Action_Thermostats
Add_AtomRandomPerturbation
Add_FitFragmentPartialChargesAction
Add_RotateAroundBondAction
Add_SelectAtomByNameAction
Added_ParseSaveFragmentResults
AddingActions_SaveParseParticleParameters
Adding_Graph_to_ChangeBondActions
Adding_MD_integration_tests
Adding_ParticleName_to_Atom
Adding_StructOpt_integration_tests
AtomFragments
Automaking_mpqc_open
AutomationFragmentation_failures
Candidate_v1.5.4
Candidate_v1.6.0
Candidate_v1.6.1
ChangeBugEmailaddress
ChangingTestPorts
ChemicalSpaceEvaluator
CombiningParticlePotentialParsing
Combining_Subpackages
Debian_Package_split
Debian_package_split_molecuildergui_only
Disabling_MemDebug
Docu_Python_wait
EmpiricalPotential_contain_HomologyGraph
EmpiricalPotential_contain_HomologyGraph_documentation
Enable_parallel_make_install
Enhance_userguide
Enhanced_StructuralOptimization
Enhanced_StructuralOptimization_continued
Example_ManyWaysToTranslateAtom
Exclude_Hydrogens_annealWithBondGraph
FitPartialCharges_GlobalError
Fix_BoundInBox_CenterInBox_MoleculeActions
Fix_ChargeSampling_PBC
Fix_ChronosMutex
Fix_FitPartialCharges
Fix_FitPotential_needs_atomicnumbers
Fix_ForceAnnealing
Fix_IndependentFragmentGrids
Fix_ParseParticles
Fix_ParseParticles_split_forward_backward_Actions
Fix_PopActions
Fix_QtFragmentList_sorted_selection
Fix_Restrictedkeyset_FragmentMolecule
Fix_StatusMsg
Fix_StepWorldTime_single_argument
Fix_Verbose_Codepatterns
Fix_fitting_potentials
Fixes
ForceAnnealing_goodresults
ForceAnnealing_oldresults
ForceAnnealing_tocheck
ForceAnnealing_with_BondGraph
ForceAnnealing_with_BondGraph_continued
ForceAnnealing_with_BondGraph_continued_betteresults
ForceAnnealing_with_BondGraph_contraction-expansion
FragmentAction_writes_AtomFragments
FragmentMolecule_checks_bonddegrees
GeometryObjects
Gui_Fixes
Gui_displays_atomic_force_velocity
ImplicitCharges
IndependentFragmentGrids
IndependentFragmentGrids_IndividualZeroInstances
IndependentFragmentGrids_IntegrationTest
IndependentFragmentGrids_Sole_NN_Calculation
JobMarket_RobustOnKillsSegFaults
JobMarket_StableWorkerPool
JobMarket_unresolvable_hostname_fix
MoreRobust_FragmentAutomation
ODR_violation_mpqc_open
PartialCharges_OrthogonalSummation
PdbParser_setsAtomName
PythonUI_with_named_parameters
QtGui_reactivate_TimeChanged_changes
Recreated_GuiChecks
Rewrite_FitPartialCharges
RotateToPrincipalAxisSystem_UndoRedo
SaturateAtoms_findBestMatching
SaturateAtoms_singleDegree
StoppableMakroAction
Subpackage_CodePatterns
Subpackage_JobMarket
Subpackage_LinearAlgebra
Subpackage_levmar
Subpackage_mpqc_open
Subpackage_vmg
Switchable_LogView
ThirdParty_MPQC_rebuilt_buildsystem
TrajectoryDependenant_MaxOrder
TremoloParser_IncreasedPrecision
TremoloParser_MultipleTimesteps
TremoloParser_setsAtomName
Ubuntu_1604_changes
stable
Last change
on this file since 1a6bda was 88b400, checked in by Frederik Heber <heber@…>, 14 years ago |
converted #define's to enums, consts and typedefs [Meyers, "Effective C++", item 1].
basic changes:
- #define bla 1.3 -> const double bla = 1.3
- #define bla "test" -> const char * const bla = "test
- use class specific constants! (HULLEPSILON)
const int Class::bla = 1.3; (in .cpp)
static const int bla; (in .hpp inside class private section)
- "enum hack": #define bla 5 -> enum { bla = 5 };
- if const int bla=5; impossible
- e.g. necessary if constant is used in array declaration (int blabla[bla];)
details:
- new file defs.cpp where const double reside in and are referenced by extern "C" const double
- joiner.cpp: main() had to be changed due to concatenation of two #define possible, of two const char * not
- class specific constants: HULLEPSILON, BONDTHRESHOLD, SPHERERADIUS
- extended GetPathLengthonCircumCircle to additional parameter HULLEPSILON
|
-
Property mode
set to
100644
|
File size:
1.4 KB
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Line | |
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1 | /*
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2 | * analysis_bonds.hpp
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3 | *
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4 | * Created on: Nov 7, 2009
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5 | * Author: heber
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6 | */
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7 |
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8 | #ifndef ANALYSIS_BONDS_HPP_
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9 | #define ANALYSIS_BONDS_HPP_
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10 |
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11 | using namespace std;
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12 |
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13 | /*********************************************** includes ***********************************/
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14 |
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15 | // include config.h
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16 | #ifdef HAVE_CONFIG_H
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17 | #include <config.h>
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18 | #endif
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19 |
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20 | /*********************************************** defines ***********************************/
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21 |
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22 | const double HBRIDGEDISTANCE=3.5; //!< HBridge distance from PCCP Vol 10. 4802-4813
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23 |
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24 | /****************************************** forward declarations *****************************/
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25 |
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26 | class element;
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27 | class MoleculeListClass;
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28 | class molecule;
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29 |
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30 | /********************************************** declarations *******************************/
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31 |
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32 | void GetMaxMinMeanBondCount(const molecule * const mol, double &Min, double &Mean, double &Max);
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33 | void MinMeanMaxBondDistanceBetweenElements(const molecule *mol, const element *type1, const element *type2, double &Min, double &Mean, double &Max);
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34 |
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35 | int CountHydrogenBridgeBonds(MoleculeListClass * const molecules, const element * InterfaceElement, const element * Interface2Element);
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36 | int CountBondsOfTwo(MoleculeListClass * const molecules, const element * const first, const element * const second);
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37 | int CountBondsOfThree(MoleculeListClass * const molecules, const element * const first, const element * const second, const element * const third);
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38 |
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39 | #endif /* ANALYSIS_BONDS_HPP_ */
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