[efc3cb] | 1 | # PLEASE adhere to the alphabetical ordering in this Makefile!
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| 2 | # Also indentation by a single tab
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| 3 |
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[455573] | 4 | MOSTLYCLEANFILES =
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| 5 | lib_LTLIBRARIES =
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| 6 | noinst_LTLIBRARIES =
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[2d31e1] | 7 | pyexec_LTLIBRARIES =
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[aee2da] | 8 | BUILT_SOURCES =
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[bd8788] | 9 | bin_PROGRAMS =
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[fd4d5e] | 10 | EXTRA_DIST =
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[455573] | 11 |
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| 12 | include Actions/Makefile.am
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[9b5a2c] | 13 | include Analysis/Makefile.am
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[6f0841] | 14 | include Atom/Makefile.am
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[3bdb6d] | 15 | include Element/Makefile.am
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[0d57cbe] | 16 | include Filling/Makefile.am
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[d9a032] | 17 | include Fragmentation/Makefile.am
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[fbf143] | 18 | include Fragmentation/Summation/Containers/Makefile.am
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| 19 | include Fragmentation/Summation/Converter/Makefile.am
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[e920061] | 20 | include Fragmentation/Summation/Makefile.am
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[fbf143] | 21 | include Fragmentation/Summation/SetValues/Makefile.am
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[66cfc7] | 22 | include FunctionApproximation/Makefile.am
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[455573] | 23 | include Graph/Makefile.am
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[2fadb6f] | 24 | include Helpers/Makefile.am
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[004d5c] | 25 |
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| 26 | if CONDJOBMARKET
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[ffe057] | 27 | include Fragmentation/Automation/Makefile.am
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[cc5db5] | 28 | include Jobs/Makefile.am
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[004d5c] | 29 | endif
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| 30 |
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[91f592] | 31 | include LinkedCell/Makefile.am
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[8453b3] | 32 | include Parameters/Makefile.am
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[455573] | 33 | include Parser/Makefile.am
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[6bb72a] | 34 | include Potentials/Makefile.am
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[455573] | 35 | include RandomNumbers/Makefile.am
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| 36 | include Shapes/Makefile.am
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| 37 | include UIElements/Makefile.am
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[5079a0] | 38 |
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[a10cc0] | 39 | AM_LDFLAGS = -ldl ${BOOST_LDFLAGS} ${CodePatterns_LDFLAGS}
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[a0064e] | 40 | AM_CPPFLAGS = ${BOOST_CPPFLAGS} ${CodePatterns_CFLAGS}
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[d5240d] | 41 |
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[129204] | 42 | BONDSOURCE = \
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| 43 | Bond/bond.cpp \
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[3f7587] | 44 | Bond/bond_observable.cpp \
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[af9be32] | 45 | Bond/BondInfo.cpp \
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[129204] | 46 | Bond/GraphEdge.cpp
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| 47 |
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| 48 | BONDHEADER = \
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| 49 | Bond/bond.hpp \
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[3f7587] | 50 | Bond/bond_observable.hpp \
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[af9be32] | 51 | Bond/BondInfo.hpp \
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[129204] | 52 | Bond/GraphEdge.hpp
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[efc3cb] | 53 |
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[c42e60] | 54 | DESCRIPTORSOURCE = \
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| 55 | Descriptors/AtomDescriptor.cpp \
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[efc3cb] | 56 | Descriptors/AtomIdDescriptor.cpp \
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[b49568] | 57 | Descriptors/AtomOfMoleculeDescriptor.cpp \
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[c42e60] | 58 | Descriptors/AtomOfMoleculeSelectionDescriptor.cpp \
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[61c364] | 59 | Descriptors/AtomOrderDescriptor.cpp \
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[48dcbd] | 60 | Descriptors/AtomSelectionDescriptor.cpp \
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[6d858c] | 61 | Descriptors/AtomShapeDescriptor.cpp \
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[efc3cb] | 62 | Descriptors/AtomTypeDescriptor.cpp \
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[7afb77] | 63 | Descriptors/AtomsWithinDistanceOfDescriptor.cpp \
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[efc3cb] | 64 | Descriptors/MoleculeDescriptor.cpp \
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[6e7147] | 65 | Descriptors/MoleculeFormulaDescriptor.cpp \
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[e05826] | 66 | Descriptors/MoleculeIdDescriptor.cpp \
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[e6317b] | 67 | Descriptors/MoleculeNameDescriptor.cpp \
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[c42e60] | 68 | Descriptors/MoleculeOfAtomSelectionDescriptor.cpp \
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[92d756] | 69 | Descriptors/MoleculeOrderDescriptor.cpp \
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[cf0ca1] | 70 | Descriptors/MoleculePtrDescriptor.cpp \
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| 71 | Descriptors/MoleculeSelectionDescriptor.cpp
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[57adc7] | 72 |
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[75ac0c] | 73 |
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[c42e60] | 74 | DESCRIPTORHEADER = \
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| 75 | Descriptors/AtomDescriptor.hpp \
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[efc3cb] | 76 | Descriptors/AtomIdDescriptor.hpp \
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[b49568] | 77 | Descriptors/AtomOfMoleculeDescriptor.hpp \
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[c42e60] | 78 | Descriptors/AtomOfMoleculeSelectionDescriptor.hpp \
