source: src/Makefile.am@ 105b72

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Last change on this file since 105b72 was 4d4ef8, checked in by Frederik Heber <heber@…>, 12 years ago

FIX: Enforce binding to libMolecuilderJobs for Server and PoolWorker.

  • otherwise we are puzzled why Server does receive an empty vector of jobs although job id have been transferred flawlessly before. If the library dependency is not listed, the executables cannot instantiate class.
  • the remedy is again to create a static instance. We did this for MPQCCommandJob, VMGJob, and VMGDebugGridJob. Each has a specific _binding header which just has to be included.
  • Property mode set to 100644
File size: 17.5 KB
Line 
1# PLEASE adhere to the alphabetical ordering in this Makefile!
2# Also indentation by a single tab
3
4MOSTLYCLEANFILES =
5lib_LTLIBRARIES =
6noinst_LTLIBRARIES =
7pyexec_LTLIBRARIES =
8BUILT_SOURCES =
9bin_PROGRAMS =
10EXTRA_DIST =
11
12include Actions/Makefile.am
13include Analysis/Makefile.am
14include Atom/Makefile.am
15include Element/Makefile.am
16include Filling/Makefile.am
17include Fragmentation/Makefile.am
18include Fragmentation/Converter/Makefile.am
19include Fragmentation/Summation/Makefile.am
20include Fragmentation/SetValues/Makefile.am
21include FunctionApproximation/Makefile.am
22include Graph/Makefile.am
23include Helpers/Makefile.am
24
25if CONDJOBMARKET
26include Fragmentation/Automation/Makefile.am
27include Jobs/Makefile.am
28include Jobs/Grid/Makefile.am
29endif
30
31include LinkedCell/Makefile.am
32include Parameters/Makefile.am
33include Parser/Makefile.am
34include Potentials/Makefile.am
35include RandomNumbers/Makefile.am
36include Shapes/Makefile.am
37include UIElements/Makefile.am
38
39AM_LDFLAGS = -ldl ${BOOST_LDFLAGS} ${CodePatterns_LDFLAGS}
40AM_CPPFLAGS = ${BOOST_CPPFLAGS} ${CodePatterns_CFLAGS}
41
42BONDSOURCE = \
43 Bond/bond.cpp \
44 Bond/bond_observable.cpp \
45 Bond/BondInfo.cpp \
46 Bond/GraphEdge.cpp
47
48BONDHEADER = \
49 Bond/bond.hpp \
50 Bond/bond_observable.hpp \
51 Bond/BondInfo.hpp \
52 Bond/GraphEdge.hpp
53
54DESCRIPTORSOURCE = \
55 Descriptors/AtomDescriptor.cpp \
56 Descriptors/AtomIdDescriptor.cpp \
57 Descriptors/AtomOfMoleculeDescriptor.cpp \
58 Descriptors/AtomOfMoleculeSelectionDescriptor.cpp \
59 Descriptors/AtomOrderDescriptor.cpp \
60 Descriptors/AtomSelectionDescriptor.cpp \
61 Descriptors/AtomShapeDescriptor.cpp \
62 Descriptors/AtomTypeDescriptor.cpp \
63 Descriptors/AtomsWithinDistanceOfDescriptor.cpp \
64 Descriptors/MoleculeDescriptor.cpp \
65 Descriptors/MoleculeFormulaDescriptor.cpp \
66 Descriptors/MoleculeIdDescriptor.cpp \
67 Descriptors/MoleculeNameDescriptor.cpp \
68 Descriptors/MoleculeOfAtomSelectionDescriptor.cpp \
69 Descriptors/MoleculeOrderDescriptor.cpp \
70 Descriptors/MoleculePtrDescriptor.cpp \
71 Descriptors/MoleculeSelectionDescriptor.cpp
72
73
74DESCRIPTORHEADER = \
75 Descriptors/AtomDescriptor.hpp \
76 Descriptors/AtomIdDescriptor.hpp \
77 Descriptors/AtomOfMoleculeDescriptor.hpp \
78 Descriptors/AtomOfMoleculeSelectionDescriptor.hpp \
