1 | /*
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2 | * Project: MoleCuilder
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3 | * Description: creates and alters molecular systems
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4 | * Copyright (C) 2015 Frederik Heber. All rights reserved.
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5 | *
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6 | *
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7 | * This file is part of MoleCuilder.
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8 | *
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9 | * MoleCuilder is free software: you can redistribute it and/or modify
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10 | * it under the terms of the GNU General Public License as published by
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11 | * the Free Software Foundation, either version 2 of the License, or
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12 | * (at your option) any later version.
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13 | *
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14 | * MoleCuilder is distributed in the hope that it will be useful,
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15 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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16 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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17 | * GNU General Public License for more details.
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18 | *
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19 | * You should have received a copy of the GNU General Public License
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20 | * along with MoleCuilder. If not, see <http://www.gnu.org/licenses/>.
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21 | */
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22 |
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23 | /*
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24 | * QtObservedAtom.cpp
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25 | *
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26 | * Created on: Oct 28, 2015
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27 | * Author: heber
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28 | */
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29 |
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30 |
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31 | // include config.h
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32 | #ifdef HAVE_CONFIG_H
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33 | #include <config.h>
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34 | #endif
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35 |
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36 | #include "QtObservedAtom.hpp"
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37 |
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38 | #include "UIElements/Qt4/InstanceBoard/QtObservedInstanceBoard.hpp"
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39 |
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40 | #include "CodePatterns/MemDebug.hpp"
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41 |
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42 | #include <boost/assign.hpp>
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43 |
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44 | #include "Atom/atom.hpp"
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45 | #include "Bond/bond.hpp"
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46 | #include "Descriptors/AtomIdDescriptor.hpp"
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47 | #include "Element/element.hpp"
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48 | #include "World.hpp"
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49 |
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50 | #include "UIElements/Qt4/InstanceBoard/ObservedValue_wCallback.hpp"
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51 |
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52 | using namespace boost::assign;
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53 |
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54 | static const Observable::channels_t getAtomBondsChannels()
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55 | {
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56 | Observable::channels_t channels;
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57 | channels += AtomObservable::BondsAdded, AtomObservable::BondsRemoved;
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58 | return channels;
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59 | }
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60 |
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61 | static const Observable::channels_t getAllObservedChannels()
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62 | {
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63 | Observable::channels_t channels;
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64 | channels +=
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65 | AtomObservable::IndexChanged,
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66 | AtomObservable::BondsAdded,
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67 | AtomObservable::BondsRemoved,
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68 | AtomObservable::MoleculeChanged,
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69 | AtomObservable::NameChanged,
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70 | AtomObservable::ElementChanged,
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71 | AtomObservable::PositionChanged;
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72 | return channels;
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73 | }
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74 |
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75 | // static entities
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76 | const Observable::channels_t
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77 | QtObservedAtom::AtomIndexChannels(1, AtomObservable::IndexChanged);
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78 | const Observable::channels_t
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79 | QtObservedAtom::AtomBondsChannels(getAtomBondsChannels());
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80 | const Observable::channels_t
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81 | QtObservedAtom::AtomElementChannels(1, AtomObservable::ElementChanged);
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82 | const Observable::channels_t
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83 | QtObservedAtom::AtomMoleculeIndexChannels(1, AtomObservable::MoleculeChanged);
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84 | const Observable::channels_t
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85 | QtObservedAtom::AtomNameChannels(1, AtomObservable::NameChanged);
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86 | const Observable::channels_t
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87 | QtObservedAtom::AtomPositionChannels(1, AtomObservable::PositionChanged);
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88 |
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89 | QtObservedAtom::QtObservedAtom(
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90 | const ObservedValues_t &_ObservedValues,
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91 | QtObservedInstanceBoard &_board,
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92 | QWidget * _parent) :
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93 | QWidget(_parent),
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94 | Observer("QtObservedAtom"),
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95 | subjectKilledCount(0),
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96 | AllsignedOnChannels(getAllObservedChannels().size()),
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97 | signedOffChannels(0),
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98 | owner(NULL),
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99 | board(_board),
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100 | ObservedValues(_ObservedValues)
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101 | {
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102 | // activating Observer is done by ObservedValueContainer when it's prepared
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103 | }
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104 |
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105 | QtObservedAtom::~QtObservedAtom()
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106 | {
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107 | deactivateObserver();
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108 | }
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109 |
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110 | const atom * const QtObservedAtom::getAtomConst(const atomId_t _id)
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111 | {
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112 | const atom * const _atom = const_cast<const World &>(World::getInstance()).
