| [c4d4df] | 1 | /*
 | 
|---|
 | 2 |  * AnalysisPairCorrelationUnitTest.cpp
 | 
|---|
 | 3 |  *
 | 
|---|
 | 4 |  *  Created on: Oct 13, 2009
 | 
|---|
 | 5 |  *      Author: heber
 | 
|---|
 | 6 |  */
 | 
|---|
 | 7 | 
 | 
|---|
 | 8 | using namespace std;
 | 
|---|
 | 9 | 
 | 
|---|
 | 10 | #include <cppunit/CompilerOutputter.h>
 | 
|---|
 | 11 | #include <cppunit/extensions/TestFactoryRegistry.h>
 | 
|---|
 | 12 | #include <cppunit/ui/text/TestRunner.h>
 | 
|---|
 | 13 | 
 | 
|---|
| [49e1ae] | 14 | #include <cstring>
 | 
|---|
 | 15 | 
 | 
|---|
| [c4d4df] | 16 | #include "analysis_correlation.hpp"
 | 
|---|
 | 17 | #include "AnalysisPairCorrelationUnitTest.hpp"
 | 
|---|
 | 18 | 
 | 
|---|
 | 19 | #include "atom.hpp"
 | 
|---|
 | 20 | #include "boundary.hpp"
 | 
|---|
 | 21 | #include "element.hpp"
 | 
|---|
 | 22 | #include "molecule.hpp"
 | 
|---|
 | 23 | #include "linkedcell.hpp"
 | 
|---|
 | 24 | #include "periodentafel.hpp"
 | 
|---|
 | 25 | #include "tesselation.hpp"
 | 
|---|
 | 26 | 
 | 
|---|
 | 27 | /********************************************** Test classes **************************************/
 | 
|---|
 | 28 | 
 | 
|---|
 | 29 | // Registers the fixture into the 'registry'
 | 
|---|
 | 30 | CPPUNIT_TEST_SUITE_REGISTRATION( AnalysisPairCorrelationUnitTest );
 | 
|---|
 | 31 | 
 | 
|---|
 | 32 | 
 | 
|---|
 | 33 | void AnalysisPairCorrelationUnitTest::setUp()
 | 
|---|
 | 34 | {
 | 
|---|
 | 35 |   atom *Walker = NULL;
 | 
|---|
 | 36 | 
 | 
|---|
 | 37 |   // init private all pointers to zero
 | 
|---|
| [a5551b] | 38 |   TestList = NULL;
 | 
|---|
| [c4d4df] | 39 |   TestMolecule = NULL;
 | 
|---|
 | 40 |   hydrogen = NULL;
 | 
|---|
 | 41 |   tafel = NULL;
 | 
|---|
 | 42 |   correlationmap = NULL;
 | 
|---|
 | 43 |   binmap = NULL;
 | 
|---|
 | 44 | 
 | 
|---|
 | 45 |   // construct element
 | 
|---|
 | 46 |   hydrogen = new element;
 | 
|---|
 | 47 |   hydrogen->Z = 1;
 | 
|---|
 | 48 |   strcpy(hydrogen->name, "hydrogen");
 | 
|---|
| [bbc338] | 49 |   strcpy(hydrogen->symbol, "H");
 | 
|---|
| [c4d4df] | 50 | 
 | 
|---|
 | 51 |   // construct periodentafel
 | 
|---|
 | 52 |   tafel = new periodentafel;
 | 
|---|
 | 53 |   tafel->AddElement(hydrogen);
 | 
|---|
 | 54 | 
 | 
|---|
 | 55 |   // construct molecule (tetraeder of hydrogens)
 | 
|---|
 | 56 |   TestMolecule = new molecule(tafel);
 | 
|---|
 | 57 |   Walker = new atom();
 | 
|---|
 | 58 |   Walker->type = hydrogen;
 | 
|---|
 | 59 |   Walker->node->Init(1., 0., 1. );
 | 
|---|
 | 60 |   TestMolecule->AddAtom(Walker);
 | 
|---|
 | 61 |   Walker = new atom();
 | 
|---|
 | 62 |   Walker->type = hydrogen;
 | 
|---|
 | 63 |   Walker->node->Init(0., 1., 1. );
 | 
|---|
 | 64 |   TestMolecule->AddAtom(Walker);
 | 
|---|
 | 65 |   Walker = new atom();
 | 
|---|
 | 66 |   Walker->type = hydrogen;
 | 
|---|
 | 67 |   Walker->node->Init(1., 1., 0. );
 | 
|---|
 | 68 |   TestMolecule->AddAtom(Walker);
 | 
|---|
 | 69 |   Walker = new atom();
 | 
|---|
 | 70 |   Walker->type = hydrogen;
 | 
|---|
 | 71 |   Walker->node->Init(0., 0., 0. );
 | 
|---|
 | 72 |   TestMolecule->AddAtom(Walker);
 | 
|---|
 | 73 | 
 | 
|---|
 | 74 |   // check that TestMolecule was correctly constructed
 | 
|---|
 | 75 |   CPPUNIT_ASSERT_EQUAL( TestMolecule->AtomCount, 4 );
 | 
|---|
 | 76 | 
 | 
|---|
| [a5551b] | 77 |   TestList = new MoleculeListClass;
 | 
|---|
 | 78 |   TestMolecule->ActiveFlag = true;
 | 
|---|
 | 79 |   TestList->insert(TestMolecule);
 | 
|---|
 | 80 | 
 | 
|---|
| [c4d4df] | 81 |   // init maps
 | 
|---|
| [e138de] | 82 |   correlationmap = PairCorrelation( TestList, hydrogen, hydrogen );
 | 
|---|
