source: src/Potentials/Specifics/ConstantPotential.hpp

stable v1.7.0
Last change on this file was a0d8aa, checked in by Frederik Heber <frederik.heber@…>, 2 months ago

PotentialFactory exposes particle type numbers.

  • Also, potentials use getParticleTypeNumber() in asserts.
  • Property mode set to 100644
File size: 6.4 KB
Line 
1/*
2 * ConstantPotential.hpp
3 *
4 * Created on: May 09, 2013
5 * Author: heber
6 */
7
8#ifndef CONSTANTPOTENTIAL_HPP_
9#define CONSTANTPOTENTIAL_HPP_
10
11
12// include config.h
13#ifdef HAVE_CONFIG_H
14#include <config.h>
15#endif
16
17#include <limits>
18
19#include "Potentials/EmpiricalPotential.hpp"
20
21class PotentialFactory;
22class TrainingData;
23
24/** This is the implementation of a constant potential to adapt to any offset
25 * in the potential energy.
26 *
27 * This evaluates \f$ k \f$.
28 *
29 */
30class ConstantPotential :
31 public EmpiricalPotential
32{
33 //!> grant unit test access to internal parts
34 friend class ConstantPotentialTest;
35 //!> grant PotentialFactory access to default cstor
36 friend class PotentialFactory;
37 // some repeated typedefs to avoid ambiguities
38 typedef FunctionModel::list_of_arguments_t list_of_arguments_t;
39 typedef FunctionModel::arguments_t arguments_t;
40 typedef FunctionModel::result_t result_t;
41 typedef FunctionModel::results_t results_t;
42 typedef EmpiricalPotential::derivative_components_t derivative_components_t;
43 typedef FunctionModel::parameters_t parameters_t;
44private:
45 /** Private default constructor.
46 *
47 * This prevents creation of potential without set ParticleTypes_t.
48 *
49 * \note PotentialFactory may use this default cstor
50 *
51 */
52 ConstantPotential();
53
54 /** Creates the binding model specific for this potential.
55 *
56 * Private because this is used internally some of the constructors.
57 *
58 * \param _ParticleTypes particle type for the potential
59 * \return binding model
60 */
61 BindingModel generateBindingModel(const EmpiricalPotential::ParticleTypes_t &_ParticleTypes) const;
62
63public:
64 ConstantPotential(const ParticleTypes_t &_ParticleTypes);
65 ConstantPotential(
66 const ParticleTypes_t &_ParticleTypes,
67 const double _energy_offset);
68 virtual ~ConstantPotential() {}
69
70 /** Setter for parameters as required by FunctionModel interface.
71 *
72 * \param _params given set of parameters
73 */
74 void setParameters(const parameters_t &_params);
75
76 /** Getter for parameters as required by FunctionModel interface.
77 *
78 * \return set of parameters
79 */
80 parameters_t getParameters() const
81 {
82 return params;
83 }
84
85 /** Sets the parameter randomly within the sensible range of each parameter.
86 *
87 * \param data container with training data for guesstimating range
88 */
89 void setParametersToRandomInitialValues(const TrainingData &data);
90
91 /** Getter for the number of parameters of this model function.
92 *
93 * \return number of parameters
94 */
95 size_t getParameterDimension() const
96 {
97 return 1;
98 }
99
100 /** Evaluates the harmonic potential function for the given arguments.
101 *
102 * @param listarguments empty list
103 * @return value of the potential function
104 */
105 results_t operator()(const list_of_arguments_t &listarguments) const;
106
107 /** Evaluates the derivative of the potential function.
108 *
109 * @param listarguments empty list
110 * @return vector with derivative with respect to the input degrees of freedom
111 */
112 derivative_components_t derivative(const list_of_arguments_t &listarguments) const;
113
114 /** Evaluates the derivative of the function with the given \a arguments
115 * with respect to a specific parameter indicated by \a index.
116 *
117 * \param listarguments empty list
118 * \param index derivative of which parameter
119 * \return result vector containing the derivative with respect to the given
120 * input
121 */
122 results_t parameter_derivative(const list_of_arguments_t &listarguments, const size_t index) const;
123
124 /** Returns the functor that converts argument_s into the
125 * internal coordinate described by this potential function.
126 *
127 * \return coordinator functor
128 */
129 Coordinator::ptr getCoordinator() const
130 { return coordinator; }
131
132 /** Return the token name of this specific potential.
133 *
134 * \return token name of the potential
135 */
136 const std::string& getToken() const
137 { return potential_token; }
138
139 /** Returns a vector of parameter names.
140 *
141 * This is required from the specific implementation
142 *
143 * \return vector of strings containing parameter names
144 */
145 const ParameterNames_t& getParameterNames() const
146 { return ParameterNames; }
147
148 /** States whether lower and upper boundaries should be used to constraint
149 * the parameter search for this function model.
150 *
151 * \return true - constraints should be used, false - else
152 */
153 bool isBoxConstraint() const {
154 return true;
155 }
156
157 /** Returns a vector which are the lower boundaries for each parameter_t
158 * of this FunctionModel.
159 *
160 * \return vector of parameter_t resembling lowest allowed values
161 */
162 parameters_t getLowerBoxConstraints() const {
163 parameters_t lowerbound(getParameterDimension(), -std::numeric_limits<double>::max());
164 return lowerbound;
165 }
166
167 /** Returns a vector which are the upper boundaries for each parameter_t
168 * of this FunctionModel.
169 *
170 * \return vector of parameter_t resembling highest allowed values
171 */
172 parameters_t getUpperBoxConstraints() const {
173 return parameters_t(getParameterDimension(), std::numeric_limits<double>::max());
174 }
175
176 /** Returns a bound function to be used with TrainingData, extracting distances
177 * from a Fragment.
178 *
179 * \return bound function extracting distances from a fragment
180 */
181 FunctionModel::filter_t getSpecificFilter() const;
182
183 /** Returns the number of arguments the underlying function requires.
184 *
185 * \return number of arguments of the function
186 */
187 size_t getSpecificArgumentCount() const
188 { return 0; }
189
190 enum parameter_enum_t {
191 energy_offset=0,
192 MAXPARAMS
193 };
194
195 /** Getter for the graph specifying the binding model of the potential.
196 *
197 * \return BindingModel ref of the binding model
198 */
199 const BindingModel& getBindingModel() const
200 { return bindingmodel; }
201
202 /**
203 * Returns the number of particle types associated with the potential.
204 *
205 * \return number of particle types
206 */
207 unsigned int getParticleTypeNumber() const
208 { return 0; }
209
210private:
211 //!> parameter vector with parameters as in enum parameter_enum_t
212 parameters_t params;
213
214 //!> static definitions of the parameter name for this potential
215 static const ParameterNames_t ParameterNames;
216
217 //!> static token of this potential type
218 static const std::string potential_token;
219
220 //!> internal coordinator object for converting arguments_t
221 static Coordinator::ptr coordinator;
222
223 //!> binding model for this potential
224 const BindingModel bindingmodel;
225};
226
227#endif /* CONSTANTPOTENTIAL_HPP_ */
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