79 Descriptors/AtomOrderDescriptor.hpp \
80 Descriptors/AtomSelectionDescriptor.hpp \
81 Descriptors/AtomShapeDescriptor.hpp \
82 Descriptors/AtomTypeDescriptor.hpp \
83 Descriptors/AtomsWithinDistanceOfDescriptor.hpp \
84 Descriptors/DescriptorBase.hpp \
85 Descriptors/MoleculeDescriptor.hpp \
86 Descriptors/MoleculeFormulaDescriptor.hpp \
87 Descriptors/MoleculeIdDescriptor.hpp \
88 Descriptors/MoleculeNameDescriptor.hpp \
89 Descriptors/MoleculeOfAtomSelectionDescriptor.hpp \
90 Descriptors/MoleculeOrderDescriptor.hpp \
91 Descriptors/MoleculePtrDescriptor.hpp \
92 Descriptors/MoleculeSelectionDescriptor.hpp \
93 Descriptors/SelectiveIterator.hpp
94
95DESCRIPTORIMPLHEADER = \
96 Descriptors/AtomDescriptor_impl.hpp \
97 Descriptors/AtomIdDescriptor_impl.hpp \
98 Descriptors/AtomOfMoleculeDescriptor_impl.hpp \
99 Descriptors/AtomOfMoleculeSelectionDescriptor_impl.hpp \
100 Descriptors/AtomOrderDescriptor_impl.hpp \
101 Descriptors/AtomSelectionDescriptor_impl.hpp \
102 Descriptors/AtomShapeDescriptor_impl.hpp \
103 Descriptors/AtomTypeDescriptor_impl.hpp \
104 Descriptors/AtomsWithinDistanceOfDescriptor_impl.hpp \
105 Descriptors/DescriptorBase_impl.hpp \
106 Descriptors/MoleculeDescriptor_impl.hpp \
107 Descriptors/MoleculeFormulaDescriptor_impl.hpp \
108 Descriptors/MoleculeIdDescriptor_impl.hpp \
109 Descriptors/MoleculeNameDescriptor_impl.hpp \
110 Descriptors/MoleculeOfAtomSelectionDescriptor_impl.hpp \
111 Descriptors/MoleculeOrderDescriptor_impl.hpp \
112 Descriptors/MoleculePtrDescriptor_impl.hpp \
113 Descriptors/MoleculeSelectionDescriptor_impl.hpp \
114 Descriptors/SelectiveIterator_impl.hpp
115
116DYNAMICSSOURCE = \
117 Dynamics/MinimiseConstrainedPotential.cpp
118
119DYNAMICSHEADER = \
120 Dynamics/LinearInterpolationBetweenSteps.hpp \
121 Dynamics/MinimiseConstrainedPotential.hpp \
122 Dynamics/OutputTemperature.hpp \
123 Dynamics/VerletForceIntegration.hpp
124
125THERMOSTATSOURCE = \
126 Thermostats/Berendsen.cpp \
127 Thermostats/GaussianThermostat.cpp \
128 Thermostats/Langevin.cpp \
129 Thermostats/NoseHoover.cpp \
130 Thermostats/NoThermostat.cpp \
131 Thermostats/Thermostat.cpp \
132 Thermostats/ThermoStatContainer.cpp \
133 Thermostats/Woodcock.cpp
134
135THERMOSTATHEADER = \
136 Thermostats/Berendsen.hpp \
137 Thermostats/GaussianThermostat.hpp \
138 Thermostats/Langevin.hpp \
139 Thermostats/NoseHoover.hpp \
140 Thermostats/NoThermostat.hpp \
141 Thermostats/Thermostat.hpp \
142 Thermostats/ThermoStatContainer.hpp \
143 Thermostats/Woodcock.hpp
144
145TESSELATIONSOURCE = \
146 Tesselation/ApproximateShapeArea.cpp \
147 Tesselation/ApproximateShapeVolume.cpp \
148 Tesselation/boundary.cpp \
149 Tesselation/BoundaryLineSet.cpp \
150 Tesselation/BoundaryPointSet.cpp \
151 Tesselation/BoundaryPolygonSet.cpp \
152 Tesselation/BoundaryTriangleSet.cpp \
153 Tesselation/CandidateForTesselation.cpp \
154 Tesselation/ellipsoid.cpp \
155 Tesselation/tesselation.cpp \
156 Tesselation/tesselationhelpers.cpp \
157 Tesselation/triangleintersectionlist.cpp
158
159TESSELATIONHEADER = \