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[61c364] | 79 | Descriptors/AtomOrderDescriptor.hpp \
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[48dcbd] | 80 | Descriptors/AtomSelectionDescriptor.hpp \
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[6d858c] | 81 | Descriptors/AtomShapeDescriptor.hpp \
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[efc3cb] | 82 | Descriptors/AtomTypeDescriptor.hpp \
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[7afb77] | 83 | Descriptors/AtomsWithinDistanceOfDescriptor.hpp \
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[36f507] | 84 | Descriptors/DescriptorBase.hpp \
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[efc3cb] | 85 | Descriptors/MoleculeDescriptor.hpp \
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[6e7147] | 86 | Descriptors/MoleculeFormulaDescriptor.hpp \
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[e30ce8] | 87 | Descriptors/MoleculeIdDescriptor.hpp \
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[31b09e] | 88 | Descriptors/MoleculeNameDescriptor.hpp \
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[c42e60] | 89 | Descriptors/MoleculeOfAtomSelectionDescriptor.hpp \
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[92d756] | 90 | Descriptors/MoleculeOrderDescriptor.hpp \
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[cf0ca1] | 91 | Descriptors/MoleculePtrDescriptor.hpp \
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[36f507] | 92 | Descriptors/MoleculeSelectionDescriptor.hpp \
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[feb5d0] | 93 | Descriptors/SelectiveConstIterator.hpp \
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[36f507] | 94 | Descriptors/SelectiveIterator.hpp
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[c42e60] | 95 |
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| 96 | DESCRIPTORIMPLHEADER = \
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| 97 | Descriptors/AtomDescriptor_impl.hpp \
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| 98 | Descriptors/AtomIdDescriptor_impl.hpp \
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[b49568] | 99 | Descriptors/AtomOfMoleculeDescriptor_impl.hpp \
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[c42e60] | 100 | Descriptors/AtomOfMoleculeSelectionDescriptor_impl.hpp \
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[61c364] | 101 | Descriptors/AtomOrderDescriptor_impl.hpp \
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[c42e60] | 102 | Descriptors/AtomSelectionDescriptor_impl.hpp \
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| 103 | Descriptors/AtomShapeDescriptor_impl.hpp \
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| 104 | Descriptors/AtomTypeDescriptor_impl.hpp \
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[7afb77] | 105 | Descriptors/AtomsWithinDistanceOfDescriptor_impl.hpp \
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[36f507] | 106 | Descriptors/DescriptorBase_impl.hpp \
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[c42e60] | 107 | Descriptors/MoleculeDescriptor_impl.hpp \
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| 108 | Descriptors/MoleculeFormulaDescriptor_impl.hpp \
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| 109 | Descriptors/MoleculeIdDescriptor_impl.hpp \
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| 110 | Descriptors/MoleculeNameDescriptor_impl.hpp \
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| 111 | Descriptors/MoleculeOfAtomSelectionDescriptor_impl.hpp \
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| 112 | Descriptors/MoleculeOrderDescriptor_impl.hpp \
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| 113 | Descriptors/MoleculePtrDescriptor_impl.hpp \
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[36f507] | 114 | Descriptors/MoleculeSelectionDescriptor_impl.hpp \
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[feb5d0] | 115 | Descriptors/SelectiveConstIterator_impl.hpp \
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[36f507] | 116 | Descriptors/SelectiveIterator_impl.hpp
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[3f9eba] | 117 |
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[9e23a3] | 118 | DYNAMICSSOURCE = \
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| 119 | Dynamics/MinimiseConstrainedPotential.cpp
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| 120 |
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| 121 | DYNAMICSHEADER = \
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[20943b] | 122 | Dynamics/LinearInterpolationBetweenSteps.hpp \
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[8009ce] | 123 | Dynamics/MinimiseConstrainedPotential.hpp \
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[435065] | 124 | Dynamics/OutputTemperature.hpp \
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| 125 | Dynamics/VerletForceIntegration.hpp
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[9e23a3] | 126 |
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[194649] | 127 | THERMOSTATSOURCE = \
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| 128 | Thermostats/Berendsen.cpp \
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| 129 | Thermostats/GaussianThermostat.cpp \
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| 130 | Thermostats/Langevin.cpp \
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| 131 | Thermostats/NoseHoover.cpp \
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| 132 | Thermostats/NoThermostat.cpp \
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| 133 | Thermostats/Thermostat.cpp \
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[ab26c3] | 134 | Thermostats/ThermoStatContainer.cpp \
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[194649] | 135 | Thermostats/Woodcock.cpp
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[d193a2] | 136 |
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[194649] | 137 | THERMOSTATHEADER = \
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| 138 | Thermostats/Berendsen.hpp \
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| 139 | Thermostats/GaussianThermostat.hpp \
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| 140 | Thermostats/Langevin.hpp \
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| 141 | Thermostats/NoseHoover.hpp \
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| 142 | Thermostats/NoThermostat.hpp \
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| 143 | Thermostats/Thermostat.hpp \
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[262ecc] | 144 | Thermostats/ThermoStatContainer.hpp \
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[194649] | 145 | Thermostats/Woodcock.hpp
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[d193a2] | 146 |
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[d74077] | 147 | TESSELATIONSOURCE = \
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[4c6e70] | 148 | Tesselation/ApproximateShapeArea.cpp \
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| 149 | Tesselation/ApproximateShapeVolume.cpp \
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[d127c8] | 150 | Tesselation/boundary.cpp \
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| 151 | Tesselation/BoundaryLineSet.cpp \
