[bcf653] | 1 | /*
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| 2 | * Project: MoleCuilder
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| 3 | * Description: creates and alters molecular systems
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[0aa122] | 4 | * Copyright (C) 2010-2012 University of Bonn. All rights reserved.
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[94d5ac6] | 5 | *
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| 6 | *
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| 7 | * This file is part of MoleCuilder.
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| 8 | *
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| 9 | * MoleCuilder is free software: you can redistribute it and/or modify
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| 10 | * it under the terms of the GNU General Public License as published by
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| 11 | * the Free Software Foundation, either version 2 of the License, or
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| 12 | * (at your option) any later version.
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| 13 | *
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| 14 | * MoleCuilder is distributed in the hope that it will be useful,
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| 15 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 16 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 17 | * GNU General Public License for more details.
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| 18 | *
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| 19 | * You should have received a copy of the GNU General Public License
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| 20 | * along with MoleCuilder. If not, see <http://www.gnu.org/licenses/>.
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[bcf653] | 21 | */
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| 22 |
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[b47bfc] | 23 | /*
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[0eb7bf3] | 24 | * QtMoleculeList.cpp
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[b47bfc] | 25 | *
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| 26 | * Created on: Jan 21, 2010
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| 27 | * Author: crueger
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| 28 | */
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| 29 |
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[bf3817] | 30 | // include config.h
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| 31 | #ifdef HAVE_CONFIG_H
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| 32 | #include <config.h>
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| 33 | #endif
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[bbbad5] | 34 |
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[f62e60] | 35 | #include "QtMoleculeList.hpp"
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[b47bfc] | 36 |
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[53c1ff] | 37 | #include <QModelIndex>
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[2696b1] | 38 | #include <QDebug>
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[41815a3] | 39 |
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[53c1ff] | 40 | #include "UIElements/Views/Qt4/MoleculeList/QtMoleculeItem.hpp"
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| 41 | #include "UIElements/Views/Qt4/MoleculeList/QtMoleculeItemFactory.hpp"
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| 42 |
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| 43 | #include <boost/bind.hpp>
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[b47bfc] | 44 | #include <iostream>
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| 45 |
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[ad011c] | 46 | #include "CodePatterns/MemDebug.hpp"
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[bbbad5] | 47 |
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[53c1ff] | 48 | #include "CodePatterns/Log.hpp"
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[6770fa] | 49 | #include "CodePatterns/Observer/Notification.hpp"
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| 50 |
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[6f0841] | 51 | #include "Atom/atom.hpp"
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[d2dbb5d] | 52 | #include "Descriptors/MoleculeIdDescriptor.hpp"
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[26cf17] | 53 | #include "Formula.hpp"
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[b47bfc] | 54 | #include "molecule.hpp"
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[42127c] | 55 | #include "MoleculeListClass.hpp"
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[b47bfc] | 56 |
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| 57 | using namespace std;
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| 58 |
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[53c1ff] | 59 | const unsigned int QtMoleculeList::update_times_per_second = 20;
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[b47bfc] | 60 |
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[8ccf3b] | 61 | QtMoleculeList::QtMoleculeList() :
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[53c1ff] | 62 | Observer("QtMoleculeList"),
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| 63 | changing(false),
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| 64 | ChangingChildrensVisibility(false),
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| 65 | list_accessing(false),
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| 66 | update_timer(NULL),
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| 67 | callback_DirtyItems(boost::bind(&QtMoleculeList::informDirtyState, this, _1, _2))
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[b47bfc] | 68 | {
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[53c1ff] | 69 | setColumnCount(QtMoleculeItemFactory::COLUMNCOUNT);
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[b47bfc] | 70 |
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[3eb91c] | 71 | World::getInstance().signOn(this, World::MoleculeInserted);
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| 72 | World::getInstance().signOn(this, World::MoleculeRemoved);
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[41815a3] | 73 |
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[a39006] | 74 | refill();
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[b47bfc] | 75 |
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[8ccf3b] | 76 | // qRegisterMetaType<QItemSelection>("QItemSelection");
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[79b59b] | 77 | //connect(this,SIGNAL(cellChanged(int,int)),this,SLOT(moleculeChanged(int,int)));
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[8ccf3b] | 78 | // connect(selectionModel(),SIGNAL(selectionChanged(QItemSelection, QItemSelection)),this,SLOT(rowsSelected(QItemSelection, QItemSelection)));
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[2696b1] | 79 | connect(this, SIGNAL(itemChanged(QStandardItem*)), this, SLOT(checkForVisibilityChange(QStandardItem*)));
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[b47bfc] | 80 | }
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| 81 |
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[0eb7bf3] | 82 | QtMoleculeList::~QtMoleculeList()
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[b47bfc] | 83 | {
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[3eb91c] | 84 | World::getInstance().signOff(this, World::MoleculeInserted);
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| 85 | World::getInstance().signOff(this, World::MoleculeRemoved);
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[b47bfc] | 86 | }
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| 87 |
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[1c3390] | 88 | QVariant QtMoleculeList::headerData(int section, Qt::Orientation orientation, int role) const
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| 89 | {
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| 90 | if (role == Qt::DisplayRole) {
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| 91 | if (orientation == Qt::Horizontal) {
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[53c1ff] | 92 | if (section < QtMoleculeItemFactory::COLUMNTYPES_MAX)
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| 93 | return QString(QtMoleculeItemFactory::COLUMNNAMES[section]);
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[1c3390] | 94 | }