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113 | getAtom(AtomById(_id));
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114 | return _atom;
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115 | }
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116 |
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117 | atom * const QtObservedAtom::getAtom(const atomId_t _id)
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118 | {
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119 | atom * const _atom = World::getInstance().getAtom(AtomById(_id));
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120 | return _atom;
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121 | }
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122 |
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123 | atomId_t QtObservedAtom::updateIndex()
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124 | {
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125 | return const_cast<const World &>(World::getInstance()).lastChangedAtomId();
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126 | }
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127 |
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128 | QtObservedAtom::ListOfBonds_t QtObservedAtom::updateBonds(
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129 | const boost::function<const atomId_t ()> &_getAtomIndex)
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130 | {
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131 | ListOfBonds_t ListOfBonds;
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132 | const atom * const _atom = getAtomConst(_getAtomIndex());
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133 | if (_atom != NULL) {
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134 | // make sure bonds is up-to-date
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135 | const BondList ListBonds = _atom->getListOfBonds();
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136 | for (BondList::const_iterator iter = ListBonds.begin();
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137 | iter != ListBonds.end();
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138 | ++iter)
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139 | ListOfBonds.insert( ListOfBonds.end(), std::make_pair(
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140 | (*iter)->leftatom->getId(),
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141 | (*iter)->rightatom->getId()) );
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142 | }
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143 | return ListOfBonds;
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144 | }
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145 |
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146 | atomicNumber_t QtObservedAtom::updateElement(
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147 | const boost::function<const atomId_t ()> &_getAtomIndex)
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148 | {
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149 | const atom * const _atom = getAtomConst(_getAtomIndex());
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150 | if (_atom != NULL) {
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151 | return _atom->getElementNo();
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152 | } else {
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153 | return (atomicNumber_t)-1;
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154 | }
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155 | }
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156 |
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157 | moleculeId_t QtObservedAtom::updateMoleculeIndex(
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158 | const boost::function<const atomId_t ()> &_getAtomIndex)
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159 | {
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160 | const atom * const _atom = getAtomConst(_getAtomIndex());
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161 | if ((_atom != NULL) && (_atom->getMolecule() != NULL)) {
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162 | return _atom->getMolecule()->getId();
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163 | } else {
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164 | return (moleculeId_t)0;
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165 | }
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166 | }
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167 |
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168 | std::string QtObservedAtom::updateName(
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169 | const boost::function<const atomId_t ()> &_getAtomIndex)
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170 | {
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171 | const atom * const _atom = getAtomConst(_getAtomIndex());
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172 | if (_atom != NULL) {
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173 | return _atom->getName();
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174 | } else {
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175 | return std::string("");
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176 | }
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177 | }
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178 |
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179 | Vector QtObservedAtom::updatePosition(
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180 | const boost::function<const atomId_t ()> &_getAtomIndex)
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181 | {
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182 | const atom * const _atom = getAtomConst(_getAtomIndex());
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183 | if (_atom != NULL) {
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184 | return _atom->getPosition();
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185 | } else {
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186 | return zeroVec;
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187 | }
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188 | }
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189 |
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190 | void QtObservedAtom::update(Observable *publisher)
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191 | {
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192 | ASSERT(0, "QtObservedAtom::update() - we are not signed on for global updates.");
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193 | }
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194 |
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195 | void QtObservedAtom::subjectKilled(Observable *publisher)
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196 | {
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197 | ++signedOffChannels;
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198 |
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199 | if (signedOffChannels == AllsignedOnChannels) {
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200 | // remove owner: no more signOff needed
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201 | owner = NULL;
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202 |
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203 | board.markObservedAtomAsDisconnected(getAtomIndex());
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204 |
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205 | emit atomRemoved();
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206 | }
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207 | }
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208 |
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209 | void QtObservedAtom::recieveNotification(Observable *publisher, Notification_ptr notification)
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210 | {
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211 | // ObservedValues have been updated before, hence convert updates to Qt's signals
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212 | switch (notification->getChannelNo()) {
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213 | case AtomObservable::IndexChanged:
