/* Project: MoleCuilder * Description: creates and alters molecular systems * Copyright (C) 2017 Frederik Heber. All rights reserved. * * * This file is part of MoleCuilder. * * MoleCuilder is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 2 of the License, or * (at your option) any later version. * * MoleCuilder is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with MoleCuilder. If not, see . */ /** \file MPCJob_Work.cpp * * Function implementations for the class vector. * */ // include config.h #ifdef HAVE_CONFIG_H #include #endif #include #include "MPQCJob.hpp" #include "CodePatterns/Log.hpp" #include #ifdef HAVE_JOBMARKET // include headers that implement a archive in simple text format // otherwise BOOST_CLASS_EXPORT_IMPLEMENT has no effect #include #include #include "JobMarket/Results/FragmentResult.hpp" #include #include #include #include #include #include "mpqc.h" using namespace std; using namespace sc; FragmentResult::ptr MPQCJob::Work() { char mpqc[] = "mpqc" ; char **argv = new char*[1]; argv[0] = &mpqc[0]; int argc = 1; // now comes the actual work mpqc::InitValues initvalues; int nfilebase = (int) inputfile.length(); initvalues.in_char_array = new char[nfilebase + 1]; strncpy(initvalues.in_char_array, inputfile.c_str(), nfilebase); initvalues.in_char_array[nfilebase] = '\0'; initvalues.grp = MessageGrp::get_default_messagegrp(); // create unique, temporary name and check whether it exists char *tempfilename = NULL; { std::ifstream test; do { if (initvalues.output != NULL) // free buffer from last round delete initvalues.output; char filename_template[] = "mpqc_temp_XXXXXX\0"; char filename_suffix[] = ".in\0"; tempfilename = (char *) malloc ( (strlen(filename_template)+strlen(filename_suffix)+2)*(sizeof(char))); strncpy(tempfilename, mktemp(filename_template), strlen(filename_template)); tempfilename[strlen(filename_template)] = '\0'; strncat(tempfilename, filename_suffix, strlen(filename_suffix)); initvalues.output = tempfilename; //free(tempfilename); // don't free! output takes over pointer! test.open(initvalues.output); } while (test.good()); // test whether file does not(!) exist test.close(); } // put info how to sample the density into MPQCData MPQCData data(grid); data.DoLongrange = DoLongrange; // set whether we sample the density data.DoValenceOnly = DoValenceOnly; // set whether we sample just valence electron and nuclei densities // now call work horse try { mpqc::mainFunction(initvalues, argc, argv, static_cast(&data)); } catch (SCException &e) { cout << argv[0] << ": ERROR: SC EXCEPTION RAISED:" << endl << e.what() << endl; detail::clean_up(); } //delete[] in_char_array; // is deleted in mainFunction() if (initvalues.output != 0) { free(tempfilename); } delete[] argv; initvalues.grp = NULL; // place into returnstream std::stringstream returnstream; boost::archive::text_oarchive oa(returnstream); oa << data; FragmentResult::ptr s( new FragmentResult(getId(), returnstream.str()) ); if (s->exitflag != 0) cerr << "Job #" << s->getId() << " failed to reach desired accuracy." << endl; return s; } #else FragmentResult::ptr MPQCJob::Work() { // instantiate empty data const MPQCData data; std::stringstream returnstream; boost::archive::text_oarchive oa(returnstream); oa << data; // create the result FragmentResult::ptr ptr( new FragmentResult(getId(), returnstream.str()) ); if (data.desired_accuracy != 0.) { ptr->exitflag = data.accuracy < data.desired_accuracy ? 0 : 1; if (ptr->exitflag != 0) ELOG(1, "Job #" << ptr->getId() << " failed to reach desired accuracy."); } else { LOG(3, "INFO: No precision returned from MPQC job, not checking."); } return ptr; } #endif // we need to explicitly instantiate the serialization functions as // its is only serialized through its base class FragmentJob BOOST_CLASS_EXPORT_IMPLEMENT(MPQCJob)