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| 152 | Tesselation/BoundaryPointSet.cpp \
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| 153 | Tesselation/BoundaryPolygonSet.cpp \
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| 154 | Tesselation/BoundaryTriangleSet.cpp \
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| 155 | Tesselation/CandidateForTesselation.cpp \
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| 156 | Tesselation/ellipsoid.cpp \
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| 157 | Tesselation/tesselation.cpp \
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| 158 | Tesselation/tesselationhelpers.cpp \
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| 159 | Tesselation/triangleintersectionlist.cpp
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[d74077] | 160 |
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| 161 | TESSELATIONHEADER = \
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[4c6e70] | 162 | Tesselation/ApproximateShapeArea.hpp \
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| 163 | Tesselation/ApproximateShapeVolume.hpp \
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[d127c8] | 164 | Tesselation/boundary.hpp \
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| 165 | Tesselation/BoundaryLineSet.hpp \
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| 166 | Tesselation/BoundaryMaps.hpp \
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| 167 | Tesselation/BoundaryPointSet.hpp \
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| 168 | Tesselation/BoundaryPolygonSet.hpp \
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| 169 | Tesselation/BoundaryTriangleSet.hpp \
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| 170 | Tesselation/CandidateForTesselation.hpp \
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| 171 | Tesselation/ellipsoid.hpp \
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| 172 | Tesselation/tesselation.hpp \
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| 173 | Tesselation/tesselationhelpers.hpp \
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| 174 | Tesselation/triangleintersectionlist.hpp
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[d74077] | 175 |
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[255971] | 176 | MOLECUILDERSOURCE = \
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[129204] | 177 | ${BONDSOURCE} \
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[efc3cb] | 178 | ${DESCRIPTORSOURCE} \
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[9e23a3] | 179 | ${DYNAMICSSOURCE} \
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[194649] | 180 | ${THERMOSTATSOURCE} \
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[d74077] | 181 | ${TESSELATIONSOURCE} \
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[5e6534] | 182 | AtomIdSet.cpp \
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[83c09a] | 183 | Box.cpp \
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[dd067a] | 184 | Box_BoundaryConditions.cpp \
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[efc3cb] | 185 | config.cpp \
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[6f43ab] | 186 | Formula.cpp \
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[d3abb1] | 187 | MoleculeLeafClass.cpp \
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[efc3cb] | 188 | moleculelist.cpp \
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| 189 | molecule.cpp \
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| 190 | molecule_geometry.cpp \
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| 191 | molecule_graph.cpp \
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[112f90] | 192 | UIElements/UIFactory.cpp \
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[9cd9ab] | 193 | version.c \
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[f649de] | 194 | World.cpp \
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| 195 | WorldTime.cpp
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[5f612ee] | 196 |
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[255971] | 197 | MOLECUILDERHEADER = \
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[129204] | 198 | ${BONDHEADER} \
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[efc3cb] | 199 | ${DESCRIPTORHEADER} \
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[c42e60] | 200 | ${DESCRIPTORIMPLHEADER} \
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[9e23a3] | 201 | ${DYNAMICSHEADER} \
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[194649] | 202 | ${THERMOSTATHEADER} \
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[d74077] | 203 | ${TESSELATIONHEADER} \
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[5e6534] | 204 | AtomIdSet.hpp \
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[83c09a] | 205 | Box.hpp \
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[dd067a] | 206 | Box_BoundaryConditions.hpp \
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[efc3cb] | 207 | config.hpp \
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[6f43ab] | 208 | Formula.hpp \
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[3e4fb6] | 209 | IdPool.hpp \
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| 210 | IdPool_impl.hpp \
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[a292f6] | 211 | IdPool_policy.hpp \
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[d3abb1] | 212 | MoleculeLeafClass.hpp \
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[262ecc] | 213 | MoleculeListClass.hpp \
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[efc3cb] | 214 | molecule.hpp \
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[36f507] | 215 | types.hpp \
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[112f90] | 216 | UIElements/UIFactory.hpp \
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[9cd9ab] | 217 | version.h \
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[6bb605] | 218 | World.hpp \
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[8544a33] | 219 | World_calculations.hpp \
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[f649de] | 220 | WorldTime.hpp
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[3027f8] | 221 |
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[455573] | 222 | noinst_LTLIBRARIES += libMolecuilder.la
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[e5bf2b] | 223 | libMolecuilder_la_includedir = $(includedir)/MoleCuilder/
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[255971] | 224 |
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[e5bf2b] | 225 | nobase_libMolecuilder_la_include_HEADERS = ${MOLECUILDERHEADER}
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[255971] | 226 |
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| 227 | ## Define the source file list for the "libexample-@MOLECUILDER_API_VERSION@.la"
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| 228 | ## target. Note that @MOLECUILDER_API_VERSION@ is not interpreted by Automake and
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| 229 | ## will therefore be treated as if it were literally part of the target name,
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| 230 | ## and the variable name derived from that.