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214 | emit indexChanged();
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215 | break;
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216 | case AtomObservable::BondsAdded:
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217 | case AtomObservable::BondsRemoved:
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218 | emit bondsChanged();
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219 | break;
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220 | case AtomObservable::ElementChanged:
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221 | emit elementChanged();
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222 | break;
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223 | case AtomObservable::MoleculeChanged:
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224 | emit moleculeindexChanged();
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225 | break;
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226 | case AtomObservable::NameChanged:
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227 | emit nameChanged();
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228 | break;
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229 | case AtomObservable::PositionChanged:
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230 | emit positionChanged();
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231 | break;
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232 | default:
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233 | ASSERT(0, "QtObservedAtom::recieveNotification() - we are not signed on to channel "
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234 | +toString(notification->getChannelNo())+" of the atom.");
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235 | break;
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236 | }
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237 | }
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238 |
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239 | void QtObservedAtom::activateObserver()
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240 | {
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241 | atom * atomref = getAtom(getAtomIndex());
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242 | if (atomref != NULL) {
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243 | Observable::channels_t channels = getAllObservedChannels();
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244 | owner = static_cast<const Observable *>(atomref);
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245 | for (Observable::channels_t::const_iterator iter = channels.begin();
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246 | iter != channels.end(); ++iter)
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247 | owner->signOn(this, *iter);
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248 | } else
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249 | signedOffChannels = getAllObservedChannels().size();
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250 | }
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251 |
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252 | void QtObservedAtom::deactivateObserver()
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253 | {
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254 | // sign Off
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255 | if (owner != NULL) {
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256 | Observable::channels_t channels = getAllObservedChannels();
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257 | for (Observable::channels_t::const_iterator iter = channels.begin();
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258 | iter != channels.end(); ++iter)
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259 | owner->signOff(this, *iter);
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260 | owner = NULL;
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261 | signedOffChannels = AllsignedOnChannels;
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262 | board.markObservedAtomAsDisconnected(getAtomIndex());
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263 | }
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264 | }
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265 |
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266 | void QtObservedAtom::initObservedValues(
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267 | ObservedValues_t &_ObservedValues,
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268 | const atomId_t _id,
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269 | const atom * const _atomref,
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270 | const boost::function<void(const atomId_t)> &_subjectKilled)
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271 | {
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272 | /* This is an old note from when the code was still part of cstor's initializer body.
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273 | * TODO: Probably does not apply anymore but has not yet been tested.
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274 | *
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275 | * We must not use boost::cref(this) as "this" has not been properly constructed and seemingly
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276 | * boost::cref tries to do some magic to grasp the inheritance hierarchy which fails because
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277 | * the class has not been fully constructed yet. "This" itself seems to be working fine.
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278 | */
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279 |
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280 | ASSERT( _ObservedValues.size() == MAX_ObservedTypes,
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281 | "QtObservedAtom::initObservedValues() - given ObservedValues has not correct size.");
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282 |
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283 | // fill ObservedValues: index first
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284 | const boost::function<atomId_t ()> AtomIndexUpdater(
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285 | boost::bind(&QtObservedAtom::updateIndex));
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286 |
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287 | ObservedValue_wCallback<atomId_t> * const IndexObservable =
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288 | new ObservedValue_wCallback<atomId_t>(
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289 | _atomref,
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290 | boost::bind(&QtObservedAtom::updateIndex),
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291 | "AtomIndex_"+toString(_id),
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292 | _id,
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293 | AtomIndexChannels,
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294 | _subjectKilled);
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295 | _ObservedValues[AtomIndex] = IndexObservable;
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296 |
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297 | const boost::function<const atomId_t ()> AtomIndexGetter =
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298 | boost::bind(&ObservedValue_wCallback<atomId_t>::get,
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299 | IndexObservable);
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300 |
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301 | // fill ObservedValues: then all the other that need index
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302 | const boost::function<ListOfBonds_t ()> AtomBondsUpdater(
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303 | boost::bind(&QtObservedAtom::updateBonds, AtomIndexGetter));
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304 | const boost::function<atomicNumber_t ()> AtomElementUpdater(
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305 | boost::bind(&QtObservedAtom::updateElement, AtomIndexGetter));
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306 | const boost::function<moleculeId_t ()> AtomMoleculeIndexUpdater(