160 Tesselation/ApproximateShapeArea.hpp \
161 Tesselation/ApproximateShapeVolume.hpp \
162 Tesselation/boundary.hpp \
163 Tesselation/BoundaryLineSet.hpp \
164 Tesselation/BoundaryMaps.hpp \
165 Tesselation/BoundaryPointSet.hpp \
166 Tesselation/BoundaryPolygonSet.hpp \
167 Tesselation/BoundaryTriangleSet.hpp \
168 Tesselation/CandidateForTesselation.hpp \
169 Tesselation/ellipsoid.hpp \
170 Tesselation/tesselation.hpp \
171 Tesselation/tesselationhelpers.hpp \
172 Tesselation/triangleintersectionlist.hpp
173
174MOLECUILDERSOURCE = \
175 ${BONDSOURCE} \
176 ${DESCRIPTORSOURCE} \
177 ${DYNAMICSSOURCE} \
178 ${THERMOSTATSOURCE} \
179 ${TESSELATIONSOURCE} \
180 AtomIdSet.cpp \
181 Box.cpp \
182 Box_BoundaryConditions.cpp \
183 config.cpp \
184 Formula.cpp \
185 MoleculeLeafClass.cpp \
186 moleculelist.cpp \
187 molecule.cpp \
188 molecule_geometry.cpp \
189 molecule_graph.cpp \
190 UIElements/UIFactory.cpp \
191 version.c \
192 World.cpp \
193 WorldTime.cpp
194
195MOLECUILDERHEADER = \
196 ${BONDHEADER} \
197 ${DESCRIPTORHEADER} \
198 ${DESCRIPTORIMPLHEADER} \
199 ${DYNAMICSHEADER} \
200 ${THERMOSTATHEADER} \
201 ${TESSELATIONHEADER} \
202 AtomIdSet.hpp \
203 Box.hpp \
204 Box_BoundaryConditions.hpp \
205 config.hpp \
206 Formula.hpp \
207 IdPool.hpp \
208 IdPool_impl.hpp \
209 IdPool_policy.hpp \
210 MoleculeLeafClass.hpp \
211 MoleculeListClass.hpp \
212 molecule.hpp \
213 types.hpp \
214 UIElements/UIFactory.hpp \
215 version.h \
216 World.hpp \
217 World_calculations.hpp \
218 WorldTime.hpp
219
220noinst_LTLIBRARIES += libMolecuilder.la
221libMolecuilder_la_includedir = $(includedir)/MoleCuilder/
222
223nobase_libMolecuilder_la_include_HEADERS = ${MOLECUILDERHEADER}
224
225## Define the source file list for the "libexample-@MOLECUILDER_API_VERSION@.la"
226## target. Note that @MOLECUILDER_API_VERSION@ is not interpreted by Automake and
227## will therefore be treated as if it were literally part of the target name,
228## and the variable name derived from that.
229## The file extension .cc is recognized by Automake, and makes it produce
230## rules which invoke the C++ compiler to produce a libtool object file (.lo)
231## from each source file. Note that it is not necessary to list header files
232## which are already listed elsewhere in a _HEADERS variable assignment.
233libMolecuilder_la_SOURCES = ${MOLECUILDERSOURCE}
234
235## Instruct libtool to include ABI version information in the generated shared
236## library file (.so). The library ABI version is defined in configure.ac, so
237## that all version information is kept in one place.
238#libMolecuilder_la_LDFLAGS = -version-info $(MOLECUILDER_SO_VERSION)
239
240## The generated configuration header is installed in its own subdirectory of
241## $(libdir). The reason for this is that the configuration information put
242## into this header file describes the target platform the installed library
243## has been built for. Thus the file must not be installed into a location
244## intended for architecture-independent files, as defined by the Filesystem
245## Hierarchy Standard (FHS).
