| 1 | /*
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| 2 |  * Project: MoleCuilder
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| 3 |  * Description: creates and alters molecular systems
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| 4 |  * Copyright (C)  2010 University of Bonn. All rights reserved.
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| 5 |  * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
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| 6 |  */
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| 7 | 
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| 8 | /*
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| 9 |  * ThermoStatContainer.cpp
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| 10 |  *
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| 11 |  *  Created on: 12.06.2010
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| 12 |  *      Author: heber
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| 13 |  */
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| 14 | 
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| 15 | // include config.h
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| 16 | #ifdef HAVE_CONFIG_H
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| 17 | #include <config.h>
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| 18 | #endif
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| 19 | 
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| 20 | #include "CodePatterns/MemDebug.hpp"
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| 21 | 
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| 22 | #include <cstring>
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| 23 | 
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| 24 | #include "ConfigFileBuffer.hpp"
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| 25 | #include "config.hpp"
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| 26 | #include "CodePatterns/Log.hpp"
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| 27 | #include "ThermoStatContainer.hpp"
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| 28 | #include "CodePatterns/Verbose.hpp"
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| 29 | 
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| 30 | #include <Thermostats/Berendsen.hpp>
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| 31 | #include <Thermostats/GaussianThermostat.hpp>
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| 32 | #include <Thermostats/Langevin.hpp>
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| 33 | #include <Thermostats/NoseHoover.hpp>
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| 34 | #include <Thermostats/NoThermostat.hpp>
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| 35 | #include <Thermostats/Woodcock.hpp>
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| 36 | 
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| 37 | /** Constructor for class ThermoStatContainer.
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| 38 |  *
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| 39 |  */
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| 40 | ThermoStatContainer::ThermoStatContainer() :
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| 41 |   activeThermostat(0),
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| 42 |   TargetTemp(0.00095004455)
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| 43 | {
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| 44 |   ThermostatTraits<Thermostat> *BerendsenTrait = new ThermostatTraits<Berendsen>();
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| 45 |   availThermostats[BerendsenTrait->getName()] = BerendsenTrait;
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| 46 |   ThermostatTraits<Thermostat> *GaussianTrait = new ThermostatTraits<GaussianThermostat>();
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| 47 |   availThermostats[GaussianTrait->getName()] = GaussianTrait;
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| 48 |   ThermostatTraits<Thermostat> *LangevinTrait = new ThermostatTraits<Langevin>();
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| 49 |   availThermostats[LangevinTrait->getName()] = LangevinTrait;
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| 50 |   ThermostatTraits<Thermostat> *NoseHooverTrait = new ThermostatTraits<NoseHoover>();
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| 51 |   availThermostats[NoseHooverTrait->getName()] = NoseHooverTrait;
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| 52 |   ThermostatTraits<Thermostat> *NoThermostatTrait = new ThermostatTraits<NoThermostat>();
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| 53 |   availThermostats[NoThermostatTrait->getName()] = NoThermostatTrait;
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| 54 |   ThermostatTraits<Thermostat> *WoodcockTrait = new ThermostatTraits<Woodcock>();
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| 55 |   availThermostats[WoodcockTrait->getName()] = WoodcockTrait;
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| 56 | 
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| 57 |   // for debugging: list all thermostats
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| 58 | //  cout << "List of known thermostats: ";
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| 59 | //  for(traitsMap::iterator iter = availThermostats.begin();iter!=availThermostats.end();++iter){
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| 60 | //    cout << iter->first << " ";
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| 61 | //  }
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| 62 | //  cout << endl;
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| 63 | 
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| 64 |   ASSERT(availThermostats.size()==6,"Not all implemented thermostats referenced!\nDid you check the names in the traits?");
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| 65 |   activeThermostat=new Berendsen();
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| 66 | }
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| 67 | 
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| 68 | ThermostatTraits<Thermostat> *ThermoStatContainer::getTraitByName(const std::string name){
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| 69 |   if(!availThermostats.count(name))
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| 70 |     return 0;
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| 71 |   return availThermostats[name];
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| 72 | }
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| 73 | 
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| 74 | Thermostat *ThermoStatContainer::makeByName(const std::string name,class ConfigFileBuffer * const fb){
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| 75 |   ThermostatTraits<Thermostat>* trait = getTraitByName(name);
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| 76 |   if(trait){
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| 77 |     Thermostat *res = trait->make(fb);
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| 78 |     res->addToContainer(this);
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| 79 |     return res;
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| 80 |   }
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| 81 |   else{
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| 82 |     return 0;
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| 83 |   }
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| 84 | }
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| 85 | 
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| 86 | void ThermoStatContainer::makeActive(const std::string name,class ConfigFileBuffer * const fb){
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| 87 |   Thermostat* newThermostat = makeByName(name,fb);
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| 88 |   if(newThermostat){
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| 89 |     if(activeThermostat){
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| 90 |       delete activeThermostat;
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| 91 |     }
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| 92 |     activeThermostat = newThermostat;
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| 93 |   }
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| 94 | }
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| 95 | 
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| 96 | void ThermoStatContainer::chooseNone(){
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| 97 |   if(activeThermostat){
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| 98 |     delete activeThermostat;
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| 99 |   }
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| 100 |   activeThermostat = new NoThermostat();
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| 101 | }
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| 102 | 
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| 103 | /** Destructor for Class ThermoStatContainer.
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| 104 |  *
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| 105 |  */
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| 106 | ThermoStatContainer::~ThermoStatContainer()
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| 107 | {
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| 108 |   if(activeThermostat){
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| 109 |     delete activeThermostat;
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| 110 |   }
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| 111 |   for(traitsMap::iterator iter= availThermostats.begin();iter!=availThermostats.end();++iter){
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| 112 |     delete (iter->second);
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| 113 |   }
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| 114 | }
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| 115 | 
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| 116 | 
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