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307 | boost::bind(&QtObservedAtom::updateMoleculeIndex, AtomIndexGetter));
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308 | const boost::function<std::string ()> AtomNameUpdater(
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309 | boost::bind(&QtObservedAtom::updateName, AtomIndexGetter));
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310 | const boost::function<Vector ()> AtomPositionUpdater(
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311 | boost::bind(&QtObservedAtom::updatePosition, AtomIndexGetter));
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312 |
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313 | _ObservedValues[AtomBonds] = new ObservedValue_wCallback<ListOfBonds_t, atomId_t>(
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314 | _atomref,
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315 | AtomBondsUpdater,
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316 | "AtomBonds_"+toString(_id),
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317 | AtomBondsUpdater(),
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318 | AtomBondsChannels,
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319 | _subjectKilled,
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320 | AtomIndexGetter);
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321 | _ObservedValues[AtomElement] = new ObservedValue_wCallback<atomicNumber_t, atomId_t>(
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322 | _atomref,
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323 | AtomElementUpdater,
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324 | "AtomElement"+toString(_id),
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325 | AtomElementUpdater(),
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326 | AtomElementChannels,
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327 | _subjectKilled,
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328 | AtomIndexGetter);
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329 | _ObservedValues[AtomMoleculeIndex] = new ObservedValue_wCallback<moleculeId_t, atomId_t>(
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330 | _atomref,
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331 | AtomMoleculeIndexUpdater,
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332 | "AtomMoleculeIndex"+toString(_id),
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333 | AtomMoleculeIndexUpdater(),
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334 | AtomMoleculeIndexChannels,
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335 | _subjectKilled,
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336 | AtomIndexGetter);
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337 | _ObservedValues[AtomName] = new ObservedValue_wCallback<std::string, atomId_t>(
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338 | _atomref,
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339 | AtomNameUpdater,
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340 | "AtomName"+toString(_id),
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341 | AtomNameUpdater(),
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342 | AtomNameChannels,
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343 | _subjectKilled,
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344 | AtomIndexGetter);
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345 | _ObservedValues[AtomPosition] = new ObservedValue_wCallback<Vector, atomId_t>(
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346 | _atomref,
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347 | AtomPositionUpdater,
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348 | "AtomPosition_"+toString(_id),
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349 | AtomPositionUpdater(),
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350 | AtomPositionChannels,
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351 | _subjectKilled,
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352 | AtomIndexGetter);
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353 | }
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354 |
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355 | void QtObservedAtom::destroyObservedValues(
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356 | std::vector<boost::any> &_ObservedValues)
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357 | {
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358 | delete boost::any_cast<ObservedValue_wCallback<atomId_t> *>(_ObservedValues[AtomIndex]);
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359 | delete boost::any_cast<ObservedValue_wCallback<ListOfBonds_t, atomId_t> *>(_ObservedValues[AtomBonds]);
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360 | delete boost::any_cast<ObservedValue_wCallback<atomicNumber_t, atomId_t> *>(_ObservedValues[AtomElement]);
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361 | delete boost::any_cast<ObservedValue_wCallback<moleculeId_t, atomId_t> *>(_ObservedValues[AtomMoleculeIndex]);
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362 | delete boost::any_cast<ObservedValue_wCallback<std::string, atomId_t> *>(_ObservedValues[AtomName]);
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363 | delete boost::any_cast<ObservedValue_wCallback<Vector, atomId_t> *>(_ObservedValues[AtomPosition]);
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364 | _ObservedValues.clear();
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365 | }
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366 |
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367 | const atomId_t& QtObservedAtom::getAtomIndex() const
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368 | {
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369 | return boost::any_cast<ObservedValue_wCallback<atomId_t> *>(ObservedValues[AtomIndex])->get();
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370 | }
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371 |
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372 | const QtObservedAtom::ListOfBonds_t& QtObservedAtom::getAtomBonds() const
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373 | {
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374 | return boost::any_cast<ObservedValue_wCallback<ListOfBonds_t, atomId_t> *>(ObservedValues[AtomBonds])->get();
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375 | }
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376 |
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377 | const atomicNumber_t& QtObservedAtom::getAtomElement() const
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378 | {
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379 | return boost::any_cast<ObservedValue_wCallback<atomicNumber_t, atomId_t> *>(ObservedValues[AtomElement])->get();
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380 | }
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381 |
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382 | const moleculeId_t& QtObservedAtom::getAtomMoleculeIndex() const
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383 | {
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384 | return boost::any_cast<ObservedValue_wCallback<moleculeId_t, atomId_t> *>(ObservedValues[AtomMoleculeIndex])->get();
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385 | }
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386 |
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387 | const std::string& QtObservedAtom::getAtomName() const
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388 | {
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389 | return boost::any_cast<ObservedValue_wCallback<std::string, atomId_t> *>(ObservedValues[AtomName])->get();
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390 | }
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391 |
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392 | const Vector& QtObservedAtom::getAtomPosition() const
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393 | {
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394 | return boost::any_cast<ObservedValue_wCallback<Vector, atomId_t> *>(ObservedValues[AtomPosition])->get();
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395 | }
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