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| 95 | }
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| 96 | return QVariant();
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| 97 | }
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| 98 |
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[0eb7bf3] | 99 | void QtMoleculeList::update(Observable *publisher) {
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[3eb91c] | 100 | ASSERT(0,
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| 101 | "QtMoleculeList::update() - we did not sign up for any global updates.");
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| 102 | }
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| 103 |
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[53c1ff] | 104 | QtMoleculeItem * QtMoleculeList::MoleculeToItem(const molecule * const _mol) const
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[8ccf3b] | 105 | {
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| 106 | MoleculeItemBiMap_t::left_const_iterator iter =
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| 107 | MoleculeItemBiMap.left.find(_mol);
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[d2dbb5d] | 108 | if( iter != MoleculeItemBiMap.left.end())
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| 109 | return iter->second;
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| 110 | else
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| 111 | return NULL;
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[8ccf3b] | 112 | }
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| 113 |
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[53c1ff] | 114 | const molecule * const QtMoleculeList::ItemToMolecule(const QtMoleculeItem * const _item) const
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| 115 | {
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| 116 | const MoleculeItemBiMap_t::right_const_iterator iter =
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| 117 | MoleculeItemBiMap.right.find(const_cast<QtMoleculeItem * const>(_item));
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[d2dbb5d] | 118 | if (iter != MoleculeItemBiMap.right.end())
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| 119 | return iter->second;
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| 120 | else
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| 121 | return NULL;
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[53c1ff] | 122 | }
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| 123 |
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| 124 | const molecule * const QtMoleculeList::IndexToMolecule(const QModelIndex &_index) const
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| 125 | {
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| 126 | QtMoleculeItem * const item = dynamic_cast<QtMoleculeItem *>(itemFromIndex(_index));
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| 127 | if (item == NULL)
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| 128 | return NULL;
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| 129 | else
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| 130 | return ItemToMolecule(item);
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| 131 | }
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| 132 |
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[6770fa] | 133 | void QtMoleculeList::recieveNotification(Observable *publisher, Notification_ptr notification)
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| 134 | {
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| 135 | if (dynamic_cast<World *>(publisher) != NULL) {
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| 136 | switch (notification->getChannelNo()) {
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| 137 | case World::MoleculeInserted:
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| 138 | {
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| 139 | const molecule * const mol = World::getInstance().lastChanged<molecule>();
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[53c1ff] | 140 | while(list_accessing);
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| 141 | list_accessing = true;
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| 142 | newItems.push_back( mol );
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| 143 | list_accessing = false;
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[6770fa] | 144 | break;
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| 145 | }
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| 146 | case World::MoleculeRemoved:
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| 147 | {
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| 148 | const molecule * const mol = World::getInstance().lastChanged<molecule>();
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[53c1ff] | 149 |
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| 150 | while(list_accessing);
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| 151 | list_accessing = true;
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| 152 | toBeRemovedItems.push_back( mol ); // remove in any case, as we also got insert
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| 153 | list_accessing = false;
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| 154 |
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| 155 | const QtMoleculeItem *mol_item = MoleculeToItem(mol);
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| 156 | if (mol_item != NULL) {
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| 157 | QStandardItem *parent_item = mol_item->parent();
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| 158 | if (parent_item != NULL)
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| 159 | addToBeSetOccurrence( parent_item );
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| 160 | else
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| 161 | ELOG(2, "QtMoleculeList::recieveNotification() - item to molecule "
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| 162 | +toString(mol)+" has no parent.");
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| 163 | }
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[6770fa] | 164 | break;
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| 165 | }
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| 166 | default:
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| 167 | ASSERT(0, "QtMoleculeList::recieveNotification() - cannot get here, not subscribed to channel "
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| 168 | +toString(notification->getChannelNo()));
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| 169 | break;
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| 170 | }
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| 171 | }
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[a39006] | 172 | }
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| 173 |
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[6770fa] | 174 | void QtMoleculeList::addGroupItem(
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[8ccf3b] | 175 | QStandardItem *&mainitem,
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[6770fa] | 176 | const std::string &_molecule_formula)
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| 177 | {
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[53c1ff] | 178 | QList<QStandardItem *> groupItems =
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| 179 | QtMoleculeItemFactory::getInstance().createGroupItems(_molecule_formula);
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| 180 | mainitem = groupItems.front();
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[8ccf3b] | 181 | formula.insert( std::make_pair(_molecule_formula, mainitem) );
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| 182 | invisibleRootItem()->appendRow(groupItems);
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[53c1ff] | 183 | }
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| 184 |
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| 185 | void QtMoleculeList::addToBeSetOccurrence(
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| 186 | QStandardItem *_groupitem)
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| 187 | {
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| 188 | while (list_accessing);
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| 189 | list_accessing = true;
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| 190 | toBeSetOccurrenceItems.insert( _groupitem );