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| 231 | ## The file extension .cc is recognized by Automake, and makes it produce
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| 232 | ## rules which invoke the C++ compiler to produce a libtool object file (.lo)
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| 233 | ## from each source file. Note that it is not necessary to list header files
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| 234 | ## which are already listed elsewhere in a _HEADERS variable assignment.
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[9cd9ab] | 235 | libMolecuilder_la_SOURCES = ${MOLECUILDERSOURCE}
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[255971] | 236 |
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| 237 | ## Instruct libtool to include ABI version information in the generated shared
|
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| 238 | ## library file (.so). The library ABI version is defined in configure.ac, so
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| 239 | ## that all version information is kept in one place.
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[455573] | 240 | #libMolecuilder_la_LDFLAGS = -version-info $(MOLECUILDER_SO_VERSION)
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[255971] | 241 |
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| 242 | ## The generated configuration header is installed in its own subdirectory of
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| 243 | ## $(libdir). The reason for this is that the configuration information put
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| 244 | ## into this header file describes the target platform the installed library
|
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| 245 | ## has been built for. Thus the file must not be installed into a location
|
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| 246 | ## intended for architecture-independent files, as defined by the Filesystem
|
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| 247 | ## Hierarchy Standard (FHS).
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| 248 | ## The nodist_ prefix instructs Automake to not generate rules for including
|
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| 249 | ## the listed files in the distribution on 'make dist'. Files that are listed
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| 250 | ## in _HEADERS variables are normally included in the distribution, but the
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| 251 | ## configuration header file is generated at configure time and should not be
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| 252 | ## shipped with the source tarball.
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[e5bf2b] | 253 | libMolecuilder_la_libincludedir = $(libdir)/MoleCuilder/include
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| 254 | nodist_libMolecuilder_la_libinclude_HEADERS = $(top_builddir)/libmolecuilder_config.h
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[255971] | 255 |
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| 256 | ## Install the generated pkg-config file (.pc) into the expected location for
|
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| 257 | ## architecture-dependent package configuration information. Occasionally,
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| 258 | ## pkg-config files are also used for architecture-independent data packages,
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| 259 | ## in which case the correct install location would be $(datadir)/pkgconfig.
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| 260 | pkgconfigdir = $(libdir)/pkgconfig
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[acbe1b] | 261 | pkgconfig_DATA = $(top_builddir)/MoleCuilder.pc
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[255971] | 262 |
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[ef9df36] | 263 |
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[a10cc0] | 264 | INCLUDES = \
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| 265 | -I$(top_srcdir)/src/unittests \
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| 266 | -I$(top_srcdir)/src/Actions \
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| 267 | -I$(top_srcdir)/src/UIElements \
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[004d5c] | 268 | -I$(top_srcdir)/LinearAlgebra/src
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[ef9df36] | 269 |
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[004d5c] | 270 | bin_PROGRAMS += molecuilder joiner analyzer
