest::setUp()
32{
33 atom *Walker = NULL;
34
35 // init private all pointers to zero
36 TestMolecule = NULL;
37 hydrogen = NULL;
38 tafel = NULL;
39
40 // construct element
41 hydrogen = new element;
42 hydrogen->Z = 1;
43 strcpy(hydrogen->name, "hydrogen");
44 strcpy(hydrogen->symbol, "H");
45 carbon = new element;
46 carbon->Z = 1;
47 strcpy(carbon->name, "carbon");
48 strcpy(carbon->symbol, "C");
49
50
51 // construct periodentafel
52 tafel = new periodentafel;
53 tafel->AddElement(hydrogen);
54 tafel->AddElement(carbon);
55
56 // construct molecule (tetraeder of hydrogens)
57 TestMolecule = new molecule(tafel);
58 Walker = new atom();
59 Walker->type = hydrogen;
60 Walker->node->Init(1., 0., 1. );
61 TestMolecule->AddAtom(Walker);
62 Walker = new atom();
63 Walker->type = hydrogen;
64 Walker->node->Init(0., 1., 1. );
65 TestMolecule->AddAtom(Walker);
66 Walker = new atom();
67 Walker->type = hydrogen;
68 Walker->node->Init(1., 1., 0. );
69 TestMolecule->AddAtom(Walker);
70 Walker = new atom();
71 Walker->type = hydrogen;
72 Walker->node->Init(0., 0., 0. );
73 TestMolecule->AddAtom(Walker);
74
75 // check that TestMolecule was correctly constructed
76 CPPUNIT_ASSERT_EQUAL( TestMolecule->AtomCount, 4 );
77
78 // create a small file with table
79 filename = new string("test.dat");
80 ofstream test(filename->c_str());
81 test << ".\tH\tC\n";
82 test << "H\t1.\t1.2\n";
83 test << "C\t1.2\t1.5\n";
84 BG = new BondGraph(true);
85};
86
87
88void BondGraphTest::tearDown()
89{
90 // remove the file
91 remove(filename->c_str());
92 delete(filename);
93 delete(BG);
94
95 // remove molecule
96 delete(TestMolecule);
97 // note that all the atoms are cleaned by TestMolecule
98 delete(tafel);
99 // note that element is cleaned by periodentafel
100};
101
102/** UnitTest for BondGraphTest::LoadBondLengthTable().
103 */
104void BondGraphTest::LoadTableTest()
105{
106 CPPUNIT_ASSERT_EQUAL( true , BG->LoadBondLengthTable(*filename) );
107 CPPUNIT_ASSERT_EQUAL( 1., BG->GetBondLength(0,0) );
108 CPPUNIT_ASSERT_EQUAL( 1.2, BG->GetBondLength(0,1) );
109 CPPUNIT_ASSERT_EQUAL( 1.5, BG->GetBondLength(1,1) );
110};
111
112/** UnitTest for BondGraphTest::ConstructBondGraph().
113 */
114void BondGraphTest::ConstructGraphTest()
115{
116 atom *Walker = TestMolecule->start->next;
117 atom *Runner = TestMolecule->end->previous;
118 CPPUNIT_ASSERT( TestMolecule->end != Walker );
119 CPPUNIT_ASSERT_EQUAL( true , BG->LoadBondLengthTable(*filename) );
120 CPPUNIT_ASSERT_EQUAL( true , BG->ConstructBondGraph(TestMolecule) );
121 CPPUNIT_ASSERT_EQUAL( true , Walker->IsBondedTo(Runner) );
122};
123
124
125/********************************************** Main routine **************************************/
126
127int main(int argc, char **argv)
128{
129 // Get the top level suite from the registry
130 CppUnit::Test *suite = CppUnit::TestFactoryRegistry::getRegistry().makeTest();
131
132 // Adds the test to the list of test to run
133 CppUnit::TextUi::TestRunner runner;
134 runner.addTest( suite );
135
136 // Change the default outputter to a compiler error format outputter
137 runner.setOutputter( new CppUnit::CompilerOutputter( &runner.result(),
138 std::cerr ) );
139 // Run the tests.
140 bool wasSucessful = runner.run();
141
142 // Return error code 1 if the one of test failed.
143 return wasSucessful ? 0 : 1;
144};
Note: See TracBrowser for help on using the repository browser.