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| 191 | list_accessing = false;
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[6770fa] | 192 | }
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| 193 |
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| 194 | void QtMoleculeList::addMoleculeItem(
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[8ccf3b] | 195 | QStandardItem *_groupitem,
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[53c1ff] | 196 | const molecule * const _mol,
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[6770fa] | 197 | const std::string &_molecule_formula)
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| 198 | {
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[53c1ff] | 199 | QList<QStandardItem *> molItems =
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| 200 | QtMoleculeItemFactory::getInstance().createMoleculeItems(_mol, callback_DirtyItems);
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| 201 | QtMoleculeItem *mol_item = dynamic_cast<QtMoleculeItem *>(molItems.front());
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| 202 | ASSERT( mol_item != NULL,
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| 203 | "QtMoleculeList::addMoleculeItem() - item from factory was not a QtMoleculeItem?");
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| 204 | MoleculeItemBiMap.left.insert( std::make_pair(_mol, mol_item) );
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[2050b2] | 205 | // LOG(1, "Inserting molecule " << _mol->getId() << ": " << _mol);
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[8ccf3b] | 206 | _groupitem->appendRow(molItems);
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[53c1ff] | 207 |
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| 208 | // here update for the occurence will happen "one tick" later, but we don't
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| 209 | // have the groupitem any time earlier
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| 210 | addToBeSetOccurrence(_groupitem);
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[6770fa] | 211 | }
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| 212 |
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[53c1ff] | 213 | void QtMoleculeList::addMolecule(const molecule * const _mol)
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[6770fa] | 214 | {
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| 215 | // find group if already in list
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[8ccf3b] | 216 | QStandardItem *groupItem = NULL;
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[6770fa] | 217 |
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| 218 | const std::string &molecule_formula = _mol->getFormula().toString();
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| 219 | FormulaTreeItemMap_t::const_iterator formulaiter =
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| 220 | formula.find(molecule_formula);
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| 221 |
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| 222 | // new molecule type -> create new group
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| 223 | if (formulaiter == formula.end()){
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| 224 | // insert new formula entry into visibility
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| 225 | #ifndef NDEBUG
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| 226 | std::pair< FormulaVisibilityCountMap_t::iterator, bool> visibilityinserter =
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| 227 | #endif
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| 228 | FormulaVisibilityCountMap.insert(
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| 229 | std::make_pair( molecule_formula, (unsigned int)0) );
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| 230 | ASSERT( visibilityinserter.second,
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| 231 | "QtMoleculeList::refill() - molecule with formula "
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| 232 | +molecule_formula+" already in FormulaVisibilityCountMap.");
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| 233 |
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| 234 | // create item and place into Map with formula as key
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| 235 | addGroupItem(groupItem, molecule_formula);
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| 236 | } else {
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| 237 | groupItem = formulaiter->second;
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| 238 | }
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| 239 | ASSERT( groupItem != NULL,
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[53c1ff] | 240 | "QtMoleculeList::addMolecule() - item with id "+toString(_mol->getId())
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[6770fa] | 241 | +" has not parent?");
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| 242 |
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| 243 | // add molecule
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| 244 | addMoleculeItem(groupItem, _mol, molecule_formula);
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| 245 | }
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| 246 |
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[53c1ff] | 247 | void QtMoleculeList::removeItem(QtMoleculeItem * const _item)
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[6770fa] | 248 | {
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[53c1ff] | 249 | const QModelIndex mol_index = indexFromItem(_item);
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| 250 | QStandardItem *groupitem = _item->parent();
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| 251 | const QModelIndex group_index = groupitem->index();
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| 252 | removeRows(mol_index.row(), 1, group_index);
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| 253 | MoleculeItemBiMap_t::right_iterator removeiter =
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| 254 | MoleculeItemBiMap.right.find(_item);
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| 255 | ASSERT( removeiter != MoleculeItemBiMap.right.end(),
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| 256 | "QtMoleculeList::removeItem() - could not find item in BiMap.");
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| 257 | LOG(1, "Erasing molecule " << (removeiter->second));
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| 258 | MoleculeItemBiMap.right.erase(removeiter);
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| 259 |
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| 260 | // don't need to, groupitem is already present in toBeSetOccurrenceItems
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| 261 | // addToBeSetOccurrence(_groupitem);
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| 262 | }
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[6770fa] | 263 |
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[53c1ff] | 264 | void QtMoleculeList::refill()
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| 265 | {
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| 266 | // check timer's presence
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| 267 | if (update_timer == NULL) {
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| 268 | update_timer = new QTimer(this);
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| 269 | connect( update_timer, SIGNAL(timeout()), this, SLOT(checkState()));
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| 270 | } else
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| 271 | update_timer->stop();
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[6770fa] | 272 |
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[53c1ff] | 273 | changing = true;
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[3eb91c] | 274 |
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[41815a3] | 275 | const std::vector<molecule*> &molecules = World::getInstance().getAllMolecules();
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| 276 |
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[79b59b] | 277 | clear();
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[3eb91c] | 278 | formula.clear();
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| 279 | FormulaVisibilityCountMap.clear();
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[2050b2] | 280 | // LOG(1, "Clearing list.");