| [c4d4df] | 83 |   binmap = NULL;
 | 
|---|
 | 84 | 
 | 
|---|
 | 85 | };
 | 
|---|
 | 86 | 
 | 
|---|
 | 87 | 
 | 
|---|
 | 88 | void AnalysisPairCorrelationUnitTest::tearDown()
 | 
|---|
 | 89 | {
 | 
|---|
 | 90 |   if (correlationmap != NULL)
 | 
|---|
 | 91 |     delete(correlationmap);
 | 
|---|
 | 92 |   if (binmap != NULL)
 | 
|---|
 | 93 |     delete(binmap);
 | 
|---|
 | 94 | 
 | 
|---|
 | 95 |   // remove
 | 
|---|
| [a5551b] | 96 |   delete(TestList);
 | 
|---|
| [c4d4df] | 97 |   // note that all the atoms are cleaned by TestMolecule
 | 
|---|
 | 98 |   delete(tafel);
 | 
|---|
 | 99 |   // note that element is cleaned by periodentafel
 | 
|---|
 | 100 | };
 | 
|---|
 | 101 | 
 | 
|---|
 | 102 | void AnalysisPairCorrelationUnitTest::PairCorrelationTest()
 | 
|---|
 | 103 | {
 | 
|---|
 | 104 |   // do the pair correlation
 | 
|---|
 | 105 |   CPPUNIT_ASSERT( correlationmap != NULL );
 | 
|---|
 | 106 |   CPPUNIT_ASSERT_EQUAL( (size_t)6, correlationmap->size() );
 | 
|---|
 | 107 | };
 | 
|---|
 | 108 | 
 | 
|---|
 | 109 | void AnalysisPairCorrelationUnitTest::PairCorrelationBinNoRangeTest()
 | 
|---|
 | 110 | {
 | 
|---|
 | 111 |   BinPairMap::iterator tester;
 | 
|---|
 | 112 |   // put pair correlation into bins and check with no range
 | 
|---|
| [e138de] | 113 |   binmap = BinData( correlationmap, 0.5, 0., 0. );
 | 
|---|
| [c4d4df] | 114 |   CPPUNIT_ASSERT_EQUAL( (size_t)1, binmap->size() );
 | 
|---|
| [e138de] | 115 |   //OutputCorrelation ( binmap );
 | 
|---|
| [c4d4df] | 116 |   tester = binmap->begin();
 | 
|---|
 | 117 |   CPPUNIT_ASSERT_EQUAL( sqrt(2.), tester->first );
 | 
|---|
 | 118 |   CPPUNIT_ASSERT_EQUAL( 6, tester->second );
 | 
|---|
 | 119 | };
 | 
|---|
 | 120 | 
 | 
|---|
 | 121 | void AnalysisPairCorrelationUnitTest::PairCorrelationBinRangeTest()
 | 
|---|
 | 122 | {
 | 
|---|
 | 123 |   BinPairMap::iterator tester;
 | 
|---|
 | 124 |   // ... and check with [0., 2.] range
 | 
|---|
| [e138de] | 125 |   binmap = BinData( correlationmap, 0.5, 0., 2. );
 | 
|---|
| [c4d4df] | 126 |   CPPUNIT_ASSERT_EQUAL( (size_t)5, binmap->size() );
 | 
|---|
| [e138de] | 127 |   //OutputCorrelation ( binmap );
 | 
|---|
| [c4d4df] | 128 |   tester = binmap->begin();
 | 
|---|
 | 129 |   CPPUNIT_ASSERT_EQUAL( 0., tester->first );
 | 
|---|
 | 130 |   tester = binmap->find(1.);
 | 
|---|
 | 131 |   CPPUNIT_ASSERT_EQUAL( 1., tester->first );
 | 
|---|
 | 132 |   CPPUNIT_ASSERT_EQUAL( 6, tester->second );
 | 
|---|
 | 133 | };
 | 
|---|
 | 134 | 
 | 
|---|
 | 135 | /********************************************** Main routine **************************************/
 | 
|---|
 | 136 | 
 | 
|---|
 | 137 | int main(int argc, char **argv)
 | 
|---|
 | 138 | {
 | 
|---|
 | 139 |   // Get the top level suite from the registry
 | 
|---|
 | 140 |   CppUnit::Test *suite = CppUnit::TestFactoryRegistry::getRegistry().makeTest();
 | 
|---|
 | 141 | 
 | 
|---|
 | 142 |   // Adds the test to the list of test to run
 | 
|---|
 | 143 |   CppUnit::TextUi::TestRunner runner;
 | 
|---|
 | 144 |   runner.addTest( suite );
 | 
|---|
 | 145 | 
 | 
|---|
 | 146 |   // Change the default outputter to a compiler error format outputter
 | 
|---|
 | 147 |   runner.setOutputter( new CppUnit::CompilerOutputter( &runner.result(),
 | 
|---|
 | 148 |                                                        std::cerr ) );
 | 
|---|
 | 149 |   // Run the tests.
 | 
|---|
 | 150 |   bool wasSucessful = runner.run();
 | 
|---|
 | 151 | 
 | 
|---|
 | 152 |   // Return error code 1 if the one of test failed.
 | 
|---|
 | 153 |   return wasSucessful ? 0 : 1;
 | 
|---|
 | 154 | };
 | 
|---|