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[796aa6] | 271 | EXTRA_PROGRAMS = unity
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[04488a] | 272 |
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[b1d8092] | 273 |
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[936a02] | 274 | extrastuffdir = $(datadir)/@PACKAGE@/data
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| 275 | databasedir = $(extrastuffdir)/databases
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| 276 | database_DATA = \
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| 277 | ${top_srcdir}/data/databases/*.db
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| 278 |
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| 279 | bondtabledir = $(extrastuffdir)/bondtables
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| 280 | bondtable_DATA = \
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| 281 | ${top_srcdir}/data/bondtables/*.dat
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[b1d8092] | 282 |
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[936a02] | 283 | moleculedir = $(extrastuffdir)/molecules
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| 284 | molecule_DATA = \
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| 285 | ${top_srcdir}/data/molecules/*.pdb
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[b1d8092] | 286 |
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[c015b3] | 287 | if CONDPYTHON
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[693a80] | 288 | pyexec_LTLIBRARIES += pyMoleCuilder.la
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[949953] | 289 | pyMoleCuilder_la_SOURCES = \
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| 290 | cleanUp.cpp \
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| 291 | cleanUp.hpp \
|
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[48d3c0] | 292 | Actions/Action_impl_python.hpp \
|
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| 293 | Actions/GlobalListOfActions.hpp \
|
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| 294 | Actions/ActionHistory.hpp \
|
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[949953] | 295 | Actions/pyMoleCuilder.cpp
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[693a80] | 296 | pyMoleCuilder_la_CPPFLAGS = ${BOOST_CPPFLAGS} ${CodePatterns_CFLAGS} -I$(PYTHON_INCLUDE_DIR)
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[785218] | 297 | pyMoleCuilder_la_LDFLAGS = -module -avoid-version -shared $(BOOST_PYTHON_LDFLAGS)
|
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[693a80] | 298 | pyMoleCuilder_la_LIBADD = \
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[eb0d77] | 299 | libMolecuilderUI.la
|
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| 300 | if CONDJOBMARKET
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| 301 | pyMoleCuilder_la_LIBADD += \
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| 302 | libMolecuilderJobs.la
|
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| 303 | endif
|
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| 304 | pyMoleCuilder_la_LIBADD += \
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[785218] | 305 | $(BOOST_PYTHON_LIBS) \
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[693a80] | 306 | ${CodePatterns_LIBS} \
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| 307 | -l$(PYTHON_LIB)
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[c015b3] | 308 | endif
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[693a80] | 309 |
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[715085] | 310 |
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[14de8e1] | 311 | molecuilder_CPPFLAGS = $(AM_CPPFLAGS)
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| 312 | #molecuilder_CPPFLAGS += -DNO_CACHING
|
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| 313 | molecuilder_LDFLAGS = \
|
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| 314 | $(AM_LDFLAGS) \
|
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| 315 | $(BOOST_FILESYSTEM_LDFLAGS) \
|
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| 316 | $(BOOST_PROGRAM_OPTIONS_LDFLAGS) \
|
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| 317 | $(BOOST_RANDOM_LDFLAGS) \
|
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| 318 | $(BOOST_SYSTEM_LDFLAGS) \
|
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| 319 | $(BOOST_THREAD_LDFLAGS)
|
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[949953] | 320 | molecuilder_SOURCES = \
|
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| 321 | builder.cpp \
|
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| 322 | builder_init.cpp \
|