246## The nodist_ prefix instructs Automake to not generate rules for including
247## the listed files in the distribution on 'make dist'. Files that are listed
248## in _HEADERS variables are normally included in the distribution, but the
249## configuration header file is generated at configure time and should not be
250## shipped with the source tarball.
251libMolecuilder_la_libincludedir = $(libdir)/MoleCuilder/include
252nodist_libMolecuilder_la_libinclude_HEADERS = $(top_builddir)/libmolecuilder_config.h
253
254## Install the generated pkg-config file (.pc) into the expected location for
255## architecture-dependent package configuration information. Occasionally,
256## pkg-config files are also used for architecture-independent data packages,
257## in which case the correct install location would be $(datadir)/pkgconfig.
258pkgconfigdir = $(libdir)/pkgconfig
259pkgconfig_DATA = $(top_builddir)/MoleCuilder.pc
260
261
262INCLUDES = \
263 -I$(top_srcdir)/src/unittests \
264 -I$(top_srcdir)/src/Actions \
265 -I$(top_srcdir)/src/UIElements \
266 -I$(top_srcdir)/LinearAlgebra/src
267
268bin_PROGRAMS += molecuilder joiner analyzer
269EXTRA_PROGRAMS = unity
270
271
272extrastuffdir = $(datadir)/@PACKAGE@/data
273databasedir = $(extrastuffdir)/databases
274database_DATA = \
275 ${top_srcdir}/data/databases/*.db
276
277bondtabledir = $(extrastuffdir)/bondtables
278bondtable_DATA = \
279 ${top_srcdir}/data/bondtables/*.dat
280
281moleculedir = $(extrastuffdir)/molecules
282molecule_DATA = \
283 ${top_srcdir}/data/molecules/*.pdb
284
285if CONDPYTHON
286pyexec_LTLIBRARIES += pyMoleCuilder.la
287pyMoleCuilder_la_SOURCES = \
288 cleanUp.cpp \
289 cleanUp.hpp \
290 Actions/Action_impl_python.hpp \
291 Actions/GlobalListOfActions.hpp \
292 Actions/ActionHistory.hpp \
293 Actions/pyMoleCuilder.cpp
294pyMoleCuilder_la_CPPFLAGS = ${BOOST_CPPFLAGS} ${CodePatterns_CFLAGS} -I$(PYTHON_INCLUDE_DIR)
295pyMoleCuilder_la_LDFLAGS = -module -avoid-version -shared $(BOOST_PYTHON_LDFLAGS)
296pyMoleCuilder_la_LIBADD = \
297 libMolecuilderUI.la
298if CONDJOBMARKET
299pyMoleCuilder_la_LIBADD += \
300 libMolecuilderJobs.la
301endif
302pyMoleCuilder_la_LIBADD += \
303 $(BOOST_PYTHON_LIBS) \
304 ${CodePatterns_LIBS} \
305 -l$(PYTHON_LIB)
306endif
307
308
309molecuilder_CPPFLAGS = $(AM_CPPFLAGS)
310#molecuilder_CPPFLAGS += -DNO_CACHING
311molecuilder_LDFLAGS = \
312 $(AM_LDFLAGS) \
313 $(BOOST_FILESYSTEM_LDFLAGS) \
314 $(BOOST_PROGRAM_OPTIONS_LDFLAGS) \
315 $(BOOST_RANDOM_LDFLAGS) \
316 $(BOOST_SYSTEM_LDFLAGS) \
317 $(BOOST_THREAD_LDFLAGS)
318molecuilder_SOURCES = \
319 builder.cpp \
320 builder_init.cpp \
321 builder_init.hpp \
322 cleanUp.cpp \
323 cleanUp.hpp \
324 PythonScripting.hpp