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[8ccf3b] | 281 | MoleculeItemBiMap.clear();
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[53c1ff] | 282 | dirtyItems.clear();
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[2696b1] | 283 | visibilityItems.clear();
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[53c1ff] | 284 | toBeMovedItems.clear();
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| 285 | newItems.clear();
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| 286 | toBeRemovedItems.clear();
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| 287 | toBeSetOccurrenceItems.clear();
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[2696b1] | 288 | toBeSetVisibilityItems.clear();
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[79b59b] | 289 |
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[41815a3] | 290 | for (std::vector<molecule*>::const_iterator iter = molecules.begin();
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| 291 | iter != molecules.end();
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[53c1ff] | 292 | iter++)
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| 293 | addMolecule(*iter);
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[b47bfc] | 294 |
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[53c1ff] | 295 | changing = false;
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| 296 |
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| 297 | // activate timer
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| 298 | update_timer->start(1000/update_times_per_second);
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[a39006] | 299 | }
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| 300 |
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[53c1ff] | 301 | bool QtMoleculeList::areAnyItemsDirty()
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[a39006] | 302 | {
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[53c1ff] | 303 | // get whether any items are dirty
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| 304 | while (list_accessing);
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| 305 | list_accessing = true;
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| 306 | bool dirty = false;
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| 307 | dirty |= !dirtyItems.empty();
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[2696b1] | 308 | dirty |= !visibilityItems.empty();
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[53c1ff] | 309 | dirty |= !newItems.empty();
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| 310 | dirty |= !toBeRemovedItems.empty();
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| 311 | dirty |= !toBeSetOccurrenceItems.empty();
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[2696b1] | 312 | dirty |= !toBeSetVisibilityItems.empty();
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[53c1ff] | 313 | list_accessing = false;
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| 314 | return dirty;
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[b47bfc] | 315 | }
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| 316 |
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[53c1ff] | 317 | void QtMoleculeList::checkState()
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| 318 | {
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| 319 | const bool dirty = areAnyItemsDirty();
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| 320 | // update if required
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| 321 | if (dirty)
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| 322 | updateItemStates();
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[b47bfc] | 323 | }
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| 324 |
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[53c1ff] | 325 | void QtMoleculeList::subjectKilled(Observable *publisher)
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| 326 | {}
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| 327 |
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[2696b1] | 328 | void QtMoleculeList::checkForVisibilityChange(QStandardItem* _item)
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[739ee9] | 329 | {
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[2050b2] | 330 | // qDebug() << "Item changed called.";
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[2696b1] | 331 |
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| 332 | if (_item->index().column() == QtMoleculeItemFactory::VISIBILITY) {
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[2050b2] | 333 | // qDebug() << "visibilityItem changed: " << (_item->checkState() ? "checked" : "unchecked");
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[2696b1] | 334 | while(list_accessing);
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| 335 | list_accessing = true;
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| 336 | if ((_item->parent() == NULL) || (_item->parent() == invisibleRootItem()))
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| 337 | toBeSetVisibilityItems.insert( _item );
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| 338 | else
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| 339 | visibilityItems.insert( dynamic_cast<QtMoleculeItem *>(_item) );
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| 340 | list_accessing = false;
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| 341 | }
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| 342 | }
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[3eb91c] | 343 |
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[2696b1] | 344 | void QtMoleculeList::setVisibilityForMoleculeItem(QtMoleculeItem* _item)
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| 345 | {
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| 346 | if (ChangingChildrensVisibility)
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| 347 | return;
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[3eb91c] | 348 |
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[2696b1] | 349 | const bool visible = _item->checkState();
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| 350 | const std::string &molecule_formula = _item->getMolecule()->getFormula().toString();
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| 351 | ASSERT( FormulaVisibilityCountMap.count(molecule_formula) != 0,
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| 352 | "QtMoleculeList::setVisibilityForMoleculeItem() - molecule with formula " +molecule_formula
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| 353 | +" is not present in FormulaVisibilityCountMap.");
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[3eb91c] | 354 |
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[2696b1] | 355 | // get parent
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| 356 | QStandardItem *groupItem = _item->parent();
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| 357 | QStandardItem *visgroupItem =
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| 358 | invisibleRootItem()->child(groupItem->index().row(), QtMoleculeItemFactory::VISIBILITY);
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| 359 | ASSERT( groupItem != NULL,
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| 360 | "QtMoleculeList::setVisibilityForMoleculeItem() - item with id "
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| 361 | +toString(_item->getMolecule()->getId())+" has not parent?");
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| 362 | // check whether we have to set the group item
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| 363 |
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| 364 | ChangingChildrensVisibility = true;
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| 365 | if (visible) {
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| 366 | ++(FormulaVisibilityCountMap[molecule_formula]);
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| 367 | // compare with occurence/total number of molecules
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| 368 | if (FormulaVisibilityCountMap[molecule_formula] ==
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| 369 | (unsigned int)(groupItem->rowCount()))
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| 370 | visgroupItem->setCheckState(Qt::Checked);
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| 371 | } else {
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| 372 | --(FormulaVisibilityCountMap[molecule_formula]);
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| 373 | // none selected anymore?