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| 323 | builder_init.hpp \
|
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| 324 | cleanUp.cpp \
|
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[14de8e1] | 325 | cleanUp.hpp \
|
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| 326 | PythonScripting.hpp
|
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[952f38] | 327 | molecuilder_LDADD = \
|
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[eb0d77] | 328 | libMolecuilderUI.la
|
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| 329 | if CONDJOBMARKET
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| 330 | molecuilder_LDADD += \
|
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| 331 | libMolecuilderJobs.la
|
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| 332 | endif
|
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| 333 | molecuilder_LDADD += \
|
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[bf4b9f] | 334 | $(top_builddir)/LinearAlgebra/src/LinearAlgebra/libLinearAlgebra.la \
|
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[a0064e] | 335 | ${CodePatterns_LIBS} \
|
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[79de12] | 336 | $(BOOST_THREAD_LIBS) \
|
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| 337 | $(BOOST_PROGRAM_OPTIONS_LIBS) \
|
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| 338 | $(BOOST_RANDOM_LIBS) \
|
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[37ce5d] | 339 | $(BOOST_FILESYSTEM_LIBS) \
|
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| 340 | $(BOOST_SYSTEM_LIBS)
|
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[14de8e1] | 341 |
|
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| 342 | if CONDPYTHON
|
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| 343 | molecuilder_SOURCES += \
|
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| 344 | Actions/Action_impl_python.hpp \
|
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| 345 | Actions/GlobalListOfActions.hpp
|
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| 346 | molecuilder_CPPFLAGS += -I$(PYTHON_INCLUDE_DIR)
|
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| 347 | molecuilder_LDFLAGS += $(BOOST_PYTHON_LDFLAGS)
|
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| 348 | molecuilder_LDADD += \
|
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| 349 | $(BOOST_PYTHON_LIBS) \
|
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| 350 | ${CodePatterns_LIBS} \
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| 351 | -l$(PYTHON_LIB)
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| 352 | endif
|
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[b1d8092] | 353 |
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[4cf323d] | 354 | #Stuff for building the GUI using Qt
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[c015b3] | 355 | if CONDQTGUI
|
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| 356 | bin_PROGRAMS += molecuildergui
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[949953] | 357 | molecuildergui_SOURCES = \
|
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| 358 | builder.cpp \
|
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| 359 | builder_init.cpp \
|
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| 360 | builder_init.hpp \
|
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| 361 | cleanUp.cpp \
|
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[14de8e1] | 362 | cleanUp.hpp \
|
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| 363 | PythonScripting.hpp
|
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| 364 | molecuildergui_CPPFLAGS = $(AM_CPPFLAGS) -DUSE_GUI_QT
|
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| 365 | molecuildergui_LDFLAGS = \
|
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| 366 | $(AM_LDFLAGS) \
|
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| 367 | $(BOOST_FILESYSTEM_LDFLAGS) \
|
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| 368 | $(BOOST_PROGRAM_OPTIONS_LDFLAGS) \
|
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| 369 | $(BOOST_SYSTEM_LDFLAGS) \
|
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| 370 | $(BOOST_THREAD_LDFLAGS)
|
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[952f38] | 371 | molecuildergui_LDADD = \
|
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[455573] | 372 | libMolecuilderQtUI.la \
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[eb0d77] | 373 | libMolecuilderUI.la
|
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| 374 | if CONDJOBMARKET
|
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| 375 | molecuildergui_LDADD += \
|
