1 | /*
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2 | * Project: MoleCuilder
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3 | * Description: creates and alters molecular systems
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4 | * Copyright (C) 2010-2012 University of Bonn. All rights reserved.
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5 | *
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6 | *
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7 | * This file is part of MoleCuilder.
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8 | *
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9 | * MoleCuilder is free software: you can redistribute it and/or modify
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10 | * it under the terms of the GNU General Public License as published by
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11 | * the Free Software Foundation, either version 2 of the License, or
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12 | * (at your option) any later version.
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13 | *
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14 | * MoleCuilder is distributed in the hope that it will be useful,
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15 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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16 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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17 | * GNU General Public License for more details.
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18 | *
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19 | * You should have received a copy of the GNU General Public License
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20 | * along with MoleCuilder. If not, see <http://www.gnu.org/licenses/>.
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21 | */
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22 |
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23 | /*
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24 | * TextWindow.cpp
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25 | *
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26 | * Created on: Jan 7, 2010
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27 | * Author: crueger
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28 | */
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29 |
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30 | // include config.h
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31 | #ifdef HAVE_CONFIG_H
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32 | #include <config.h>
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33 | #endif
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34 |
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35 | #include "CodePatterns/MemDebug.hpp"
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36 |
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37 | #include <boost/bind.hpp>
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38 | #include <boost/shared_ptr.hpp>
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39 |
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40 | #include "Menu/TextMenu/TextMenu.hpp"
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41 | #include "Menu/TextMenu/TxMenu.hpp"
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42 | #include "Menu/TextMenu/ActionMenuItem.hpp"
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43 | #include "Menu/TextMenu/SeparatorMenuItem.hpp"
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44 | #include "Menu/TextMenu/DisplayMenuItem.hpp"
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45 | #include "Menu/TextMenu/SubMenuItem.hpp"
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46 | #include "TextUI/TextStatusIndicator.hpp"
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47 | #include "TextUI/TextWindow.hpp"
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48 | #include "Actions/MethodAction.hpp"
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49 | #include "Actions/ErrorAction.hpp"
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50 | #include "Actions/ActionQueue.hpp"
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51 | #include "Actions/ActionTrait.hpp"
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52 | #include "Element/element.hpp"
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53 | #include "Element/periodentafel.hpp"
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54 | #include "molecule.hpp"
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55 | #include "Parser/ChangeTracker.hpp"
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56 | #include "Views/StreamStringView.hpp"
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57 | #include "Views/MethodStringView.hpp"
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58 | #include "World.hpp"
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59 |
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60 | #include "Helpers/defs.hpp"
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61 | #include "CodePatterns/Log.hpp"
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62 | #include "CodePatterns/Verbose.hpp"
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63 |
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64 | #include <iostream>
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65 | #include <map>
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66 |
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67 | using namespace MoleCuilder;
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68 |
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69 | // TODO: see what code can be moved to a base class for Graphic and Text Windows
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70 | TextWindow::TextWindow()
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71 | {
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72 | // build the main menu
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73 | main_menu = new TextMenu<TxMenu>(std::cout, "");
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74 | // reserve s for save and q for quite
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75 | main_menu->reserveShortcut('s', "output");
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76 | main_menu->reserveShortcut('q', "quit");
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77 |
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78 | moleculeView = new StreamStringView(boost::bind(&TextWindow::Enumerate,this,_1));
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79 | new DisplayMenuItem(main_menu->getMenuInstance(),moleculeView,"Molecule List");
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80 |
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81 | new SeparatorMenuItem(main_menu->getMenuInstance());
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82 |
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83 | main_menu->init();
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84 |
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85 | new SeparatorMenuItem(main_menu->getMenuInstance());
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86 |
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87 | // save has reserved key 's'
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88 | // const Action &saveConfigAction = ActionQueue::getInstance().getActionByName("output");
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89 | new ActionMenuItem('s',"save current setup to config files",main_menu->getMenuInstance(),"output");
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90 |
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91 | // create a specific quit action for this UI and store in registry
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92 | ActionTrait quitTrait(OptionTrait("quit", &typeid(void), "quits the program"));
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93 | quitAction = new MethodAction(quitTrait,boost::bind(&TxMenu::doQuit,main_menu->getMenuInstance()));
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94 | MoleCuilder::ActionQueue::getInstance().registerAction(quitAction);
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95 | new ActionMenuItem('q',"quit",main_menu->getMenuInstance(),"quit");
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96 |
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97 | // Add status indicators etc...
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98 | statusIndicator = new TextStatusIndicator();
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99 | }
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100 |
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101 | void TextWindow::Enumerate(std::ostream *out)
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102 | {
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103 | periodentafel *periode = World::getInstance().getPeriode();
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104 | std::vector<molecule *> allmolecules = World::getInstance().getAllMolecules();
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105 | std::map<atomicNumber_t,unsigned int> counts;
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106 | double size=0;
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107 | Vector Origin;
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108 |
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109 | // header
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110 | (*out) << "Index\tName\t\tAtoms\tFormula\tCenter\tSize" << endl;
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111 | (*out) << "-----------------------------------------------" << endl;
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112 | if (allmolecules.size() == 0)
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113 | (*out) << "\tNone" << endl;
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114 | else {
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115 | Origin.Zero();
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116 | for (std::vector<molecule *>::const_iterator ListRunner = allmolecules.begin();
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117 | ListRunner != allmolecules.end(); ListRunner++) {
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118 | // count atoms per element and determine size of bounding sphere
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119 | size=0.;
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120 | const molecule *MolRunner = *ListRunner;
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121 | for (molecule::const_iterator iter = MolRunner->begin(); iter != MolRunner->end(); ++iter) {
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122 | counts[(*iter)->getType()->getAtomicNumber()]++;
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123 | if ((*iter)->DistanceSquared(Origin) > size)
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124 | size = (*iter)->DistanceSquared(Origin);
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125 | }
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126 | // output Index, Name, number of atoms, chemical formula
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127 | (*out) << (MolRunner->ActiveFlag ? "*" : " ") << MolRunner->IndexNr << "\t" << MolRunner->name << "\t\t" << MolRunner->getAtomCount() << "\t";
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128 |
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129 | std::map<atomicNumber_t,unsigned int>::reverse_iterator iter;
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130 | for(iter=counts.rbegin(); iter!=counts.rend();++iter){
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131 | atomicNumber_t Z =(*iter).first;
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132 | (*out) << periode->FindElement(Z)->getSymbol() << (*iter).second;
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133 | }
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134 | // Center and size
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135 | Vector Center = MolRunner->DetermineCenterOfAll();
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136 | (*out) << "\t" << Center << "\t" << sqrt(size) << endl;
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137 | }
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138 | }
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139 | }
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140 |
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141 | TextWindow::~TextWindow()
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142 | {
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143 | delete moleculeView;
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144 | delete statusIndicator;
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145 | delete main_menu;
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146 | }
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147 |
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148 | void TextWindow::display() {
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149 | main_menu->display();
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150 | }
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151 |
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