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| 374 | if (FormulaVisibilityCountMap[molecule_formula] == 0)
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| 375 | visgroupItem->setCheckState(Qt::Unchecked);
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| 376 | }
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| 377 | ChangingChildrensVisibility = false;
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[3eb91c] | 378 |
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[2696b1] | 379 | emit moleculesVisibilityChanged(_item->getMolecule()->getId(), visible);
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| 380 | }
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[3eb91c] | 381 |
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[2696b1] | 382 | void QtMoleculeList::setVisibilityForGroupItem(QStandardItem* _item)
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| 383 | {
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| 384 | if (ChangingChildrensVisibility)
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| 385 | return;
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| 386 |
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| 387 | ChangingChildrensVisibility = true;
|
---|
| 388 |
|
---|
| 389 | // go through all children, but don't enter for groupItem once more
|
---|
| 390 | const bool visible = _item->checkState();
|
---|
| 391 | QStandardItem *groupitem = invisibleRootItem()->child(
|
---|
| 392 | _item->index().row(), QtMoleculeItemFactory::NAME);
|
---|
| 393 | for (int i=0;i<groupitem->rowCount();++i) {
|
---|
| 394 | QtMoleculeItem *molItem = dynamic_cast<QtMoleculeItem *>(
|
---|
| 395 | groupitem->child(i, QtMoleculeItemFactory::VISIBILITY));
|
---|
| 396 | if (molItem->checkState() != visible) {
|
---|
| 397 | molItem->setCheckState(visible ? Qt::Checked : Qt::Unchecked);
|
---|
| 398 |
|
---|
| 399 | // emit signal
|
---|
| 400 | emit moleculesVisibilityChanged(molItem->getMolecule()->getId(), visible);
|
---|
[3eb91c] | 401 | }
|
---|
[2696b1] | 402 | }
|
---|
| 403 | // set current number of visible children
|
---|
| 404 | const std::string molecule_formula =
|
---|
| 405 | invisibleRootItem()->child(_item->row(), QtMoleculeItemFactory::NAME)->text().toStdString();
|
---|
| 406 | FormulaVisibilityCountMap_t::iterator countiter =
|
---|
| 407 | FormulaVisibilityCountMap.find(molecule_formula);
|
---|
| 408 | ASSERT( countiter != FormulaVisibilityCountMap.end(),
|
---|
| 409 | "QtMoleculeList::setVisibilityForGroupItem() - molecules "+molecule_formula
|
---|
| 410 | +" have no entry in visibility count map?");
|
---|
| 411 | countiter->second = visible ? groupitem->rowCount() : 0;
|
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| 412 |
|
---|
| 413 | ChangingChildrensVisibility = false;
|
---|
[739ee9] | 414 | }
|
---|
[2696b1] | 415 |
|
---|
[739ee9] | 416 |
|
---|
[0eb7bf3] | 417 | void QtMoleculeList::moleculeChanged() {
|
---|
[79b59b] | 418 | /*int idx = verticalHeaderItem(row)->data(Qt::UserRole).toInt();
|
---|
[b47bfc] | 419 | molecule *mol = molecules->ReturnIndex(idx);
|
---|
[53c1ff] | 420 | string cellValue = item(row,QtMoleculeItemFactory::NAME)->text().toStdString();
|
---|
[b47bfc] | 421 | if(mol->getName() != cellValue && cellValue !="") {
|
---|
| 422 | mol->setName(cellValue);
|
---|
| 423 | }
|
---|
| 424 | else if(cellValue==""){
|
---|
[53c1ff] | 425 | item(row,QtMoleculeItemFactory::NAME)->setText(QString(mol->getName().c_str()));
|
---|
[79b59b] | 426 | }*/
|
---|
[b47bfc] | 427 | }
|
---|
| 428 |
|
---|
[b14efe] | 429 |
|
---|
[53c1ff] | 430 | int QtMoleculeList::setOccurrence(QStandardItem * const _groupitem)
|
---|
| 431 | {
|
---|
| 432 | QModelIndex modelindex = _groupitem->index();
|
---|
| 433 | ASSERT( modelindex.isValid(),
|
---|
| 434 | "QtMoleculeList::setOccurrence() - groupitem not associated to model anymore.");
|
---|
| 435 | const int index = modelindex.row();
|
---|
| 436 | QStandardItem *parent_item =
|
---|
| 437 | _groupitem->parent() == NULL ? invisibleRootItem() : _groupitem->parent();
|
---|
| 438 | ASSERT( parent_item != NULL,
|
---|
| 439 | "QtMoleculeList::setOccurrence() - group item at "+toString(index)
|
---|
| 440 | +" does not have a parent?");
|
---|
| 441 | QStandardItem *occ_item = parent_item->child(index, QtMoleculeItemFactory::OCCURRENCE);
|
---|
| 442 | ASSERT( occ_item != NULL,
|
---|
| 443 | "QtMoleculeList::setOccurrence() - group item at "+toString(index)
|
---|
| 444 | +" does not have an occurrence?");
|
---|
| 445 | const int count = _groupitem->rowCount();
|
---|
| 446 | if (count == 0) {
|
---|
| 447 | // we have to remove the group item completely
|
---|
| 448 | const std::string molecule_formula = _groupitem->text().toStdString();
|
---|
| 449 | formula.erase(molecule_formula);
|
---|
| 450 | FormulaVisibilityCountMap.erase(molecule_formula);
|
---|
| 451 | return index;
|
---|
| 452 | } else {
|
---|
| 453 | occ_item->setText(QString::number(count));
|
---|
| 454 | return -1;
|
---|
| 455 | }
|
---|
| 456 | }
|
---|
| 457 |
|
---|
| 458 | void QtMoleculeList::readdItem(QtMoleculeItem *_molitem)
|
---|
| 459 | {
|
---|
| 460 | // use takeRows of molecule ..