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| 376 | libMolecuilderJobs.la
|
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| 377 | endif
|
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| 378 | molecuildergui_LDADD += \
|
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[bf4b9f] | 379 | $(top_builddir)/LinearAlgebra/src/LinearAlgebra/libLinearAlgebra.la \
|
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[a0064e] | 380 | ${CodePatterns_LIBS} \
|
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[79de12] | 381 | $(BOOST_THREAD_LIBS) \
|
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| 382 | $(BOOST_PROGRAM_OPTIONS_LIBS) \
|
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| 383 | $(BOOST_RANDOM_LIBS) \
|
---|
| 384 | $(BOOST_FILESYSTEM_LIBS) \
|
---|
[37ce5d] | 385 | $(BOOST_SYSTEM_LIBS) \
|
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[455573] | 386 | $(GUI_LIBS)
|
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[14de8e1] | 387 |
|
---|
| 388 | if CONDPYTHON
|
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| 389 | molecuildergui_SOURCES += \
|
---|
| 390 | Actions/Action_impl_python.hpp \
|
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| 391 | Actions/GlobalListOfActions.hpp
|
---|
| 392 | molecuildergui_CPPFLAGS += -I$(PYTHON_INCLUDE_DIR)
|
---|
| 393 | molecuildergui_LDFLAGS += $(BOOST_PYTHON_LDFLAGS)
|
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| 394 | molecuildergui_LDADD += \
|
---|
| 395 | $(BOOST_PYTHON_LIBS) \
|
---|
| 396 | ${CodePatterns_LIBS} \
|
---|
| 397 | -l$(PYTHON_LIB)
|
---|
| 398 | endif
|
---|
| 399 |
|
---|
[c015b3] | 400 | endif
|
---|
[b1d8092] | 401 |
|
---|
[3bdb6d] | 402 | joiner_SOURCES = Fragmentation/joiner.cpp Fragmentation/datacreator.cpp Fragmentation/datacreator.hpp
|
---|
[14de8e1] | 403 | joiner_CPPFLAGS = $(AM_CPPFLAGS)
|
---|
[3b5fca] | 404 | joiner_LDFLAGS = $(AM_LDFLAGS) $(BOOST_THREAD_LDFLAGS)
|
---|
[255971] | 405 | joiner_LDADD = \
|
---|
[fe0355] | 406 | libMolecuilderFragmentation_getFromKeysetStub.la \
|
---|
[a9b86d] | 407 | libMolecuilderFragmentation.la \
|
---|
[fbf143] | 408 | libMolecuilderFragmentation_KeysetsContainer.la \
|
---|
[2fadb6f] | 409 | libMolecuilderHelpers.la \
|
---|
[3bdb6d] | 410 | libMolecuilderElement.la \
|
---|
[bf4b9f] | 411 | $(top_builddir)/LinearAlgebra/src/LinearAlgebra/libLinearAlgebra.la \
|
---|
[a0064e] | 412 | ${CodePatterns_LIBS} \
|
---|
[79de12] | 413 | $(BOOST_THREAD_LIBS)
|
---|
[b1d8092] | 414 |
|
---|
[3bdb6d] | 415 | analyzer_SOURCES = Fragmentation/analyzer.cpp Fragmentation/datacreator.cpp Fragmentation/datacreator.hpp
|
---|
[14de8e1] | 416 | analyzer_CPPFLAGS = $(AM_CPPFLAGS)
|
---|
[3b5fca] | 417 | analyzer_LDFLAGS = $(AM_LDFLAGS) $(BOOST_THREAD_LDFLAGS)
|
---|
[255971] | 418 | analyzer_LDADD = \
|
---|
[fe0355] | 419 | libMolecuilderFragmentation_getFromKeysetStub.la \
|
---|
[a9b86d] | 420 | libMolecuilderFragmentation.la \
|
---|
[fbf143] | 421 | libMolecuilderFragmentation_KeysetsContainer.la \
|
---|
[2fadb6f] | 422 | libMolecuilderHelpers.la \
|
---|
[3bdb6d] | 423 | libMolecuilderElement.la \
|
---|
[bf4b9f] | 424 | $(top_builddir)/LinearAlgebra/src/LinearAlgebra/libLinearAlgebra.la \
|
---|
[a0064e] | 425 | ${CodePatterns_LIBS} \
|
---|
[79de12] | 426 | $(BOOST_THREAD_LIBS)
|
---|
[14de469] | 427 |
|
---|
[004d5c] | 428 | if CONDJOBMARKET
|
---|
[cc5db5] | 429 | CONTROLLERSOURCE = \
|
---|
[fd4d5e] | 430 | controller_MPQCCommandJob.cpp \
|
---|
[7da5cd] | 431 | ControllerOptions_MPQCCommandJob.cpp
|
---|
[cc5db5] | 432 |
|
---|
| 433 | CONTROLLERHEADER = \
|
---|
[fd4d5e] | 434 | controller_MPQCCommandJob.hpp \
|
---|
[7da5cd] | 435 | ControllerOptions_MPQCCommandJob.hpp
|
---|
| 436 |
|
---|
[fd4d5e] | 437 |
|
---|
| 438 | noinst_LTLIBRARIES += libFragmentationAutomationController.la
|
---|
| 439 | libFragmentationAutomationController_la_includedir = $(includedir)/MoleCuilder/JobMarket
|
---|
| 440 | nobase_libFragmentationAutomationController_la_include_HEADERS = $(CONTROLLERHEADER)
|
---|
| 441 | libFragmentationAutomationController_la_SOURCES = $(CONTROLLERSOURCE)
|
---|
[004d5c] | 442 | libFragmentationAutomationController_la_CPPFLAGS = $(AM_CPPFLAGS) $(JobMarket_CFLAGS)
|
---|
[fd4d5e] | 443 | libFragmentationAutomationController_la_LIBADD = \
|
---|
[004d5c] | 444 | ${JobMarket_Controller_LIBS} \
|
---|
| 445 | $(JobMarket_LIBS)
|
---|
[cc5db5] | 446 |
|
---|
[fd4d5e] | 447 | bin_PROGRAMS += Controller PoolWorker Server
|
---|
| 448 |
|
---|
[7da5cd] | 449 | Controller_SOURCES = controller.cpp controller_AddOn_MPQCCommandJob.cpp
|
---|
[4d4ef8] | 450 | Controller_LDFLAGS = $(AM_LDFLAGS) $(BOOST_SERIALIZATION_LDFLAGS) $(BOOST_PROGRAM_OPTIONS_LDFLAGS) ${CodePatterns_LDFLAGS}