325molecuilder_LDADD = \
326 libMolecuilderUI.la
327if CONDJOBMARKET
328molecuilder_LDADD += \
329 libMolecuilderJobs.la
330endif
331molecuilder_LDADD += \
332 $(top_builddir)/LinearAlgebra/src/LinearAlgebra/libLinearAlgebra.la \
333 ${CodePatterns_LIBS} \
334 $(BOOST_THREAD_LIBS) \
335 $(BOOST_PROGRAM_OPTIONS_LIBS) \
336 $(BOOST_RANDOM_LIBS) \
337 $(BOOST_FILESYSTEM_LIBS) \
338 $(BOOST_SYSTEM_LIBS)
339
340if CONDPYTHON
341molecuilder_SOURCES += \
342 Actions/Action_impl_python.hpp \
343 Actions/GlobalListOfActions.hpp
344molecuilder_CPPFLAGS += -I$(PYTHON_INCLUDE_DIR)
345molecuilder_LDFLAGS += $(BOOST_PYTHON_LDFLAGS)
346molecuilder_LDADD += \
347 $(BOOST_PYTHON_LIBS) \
348 ${CodePatterns_LIBS} \
349 -l$(PYTHON_LIB)
350endif
351
352#Stuff for building the GUI using Qt
353if CONDQTGUI
354bin_PROGRAMS += molecuildergui
355molecuildergui_SOURCES = \
356 builder.cpp \
357 builder_init.cpp \
358 builder_init.hpp \
359 cleanUp.cpp \
360 cleanUp.hpp \
361 PythonScripting.hpp
362molecuildergui_CPPFLAGS = $(AM_CPPFLAGS) -DUSE_GUI_QT
363molecuildergui_LDFLAGS = \
364 $(AM_LDFLAGS) \
365 $(BOOST_FILESYSTEM_LDFLAGS) \
366 $(BOOST_PROGRAM_OPTIONS_LDFLAGS) \
367 $(BOOST_SYSTEM_LDFLAGS) \
368 $(BOOST_THREAD_LDFLAGS)
369molecuildergui_LDADD = \
370 libMolecuilderQtUI.la \
371 libMolecuilderUI.la
372if CONDJOBMARKET
373molecuildergui_LDADD += \
374 libMolecuilderJobs.la
375endif
376molecuildergui_LDADD += \
377 $(top_builddir)/LinearAlgebra/src/LinearAlgebra/libLinearAlgebra.la \
378 ${CodePatterns_LIBS} \
379 $(BOOST_THREAD_LIBS) \
380 $(BOOST_PROGRAM_OPTIONS_LIBS) \
381 $(BOOST_RANDOM_LIBS) \
382 $(BOOST_FILESYSTEM_LIBS) \
383 $(BOOST_SYSTEM_LIBS) \
384 $(GUI_LIBS)
385
386if CONDPYTHON
387molecuildergui_SOURCES += \
388 Actions/Action_impl_python.hpp \
389 Actions/GlobalListOfActions.hpp
390molecuildergui_CPPFLAGS += -I$(PYTHON_INCLUDE_DIR)
391molecuildergui_LDFLAGS += $(BOOST_PYTHON_LDFLAGS)
392molecuildergui_LDADD += \
393 $(BOOST_PYTHON_LIBS) \
394 ${CodePatterns_LIBS} \
395 -l$(PYTHON_LIB)
396endif
397
398endif
399
400joiner_SOURCES = Fragmentation/joiner.cpp Fragmentation/datacreator.cpp Fragmentation/datacreator.hpp
401joiner_CPPFLAGS = $(AM_CPPFLAGS)
402joiner_LDFLAGS = $(AM_LDFLAGS) $(BOOST_THREAD_LDFLAGS)
403joiner_LDADD = \
404 libMolecuilderFragmentation_getFromKeysetStub.la \
405 libMolecuilderFragmentation.la \
406 libMolecuilderHelpers.la \
407 libMolecuilderElement.la \
408 $(top_builddir)/LinearAlgebra/src/LinearAlgebra/libLinearAlgebra.la \
409 ${CodePatterns_LIBS} \
410 $(BOOST_THREAD_LIBS)
411
412analyzer_SOURCES = Fragmentation/analyzer.cpp Fragmentation/datacreator.cpp Fragmentation/datacreator.hpp
413analyzer_CPPFLAGS = $(AM_CPPFLAGS)