|
---|
| 461 | QStandardItem *groupitem = _molitem->parent();
|
---|
| 462 | ASSERT( groupitem != NULL,
|
---|
| 463 | "QtMoleculeList::readdItem() - mol item at "+toString(_molitem->index().row())
|
---|
| 464 | +" does not have a groupitem?");
|
---|
| 465 | QList<QStandardItem *> mol_row = _molitem->parent()->takeRow(_molitem->index().row());
|
---|
| 466 | // call setOccurrence on the old group later
|
---|
| 467 | addToBeSetOccurrence(groupitem);
|
---|
| 468 | // .. and re-add where new formula fits
|
---|
| 469 | const std::string molecule_formula = _molitem->getMolecule()->getFormula().toString();
|
---|
| 470 | FormulaTreeItemMap_t::iterator iter = formula.find(molecule_formula);
|
---|
| 471 | if (iter == formula.end()) {
|
---|
| 472 | // add new group item and formula entry
|
---|
| 473 | addGroupItem(groupitem, molecule_formula);
|
---|
| 474 | } else {
|
---|
| 475 | groupitem = iter->second;
|
---|
| 476 | }
|
---|
| 477 | ASSERT( groupitem != NULL,
|
---|
| 478 | "QtMoleculeList::readdItem() - failed to create a sensible new groupitem");
|
---|
| 479 | // finally add again
|
---|
| 480 | groupitem->appendRow(mol_row);
|
---|
| 481 | // call setOccurrence on the new group later
|
---|
| 482 | addToBeSetOccurrence(groupitem);
|
---|
| 483 | }
|
---|
| 484 |
|
---|
| 485 | void QtMoleculeList::informDirtyState(
|
---|
| 486 | QtMoleculeItem *_item,
|
---|
| 487 | const QtMoleculeItem::MoveTypes _type)
|
---|
| 488 | {
|
---|
| 489 | while (list_accessing);
|
---|
| 490 | list_accessing = true;
|
---|
| 491 |
|
---|
| 492 | dirtyItems.insert(_item);
|
---|
| 493 | if (_type == QtMoleculeItem::NeedsMove) {
|
---|
| 494 | // we have to convert whatever item raised the dirty signal to the first
|
---|
| 495 | // item in the row as otherwise multiple items in the row are selected
|
---|
| 496 | // as to be moved, i.e. the same row is moved multiple times
|
---|
| 497 | QStandardItem *group_item = _item->parent();
|
---|
| 498 | QtMoleculeItem *mol_item =
|
---|
| 499 | dynamic_cast<QtMoleculeItem *>(group_item->child(_item->row(), 0));
|
---|
| 500 | toBeMovedItems.insert(mol_item);
|
---|
| 501 | // // add group item, too
|
---|
| 502 | // toBeSetOccurrenceItems.insert(group_item);
|
---|
| 503 | }
|
---|
| 504 |
|
---|
| 505 | list_accessing = false;
|
---|
| 506 | }
|
---|
| 507 |
|
---|
| 508 | void QtMoleculeList::updateItemStates()
|
---|
| 509 | {
|
---|
| 510 | // wait till initial refill has been executed
|
---|
| 511 | if (changing)
|
---|
[41815a3] | 512 | return;
|
---|
| 513 |
|
---|
[53c1ff] | 514 | changing = true;
|
---|
| 515 |
|
---|
| 516 | /// copy lists such that new signals for dirty/.. may come in right away
|
---|
| 517 | // TODO: if we had move semantics ...