|
---|
[14de8e1] | 451 | Controller_CPPFLAGS = $(AM_CPPFLAGS) $(JobMarket_CFLAGS)
|
---|
[cc5db5] | 452 | Controller_LDADD = \
|
---|
[7da5cd] | 453 | libFragmentationAutomationController.la \
|
---|
[004d5c] | 454 | libMolecuilderJobs.la \
|
---|
[fbf143] | 455 | libMolecuilderFragmentationSummation.la \
|
---|
[fe0355] | 456 | libMolecuilderFragmentation_getFromKeysetStub.la \
|
---|
[a10cc0] | 457 | libMolecuilderFragmentation.la \
|
---|
| 458 | libMolecuilderHelpers.la \
|
---|
[004d5c] | 459 | $(JobMarket_Controller_LIBS) \
|
---|
| 460 | $(top_builddir)/LinearAlgebra/src/LinearAlgebra/libLinearAlgebra.la \
|
---|
[4d4ef8] | 461 | $(BOOST_SERIALIZATION_LIBS) \
|
---|
[7da5cd] | 462 | $(BOOST_PROGRAM_OPTIONS_LIBS) \
|
---|
| 463 | ${CodePatterns_LIBS}
|
---|
[fd4d5e] | 464 |
|
---|
[7da5cd] | 465 | PoolWorker_SOURCES = poolworker.cpp
|
---|
[4d4ef8] | 466 | PoolWorker_LDFLAGS = $(AM_LDFLAGS) $(BOOST_SERIALIZATION_LDFLAGS) $(BOOST_PROGRAM_OPTIONS_LDFLAGS) ${CodePatterns_LDFLAGS}
|
---|
[14de8e1] | 467 | PoolWorker_CPPFLAGS = $(AM_CPPFLAGS) $(JobMarket_CFLAGS)
|
---|
[cc5db5] | 468 | PoolWorker_LDADD = \
|
---|
[004d5c] | 469 | libMolecuilderJobs.la \
|
---|
[fbf143] | 470 | libMolecuilderFragmentationSummation.la \
|
---|
[004d5c] | 471 | ${JobMarket_PoolWorker_LIBS} \
|
---|
| 472 | $(top_builddir)/LinearAlgebra/src/LinearAlgebra/libLinearAlgebra.la \
|
---|
[4d4ef8] | 473 | $(BOOST_SERIALIZATION_LIBS) \
|
---|
| 474 | $(BOOST_PROGRAM_OPTIONS_LIBS) \
|
---|
[7da5cd] | 475 | ${CodePatterns_LIBS}
|
---|
[fd4d5e] | 476 |
|
---|
[7da5cd] | 477 | Server_SOURCES = Server.cpp
|
---|
[4d4ef8] | 478 | Server_LDFLAGS = $(AM_LDFLAGS) $(BOOST_SERIALIZATION_LDFLAGS) $(BOOST_PROGRAM_OPTIONS_LDFLAGS) ${CodePatterns_LDFLAGS}
|
---|
[14de8e1] | 479 | Server_CPPFLAGS = $(AM_CPPFLAGS) $(JobMarket_CFLAGS)
|
---|
[cc5db5] | 480 | Server_LDADD = \
|
---|
[004d5c] | 481 | libMolecuilderJobs.la \
|
---|
[fbf143] | 482 | libMolecuilderFragmentationSummation.la \
|
---|
[004d5c] | 483 | ${JobMarket_Server_LIBS} \
|
---|
| 484 | $(top_builddir)/LinearAlgebra/src/LinearAlgebra/libLinearAlgebra.la \
|
---|
[4d4ef8] | 485 | $(BOOST_SERIALIZATION_LIBS) \
|
---|
| 486 | $(BOOST_PROGRAM_OPTIONS_LIBS) \
|
---|
[7da5cd] | 487 | ${CodePatterns_LIBS}
|
---|
[004d5c] | 488 | endif
|
---|
[cc5db5] | 489 |
|
---|
[455573] | 490 | unity_SOURCES = unity.cpp
|
---|
[14de8e1] | 491 | unity_CPPFLAGS = $(AM_CPPFLAGS)
|
---|
[3b5fca] | 492 | unity_LDFLAGS = $(AM_LDFLAGS) $(BOOST_FILESYSTEM_LDFLAGS) $(BOOST_PROGRAM_OPTIONS_LDFLAGS) $(BOOST_RANDOM_LDFLAGS) $(BOOST_SYSTEM_LDFLAGS) $(BOOST_THREAD_LDFLAGS)
|
---|
[79de12] | 493 | unity_LDADD = \
|
---|
| 494 | ${CodePatterns_LIBS} \
|
---|
| 495 | $(BOOST_THREAD_LIBS) \
|
---|
| 496 | $(BOOST_PROGRAM_OPTIONS_LIBS) \
|
---|
| 497 | $(BOOST_RANDOM_LIBS) \
|
---|
[37ce5d] | 498 | $(BOOST_FILESYSTEM_LIBS) \
|
---|
| 499 | $(BOOST_SYSTEM_LIBS)
|
---|
[455573] | 500 |
|
---|
[65b6e0] | 501 |
|
---|
[a8eb4a] | 502 | FORCE:
|
---|
| 503 | $(srcdir)/.git-version: FORCE
|
---|
[f8be39] | 504 | @if (test -d $(top_srcdir)/.git && cd $(srcdir) \
|
---|
| 505 | && { git describe --dirty --always || git describe; } ) > .git-version-t 2>/dev/null \
|
---|
[a8eb4a] | 506 | && ! diff .git-version-t $(srcdir)/.git-version >/dev/null 2>&1; then \
|
---|
| 507 | mv -f .git-version-t $(srcdir)/.git-version; \
|
---|
| 508 | else \
|
---|
| 509 | rm -f .git-version-t; \
|
---|
| 510 | fi
|
---|
| 511 |
|
---|
[fd4d5e] | 512 | EXTRA_DIST += \
|
---|
[936a02] | 513 | $(srcdir)/.git-version \
|
---|
| 514 | $(bondtable_DATA) \
|
---|
| 515 | $(database_DATA) \
|
---|
| 516 | $(molecule_DATA)
|
---|
[a8eb4a] | 517 |
|
---|
| 518 | $(srcdir)/version.c: $(srcdir)/.git-version
|
---|
[5f8660a] | 519 | echo "const char *MOLECUILDERVERSION = \"$(PACKAGE_NAME) version "`cat $(srcdir)/.git-version`"\";" > $@
|
---|
[a8eb4a] | 520 |
|
---|
[b8d1aeb] | 521 |
|
---|
[d223d5] | 522 | unity.cpp: ${MOLECUILDERSOURCE} ${MOLECUILDERHEADER}
|
---|
| 523 | list='$(MOLECUILDERSOURCE)'; for file in $$list; do \
|
---|
[b0b086] | 524 | echo "#include \"$(srcdir)/$$file\"" >> unity.cpp; \
|
---|
[d223d5] | 525 | done; \
|
---|
| 526 | subdirs='$(SUBDIRS)';for directory in $$subdirs; do\
|
---|
| 527 | olddir=$$PWD;\
|
---|
| 528 | cd $$directory && make unity.cpp;\
|
---|
| 529 | cd $$olddir;\
|
---|
| 530 | echo "#include \"$$directory/unity.cpp\"" >> unity.cpp;\
|
---|
| 531 | done;\
|
---|
| 532 | echo "#include \"$(srcdir)/builder.cpp\"" >> unity.cpp;
|
---|
| 533 | echo "#include \"$(srcdir)/version.c\"" >> unity.cpp;
|
---|
| 534 |
|
---|
[455573] | 535 | MOSTLYCLEANFILES += unity.cpp
|
---|
[1ee3b8d] | 536 |
|
---|