414analyzer_LDFLAGS = $(AM_LDFLAGS) $(BOOST_THREAD_LDFLAGS)
415analyzer_LDADD = \
416 libMolecuilderFragmentation_getFromKeysetStub.la \
417 libMolecuilderFragmentation.la \
418 libMolecuilderHelpers.la \
419 libMolecuilderElement.la \
420 $(top_builddir)/LinearAlgebra/src/LinearAlgebra/libLinearAlgebra.la \
421 ${CodePatterns_LIBS} \
422 $(BOOST_THREAD_LIBS)
423
424if CONDJOBMARKET
425CONTROLLERSOURCE = \
426 controller_MPQCCommandJob.cpp \
427 ControllerOptions_MPQCCommandJob.cpp
428
429CONTROLLERHEADER = \
430 controller_MPQCCommandJob.hpp \
431 ControllerOptions_MPQCCommandJob.hpp
432
433
434noinst_LTLIBRARIES += libFragmentationAutomationController.la
435libFragmentationAutomationController_la_includedir = $(includedir)/MoleCuilder/JobMarket
436nobase_libFragmentationAutomationController_la_include_HEADERS = $(CONTROLLERHEADER)
437libFragmentationAutomationController_la_SOURCES = $(CONTROLLERSOURCE)
438 libFragmentationAutomationController_la_CPPFLAGS = $(AM_CPPFLAGS) $(JobMarket_CFLAGS)
439libFragmentationAutomationController_la_LIBADD = \
440 ${JobMarket_Controller_LIBS} \
441 $(JobMarket_LIBS)
442
443bin_PROGRAMS += Controller PoolWorker Server
444
445Controller_SOURCES = controller.cpp controller_AddOn_MPQCCommandJob.cpp
446Controller_LDFLAGS = $(AM_LDFLAGS) $(BOOST_SERIALIZATION_LDFLAGS) $(BOOST_PROGRAM_OPTIONS_LDFLAGS) ${CodePatterns_LDFLAGS}
447Controller_CPPFLAGS = $(AM_CPPFLAGS) $(JobMarket_CFLAGS)
448Controller_LDADD = \
449 libFragmentationAutomationController.la \
450 libMolecuilderJobs.la \
451 libMolecuilderFragmentation_getFromKeysetStub.la \
452 libMolecuilderFragmentation.la \
453 libMolecuilderHelpers.la \
454 $(JobMarket_Controller_LIBS) \
455 $(top_builddir)/LinearAlgebra/src/LinearAlgebra/libLinearAlgebra.la \
456 $(BOOST_SERIALIZATION_LIBS) \
457 $(BOOST_PROGRAM_OPTIONS_LIBS) \
458 ${CodePatterns_LIBS}
459
460PoolWorker_SOURCES = poolworker.cpp
461PoolWorker_LDFLAGS = $(AM_LDFLAGS) $(BOOST_SERIALIZATION_LDFLAGS) $(BOOST_PROGRAM_OPTIONS_LDFLAGS) ${CodePatterns_LDFLAGS}
462PoolWorker_CPPFLAGS = $(AM_CPPFLAGS) $(JobMarket_CFLAGS)
463PoolWorker_LDADD = \
464 libMolecuilderJobs.la \
465 ${JobMarket_PoolWorker_LIBS} \
466 $(top_builddir)/LinearAlgebra/src/LinearAlgebra/libLinearAlgebra.la \
467 $(BOOST_SERIALIZATION_LIBS) \
468 $(BOOST_PROGRAM_OPTIONS_LIBS) \
469 ${CodePatterns_LIBS}
470
471Server_SOURCES = Server.cpp
472Server_LDFLAGS = $(AM_LDFLAGS) $(BOOST_SERIALIZATION_LDFLAGS) $(BOOST_PROGRAM_OPTIONS_LDFLAGS) ${CodePatterns_LDFLAGS}
473Server_CPPFLAGS = $(AM_CPPFLAGS) $(JobMarket_CFLAGS)
474Server_LDADD = \
475 libMolecuilderJobs.la \
476 ${JobMarket_Server_LIBS} \
477 $(top_builddir)/LinearAlgebra/src/LinearAlgebra/libLinearAlgebra.la \