|
---|
| 518 | while (list_accessing);
|
---|
| 519 | list_accessing = true;
|
---|
| 520 | list_of_items_t dirtyItems_copy = dirtyItems;
|
---|
| 521 | dirtyItems.clear();
|
---|
[2696b1] | 522 | list_of_items_t visibilityItems_copy = visibilityItems;
|
---|
| 523 | visibilityItems.clear();
|
---|
[53c1ff] | 524 | list_of_items_t toBeMovedItems_copy = toBeMovedItems;
|
---|
| 525 | toBeMovedItems.clear();
|
---|
| 526 | std::vector<const molecule *> newItems_copy = newItems;
|
---|
| 527 | newItems.clear();
|
---|
| 528 | std::vector<const molecule *> toBeRemovedItems_copy = toBeRemovedItems;
|
---|
| 529 | toBeRemovedItems.clear();
|
---|
| 530 | std::set<QStandardItem*> toBeSetOccurrenceItems_copy = toBeSetOccurrenceItems;
|
---|
| 531 | toBeSetOccurrenceItems.clear();
|
---|
[2696b1] | 532 | std::set<QStandardItem*> toBeSetVisibilityItems_copy = toBeSetVisibilityItems;
|
---|
| 533 | toBeSetVisibilityItems.clear();
|
---|
[53c1ff] | 534 | list_accessing = false;
|
---|
| 535 |
|
---|
| 536 | /// first check consistency among the sets:
|
---|
| 537 | /// -# if we remove an item, we don't have to update it before anymore
|
---|
| 538 | /// -# if we remove an item, we don't have to move it before anymore
|
---|
| 539 | /// -# if we remove an item, we don't have to change its visibility
|
---|
| 540 | /// -# don't add molecule that are also removed
|
---|
| 541 |
|
---|
| 542 | // // remove molecules added and removed immediately in both lists
|
---|
| 543 | std::vector<const molecule *> addedremoved;
|
---|
| 544 | std::sort(newItems_copy.begin(), newItems_copy.end());
|
---|
| 545 | std::sort(toBeRemovedItems_copy.begin(), toBeRemovedItems_copy.end());
|
---|
| 546 | std::set_intersection(
|
---|
| 547 | newItems_copy.begin(), newItems_copy.end(),
|
---|
| 548 | toBeRemovedItems_copy.begin(), toBeRemovedItems_copy.end(),
|
---|
| 549 | std::back_inserter(addedremoved));
|
---|
[d7cad1] | 550 | {
|
---|
[53c1ff] | 551 | std::vector<const molecule *>::iterator removeiter = std::set_difference(
|
---|
| 552 | newItems_copy.begin(), newItems_copy.end(),
|
---|
| 553 | addedremoved.begin(), addedremoved.end(),
|
---|
| 554 | newItems_copy.begin());
|
---|
| 555 | newItems_copy.erase(removeiter, newItems_copy.end());
|
---|
[d7cad1] | 556 | }
|
---|
| 557 | {
|
---|
[53c1ff] | 558 | std::vector<const molecule *>::iterator removeiter = std::set_difference(
|
---|
| 559 | toBeRemovedItems_copy.begin(), toBeRemovedItems_copy.end(),
|
---|
| 560 | addedremoved.begin(), addedremoved.end(),
|
---|
| 561 | toBeRemovedItems_copy.begin());
|
---|
| 562 | toBeRemovedItems_copy.erase(removeiter, toBeRemovedItems_copy.end());
|
---|
[d7cad1] | 563 | }
|
---|
[53c1ff] | 564 | addedremoved.clear();
|
---|
[41815a3] | 565 |
|
---|
[53c1ff] | 566 | for (std::vector<const molecule *>::iterator removeiter = toBeRemovedItems_copy.begin();
|
---|
| 567 | removeiter != toBeRemovedItems_copy.end(); ++removeiter) {
|
---|
| 568 | QtMoleculeItem *item = MoleculeToItem(*removeiter);
|
---|
| 569 | dirtyItems_copy.erase(item);
|
---|
| 570 | toBeMovedItems_copy.erase(item);
|
---|
| 571 | }
|
---|
[2696b1] | 572 | for (list_of_items_t::iterator visiter = visibilityItems_copy.begin();
|
---|
| 573 | visiter != visibilityItems_copy.end(); ) {
|
---|
| 574 | QtMoleculeItem * const _item = dynamic_cast<QtMoleculeItem *>(
|
---|
| 575 | (*visiter)->parent()->child(
|
---|
| 576 | (*visiter)->index().row(),
|
---|
| 577 | QtMoleculeItemFactory::NAME));
|
---|
| 578 | const molecule *mol = ItemToMolecule(_item);
|
---|
| 579 | if (std::binary_search(
|
---|
| 580 | toBeRemovedItems_copy.begin(), toBeRemovedItems_copy.end(),
|
---|
| 581 | mol))
|
---|
| 582 | visibilityItems_copy.erase(visiter++);
|
---|
| 583 | else
|
---|
| 584 | ++visiter;
|
---|
| 585 | }
|
---|
[8ccf3b] | 586 |
|
---|
[2696b1] | 587 | /// 1a. do the update for each dirty item
|
---|
[53c1ff] | 588 | for (list_of_items_t::const_iterator dirtyiter = dirtyItems_copy.begin();
|
---|
| 589 | dirtyiter != dirtyItems_copy.end(); ++dirtyiter) {
|
---|
| 590 | LOG(1, "Updating item " << *dirtyiter);
|
---|
