| [7e3f11a] | 1 | /*
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| 2 | * Project: MoleCuilder
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| 3 | * Description: creates and alters molecular systems
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| 4 | * Copyright (C) 2013 Frederik Heber. All rights reserved.
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| 5 | *
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| 6 | *
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| 7 | * This file is part of MoleCuilder.
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| 8 | *
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| 9 | * MoleCuilder is free software: you can redistribute it and/or modify
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| 10 | * it under the terms of the GNU General Public License as published by
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| 11 | * the Free Software Foundation, either version 2 of the License, or
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| 12 | * (at your option) any later version.
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| 13 | *
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| 14 | * MoleCuilder is distributed in the hope that it will be useful,
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| 15 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 16 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 17 | * GNU General Public License for more details.
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| 18 | *
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| 19 | * You should have received a copy of the GNU General Public License
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| 20 | * along with MoleCuilder. If not, see <http://www.gnu.org/licenses/>.
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| 21 | */
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| 22 |
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| 23 | /*
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| 24 | * PythonScripting.cpp
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| 25 | *
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| 26 | * Created on: Aug 26, 2013
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| 27 | * Author: heber
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| 28 | */
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| 29 |
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| 30 | // include config.h
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| 31 | #ifdef HAVE_CONFIG_H
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| 32 | #include <config.h>
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| 33 | #endif
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| 34 |
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| 35 | // boost::python uses placement new which is incompatible with MemDebug.
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| 36 | #include "PythonScripting_impl.hpp"
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| 37 | #include "PythonScripting.hpp"
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| 38 |
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| [a93896] | 39 | #include <string>
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| 40 |
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| [9eb71b3] | 41 | //#include "CodePatterns/MemDebug.hpp"
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| [7e3f11a] | 42 |
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| [2cf12a] | 43 | bool executePythonScriptFile(const boost::filesystem::path &pythonfilename)
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| [7e3f11a] | 44 | {
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| 45 | if (exists(pythonfilename)) {
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| [a963cf] | 46 | // parse file into a string
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| 47 | std::ifstream pythonfile(pythonfilename.string().c_str());
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| 48 | std::string pythonscript( std::istreambuf_iterator<char>(pythonfile),
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| 49 | (std::istreambuf_iterator<char>()) );
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| 50 | return executePythonScript(pythonscript, pythonfilename.string());
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| [7e3f11a] | 51 | }
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| [57388c9] | 52 | return false;
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| [7e3f11a] | 53 | }
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| [2cf12a] | 54 |
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| 55 | bool executePythonScript(const std::string &python_string, const std::string &python_scripttitle)
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| 56 | {
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| [b0060a] | 57 | std::stringstream input(python_string);
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| 58 | std::stringstream buffer_import;
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| 59 | std::stringstream buffer_else;
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| 60 | // move all lines with "import" to the beginning
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| 61 | std::string current_line;
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| [a93896] | 62 | std::string moduleName;
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| [b0060a] | 63 | while(std::getline(input,current_line,'\n')){
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| [a93896] | 64 | if (current_line.find("import ") != std::string::npos) {
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| 65 | if (current_line.find(PYMOLECUILDER_MODULE_NAME) != std::string::npos) {
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| 66 | // ignore a PyMoleCuilder import, use the AS however.
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| 67 | const size_t lowerCaseAsPos = current_line.find("as");
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| 68 | const size_t upperCaseAsPos = current_line.find("AS");
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| 69 | size_t moduleNameStart = std::string::npos;
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| 70 | if (lowerCaseAsPos != std::string::npos)
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| 71 | moduleNameStart = lowerCaseAsPos+2+1;
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| 72 | if (upperCaseAsPos != std::string::npos)
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| 73 | moduleNameStart = upperCaseAsPos+2+1;
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| 74 | if (moduleNameStart != std::string::npos) {
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| 75 | const size_t moduleNameEnd = current_line.find(" ", moduleNameStart);
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| 76 | moduleName = current_line.substr(
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| 77 | moduleNameStart,
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| 78 | moduleNameEnd == std::string::npos ? moduleNameEnd : moduleNameEnd - moduleNameStart
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| 79 | );
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| 80 | ELOG(2, "Ignoring found " << PYMOLECUILDER_MODULE_NAME << " import, but keeping AS name " << moduleName << ".");
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| 81 | } else {
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| 82 | ELOG(2, "Ignoring found " << PYMOLECUILDER_MODULE_NAME << " import.");
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| 83 | }
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| 84 | } else {
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| 85 | buffer_import << current_line << std::endl;
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| 86 | }
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| 87 | } else {
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| [b0060a] | 88 | buffer_else << current_line << std::endl;
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| [a93896] | 89 | }
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| [b0060a] | 90 | }
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| 91 | std::string pythonscript_import( std::istreambuf_iterator<char>(buffer_import),
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| 92 | (std::istreambuf_iterator<char>()) );
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| 93 | std::string pythonscript_else( std::istreambuf_iterator<char>(buffer_else),
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| 94 | (std::istreambuf_iterator<char>()) );
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| 95 |
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| [2cf12a] | 96 | try {
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| [1ca493a] | 97 | #ifdef HAVE_PYTHON2
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| [a93896] | 98 | PyImport_AppendInittab( PYMOLECUILDER_MODULE_NAME.c_str(), &initpyMoleCuilder );
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| [1ca493a] | 99 | #else
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| [a93896] | 100 | PyImport_AppendInittab( PYMOLECUILDER_MODULE_NAME.c_str(), &PyInit_pyMoleCuilder );
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| [1ca493a] | 101 | #endif
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| [2cf12a] | 102 |
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| 103 | Py_Initialize();
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| 104 |
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| 105 | boost::python::object main_module((
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| 106 | boost::python::handle<>(boost::python::borrowed(PyImport_AddModule("__main__")))));
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| 107 |
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| 108 | boost::python::object main_namespace = main_module.attr("__dict__");
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| 109 |
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| [b0060a] | 110 | boost::python::handle<> imported(( PyRun_String( pythonscript_import.c_str(),
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| 111 | Py_file_input,
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| 112 | main_namespace.ptr(),
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| 113 | main_namespace.ptr() ) ));
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| 114 |
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| [2cf12a] | 115 | boost::python::object molecuilder_module( (boost::python::handle<>(PyImport_ImportModule("pyMoleCuilder"))) );
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| [a93896] | 116 | main_namespace[PYMOLECUILDER_MODULE_NAME] = molecuilder_module;
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| 117 | if (moduleName.size() > 0)
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| 118 | main_namespace[moduleName] = molecuilder_module;
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| [2cf12a] | 119 |
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| [1ca493a] | 120 | std::string enveloped_script("print(\"BEGIN of "+python_scripttitle+":\")\n");
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| [b0060a] | 121 | enveloped_script += pythonscript_else+std::string("\n");
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| [1ca493a] | 122 | enveloped_script += std::string("print(\"END of "+python_scripttitle+":\")\n");
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| [2cf12a] | 123 |
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| 124 | boost::python::handle<> ignored(( PyRun_String( enveloped_script.c_str(),
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| 125 | Py_file_input,
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| 126 | main_namespace.ptr(),
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| 127 | main_namespace.ptr() ) ));
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| 128 |
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| 129 | } catch( boost::python::error_already_set ) {
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| 130 | PyErr_Print();
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| 131 | return false;
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| 132 | }
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| 133 | return true;
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| 134 | }
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