478 $(BOOST_SERIALIZATION_LIBS) \
479 $(BOOST_PROGRAM_OPTIONS_LIBS) \
480 ${CodePatterns_LIBS}
481endif
482
483if CONDLEVMAR
484bin_PROGRAMS += LevMartester
485LevMartester_SOURCES = LevMartester.cpp
486LevMartester_CPPFLAGS = $(AM_CPPFLAGS) $(LEVMAR_CPPFLAGS)
487LevMartester_LDFLAGS = $(AM_LDFLAGS) $(BOOST_SERIALIZATION_LDFLAGS) $(BOOST_PROGRAM_OPTIONS_LDFLAGS) $(BOOST_FILESYSTEM_LDFLAGS) $(BOOST_SYSTEM_LDFLAGS) ${CodePatterns_LDFLAGS} $(LEVMAR_LDFLAGS)
488LevMartester_LDADD = \
489 libMolecuilderPotentials.la \
490 libMolecuilderFunctionApproximation.la \
491 libMolecuilderFragmentation.la \
492 libMolecuilderFragmentation_getFromKeysetStub.la \
493 libMolecuilderFragmentationSetValues.la \
494 libMolecuilderHelpers.la \
495 $(top_builddir)/LinearAlgebra/src/LinearAlgebra/libLinearAlgebra.la \
496 $(BOOST_SERIALIZATION_LIBS) \
497 $(BOOST_PROGRAM_OPTIONS_LIBS) \
498 $(BOOST_FILESYSTEM_LIBS) \
499 $(BOOST_SYSTEM_LIBS) \
500 ${CodePatterns_LIBS} \
501 $(LEVMAR_LIBS) \
502 $(LAPACK_LIBS) $(BLAS_LIBS) $(LIBS) $(FLIBS)
503endif
504
505unity_SOURCES = unity.cpp
506unity_CPPFLAGS = $(AM_CPPFLAGS)
507unity_LDFLAGS = $(AM_LDFLAGS) $(BOOST_FILESYSTEM_LDFLAGS) $(BOOST_PROGRAM_OPTIONS_LDFLAGS) $(BOOST_RANDOM_LDFLAGS) $(BOOST_SYSTEM_LDFLAGS) $(BOOST_THREAD_LDFLAGS)
508unity_LDADD = \
509 ${CodePatterns_LIBS} \
510 $(BOOST_THREAD_LIBS) \
511 $(BOOST_PROGRAM_OPTIONS_LIBS) \
512 $(BOOST_RANDOM_LIBS) \
513 $(BOOST_FILESYSTEM_LIBS) \
514 $(BOOST_SYSTEM_LIBS)
515
516
517FORCE:
518$(srcdir)/.git-version: FORCE
519 @if (test -d $(top_srcdir)/.git && cd $(srcdir) \
520 && { git describe --dirty --always || git describe; } ) > .git-version-t 2>/dev/null \
521 && ! diff .git-version-t $(srcdir)/.git-version >/dev/null 2>&1; then \
522 mv -f .git-version-t $(srcdir)/.git-version; \
523 else \
524 rm -f .git-version-t; \
525 fi
526
527EXTRA_DIST += \
528 $(srcdir)/.git-version \
529 $(bondtable_DATA) \
530 $(database_DATA) \
531 $(molecule_DATA)
532
533$(srcdir)/version.c: $(srcdir)/.git-version
534 echo "const char *MOLECUILDERVERSION = \"$(PACKAGE_NAME) version "`cat $(srcdir)/.git-version`"\";" > $@
535
536
537unity.cpp: ${MOLECUILDERSOURCE} ${MOLECUILDERHEADER}
538 list='$(MOLECUILDERSOURCE)'; for file in $$list; do \
539 echo "#include \"$(srcdir)/$$file\"" >> unity.cpp; \
540 done; \
541 subdirs='$(SUBDIRS)';for directory in $$subdirs; do\
542 olddir=$$PWD;\
543 cd $$directory && make unity.cpp;\
544 cd $$olddir;\
545 echo "#include \"$$directory/unity.cpp\"" >> unity.cpp;\
546 done;\
547 echo "#include \"$(srcdir)/builder.cpp\"" >> unity.cpp;
548 echo "#include \"$(srcdir)/version.c\"" >> unity.cpp;
549
550MOSTLYCLEANFILES += unity.cpp
551
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