| 591 | (*dirtyiter)->updateState();
|
---|
| 592 | }
|
---|
| 593 |
|
---|
[2696b1] | 594 | /// 1b. do the visibility update for each dirty item
|
---|
| 595 | for (list_of_items_t::const_iterator visiter = visibilityItems_copy.begin();
|
---|
| 596 | visiter != visibilityItems_copy.end(); ++visiter) {
|
---|
[2050b2] | 597 | // LOG(1, "Updating visibility of item " << *visiter);
|
---|
[2696b1] | 598 | ASSERT(((*visiter)->parent() != NULL) && ((*visiter)->parent() != invisibleRootItem()),
|
---|
| 599 | "QtMoleculeList::updateItemStates() - a group item ended up in visibilityItems.");
|
---|
| 600 | setVisibilityForMoleculeItem(*visiter);
|
---|
| 601 | }
|
---|
| 602 |
|
---|
[53c1ff] | 603 | /// 2. move all items that need to be moved
|
---|
| 604 | for (list_of_items_t::const_iterator moveiter = toBeMovedItems_copy.begin();
|
---|
| 605 | moveiter != toBeMovedItems_copy.end(); ++moveiter) {
|
---|
[2050b2] | 606 | // LOG(1, "Moving item " << *moveiter);
|
---|
[53c1ff] | 607 | readdItem(*moveiter);
|
---|
| 608 | }
|
---|
| 609 |
|
---|
| 610 | /// 3. remove all items whose molecules have been removed
|
---|
| 611 | for (std::vector<const molecule *>::const_iterator removeiter = toBeRemovedItems_copy.begin();
|
---|
| 612 | removeiter != toBeRemovedItems_copy.end(); ++removeiter) {
|
---|
[2050b2] | 613 | // LOG(1, "Removing molecule " << *removeiter); // cannot access directly, molecule is gone
|
---|
[53c1ff] | 614 | QtMoleculeItem *item = MoleculeToItem(*removeiter);
|
---|
| 615 | if (item != NULL)
|
---|
| 616 | removeItem(item);
|
---|
| 617 | }
|
---|
| 618 |
|
---|
| 619 | /// 4. instantiate all new items
|
---|
| 620 | for (std::vector<const molecule *>::const_iterator moliter = newItems_copy.begin();
|
---|
| 621 | moliter != newItems_copy.end(); ++moliter) {
|
---|
[2050b2] | 622 | // LOG(1, "Adding molecule " << (*moliter)->getName());
|
---|
[53c1ff] | 623 | // check that World knows the molecule still
|
---|
| 624 | const molecule * const mol =
|
---|
| 625 | World::getInstance().getMolecule(MoleculeById((*moliter)->getId()));
|
---|
| 626 | if ((mol != NULL) && (mol == *moliter)) {
|
---|
| 627 | addMolecule(mol);
|
---|
| 628 | }
|
---|
| 629 | }
|
---|
| 630 |
|
---|
[2696b1] | 631 | /// 5a. update the group item's occurrence and visibility
|
---|
[53c1ff] | 632 | std::set<int> RowsToRemove;
|
---|
| 633 | for (std::set<QStandardItem*>::const_iterator groupiter = toBeSetOccurrenceItems_copy.begin();
|
---|
| 634 | groupiter != toBeSetOccurrenceItems_copy.end(); ++groupiter) {
|
---|
[2050b2] | 635 | // LOG(1, "Updating group item " << *groupiter);
|
---|
[53c1ff] | 636 | const int index = setOccurrence(*groupiter);
|
---|
| 637 | if (index != -1)
|
---|
| 638 | RowsToRemove.insert(index);
|
---|
| 639 | }
|
---|
| 640 |
|
---|
[2696b1] | 641 | // remove all visibility updates whose row is removed
|
---|
| 642 | for (std::set<QStandardItem*>::iterator visiter = toBeSetVisibilityItems_copy.begin();
|
---|
| 643 | visiter != toBeSetVisibilityItems_copy.end(); ) {
|
---|
| 644 | if (RowsToRemove.count((*visiter)->index().row()) != 0)
|
---|
| 645 | toBeSetVisibilityItems_copy.erase(visiter++);
|
---|
| 646 | else
|
---|
| 647 | ++visiter;
|
---|
| 648 | }
|
---|
| 649 |
|
---|
| 650 | // update visibility of all group items
|
---|
| 651 | for (std::set<QStandardItem*>::iterator visiter = toBeSetVisibilityItems_copy.begin();
|
---|
| 652 | visiter != toBeSetVisibilityItems_copy.end(); ++visiter) {
|
---|
[2050b2] | 653 | // LOG(1, "Updating visibility of item " << *visiter);
|
---|
[2696b1] | 654 | setVisibilityForGroupItem(*visiter);
|
---|
| 655 | }
|
---|
| 656 |
|
---|
[53c1ff] | 657 | /// 5b. remove all rows with 0 occurrence starting from last
|
---|
| 658 | for (std::set<int>::reverse_iterator riter = RowsToRemove.rbegin();
|
---|
| 659 | riter != RowsToRemove.rend(); ++riter) {
|
---|
[2050b2] | 660 | // LOG(1, "Removing group item at row " << *riter);
|
---|
[53c1ff] | 661 | removeRows(*riter, 1, invisibleRootItem()->index());
|
---|
| 662 | }
|
---|
| 663 |
|
---|
| 664 | // and done
|
---|
| 665 | changing = false;
|
---|
| 666 | }
|
---|