| [bcf653] | 1 | /*
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 | 2 |  * Project: MoleCuilder
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 | 3 |  * Description: creates and alters molecular systems
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| [0aa122] | 4 |  * Copyright (C)  2010-2012 University of Bonn. All rights reserved.
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| [bcf653] | 5 |  * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
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 | 6 |  */
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 | 7 | 
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| [88b400] | 8 | /*
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 | 9 |  * defs.cpp
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 | 10 |  *
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 | 11 |  *  Created on: Aug 7, 2010
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 | 12 |  *      Author: heber
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 | 13 |  */
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 | 14 | 
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| [bf3817] | 15 | // include config.h
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 | 16 | #ifdef HAVE_CONFIG_H
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 | 17 | #include <config.h>
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 | 18 | #endif
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 | 19 | 
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| [ad011c] | 20 | #include "CodePatterns/MemDebug.hpp"
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| [bbbad5] | 21 | 
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| [e4fe8d] | 22 | #include "Helpers/defs.hpp"
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| [88b400] | 23 | 
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 | 24 | const double MYEPSILON=1e-13;   //!< machine epsilon precision
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 | 25 | const double AtomicLengthToAngstroem = 0.52917721; //!< conversion factor from atomic length/bohrradius to angstroem
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 | 26 | const double AtomicEnergyToKelvin = 315774.67;  //!< conversion factor from atomic energy to kelvin via boltzmann factor
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 | 27 | const double KelvinToAtomicTemperature = 3.1668152e-06;    //!< conversion factor for Kelvin to atomic temperature (Hartree over k_B)
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 | 28 | const double KelvinToeV = 8.6173422e-05;                   //!< conversion factor for Kelvin to Ht (k_B * T = energy), thus Boltzmann constant in eV/K
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 | 29 | const double AtomicMassUnitsToeV = 931494088.;        //!< conversion factor for atomic weight in units to mass in eV
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 | 30 | const double AtomicMassUnitsToHt = 34480864.;        //!< conversion factor for atomic weight in units to mass in Ht (protonmass/electronmass * electron_mass_in_Ht
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 | 31 | const double ElectronMass_Ht = 18778.865;            //!< electron mass in Ht
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 | 32 | const double ElectronMass_eV = 510998.903;           //!< electron mass in eV
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 | 33 | const double Units2Electronmass = (AtomicMassUnitsToeV/ElectronMass_eV); //!< atomic mass unit in eV/ electron mass in eV = 1 822.88863
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 | 34 | const double Atomictime2Femtoseconds = 0.024188843;     //!< Atomictime in fs
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 | 35 | 
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 | 36 | const char* VERSIONSTRING = "v1.0";
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 | 37 | 
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 | 38 | const char* LocalPath="./";
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 | 39 | 
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 | 40 | // various standard filenames
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 | 41 | const char *DEFAULTCONFIG = "main_pcp_linux";    //!< default filename of config file
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 | 42 | const char *CONVEXENVELOPE = "ConvexEnvelope.dat";    //!< default filename of convex envelope tecplot data file
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 | 43 | const char *KEYSETFILE = "KeySets.dat";    //!< default filename of BOSSANOVA key sets file
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 | 44 | const char *ADJACENCYFILE = "Adjacency.dat";    //!< default filename of BOSSANOVA adjacancy file
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 | 45 | const char *TEFACTORSFILE = "TE-Factors.dat";    //!< default filename of BOSSANOVA total energy factors file
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 | 46 | const char *FORCESFILE = "Forces-Factors.dat";    //!< default filename of BOSSANOVA force factors file
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 | 47 | const char *HCORRECTIONSUFFIX = "Hcorrection.dat";    //!< default filename of BOSSANOVA H correction file (unwanted saturation interaction)
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 | 48 | const char *FITCONSTANTSUFFIX = "FitConstant.dat";   //!< suffix of default filename of BOSSANOVA fit constants file (unwanted saturation interaction)
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 | 49 | const char *SHIELDINGSUFFIX = "sigma_all.csv";                //!< default filename of BOSSANOVA shieldings file
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 | 50 | const char *SHIELDINGPASSUFFIX = "sigma_all_PAS.csv";                 //!< default filename of BOSSANOVA shieldings PAS file
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 | 51 | const char *ORDERATSITEFILE = "OrderAtSite.dat";    //!< default filename of BOSSANOVA Bond Order at each atom file
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 | 52 | const char *ENERGYPERFRAGMENT = "EnergyPerFragment";    //!< default filename of BOSSANOVA Energy contribution Per Fragment file
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 | 53 | const char *FRAGMENTPREFIX = "BondFragment";    //!< default filename prefix of BOSSANOVA fragment config and directories
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 | 54 | const char *STANDARDCONFIG = "unknown.conf";    //!< default filename of standard config file
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 | 55 | const char *STANDARDELEMENTSDB = "elements.db";    //!< default filename of elements data base with masses, Z, VanDerWaals radii, ...
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| [67c92b] | 56 | const char *STANDARDELECTRONEGATIVITYDB = "electronegativity.db";    //!< default filename of electronegativity per element number data base
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| [88b400] | 57 | const char *STANDARDVALENCEDB = "valence.db";    //!< default filename of valence number per element database
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 | 58 | const char *STANDARDORBITALDB = "orbitals.db";    //!< default filename of orbitals per element database
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 | 59 | const char *STANDARDHBONDDISTANCEDB = "Hbonddistance.db";    //!< default filename of typial bond distance to hydrogen database
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 | 60 | const char *STANDARDHBONDANGLEDB = "Hbondangle.db";    //!< default filename of typial bond angle to hydrogen database
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| [064178] | 61 | const char *STANDARDCOLORDB = "color.db";    //!< default filename of typial bond angle to hydrogen database
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| [88b400] | 62 | 
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 | 63 | // some values
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 | 64 | const double SOLVENTDENSITY_A = 0.6022142;
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 | 65 | const double SOLVENTDENSITY_a0 = 0.089238936;
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 | 66 | 
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 | 67 | 
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 | 68 | const int UPDATECOUNT = 10;  //!< update ten sites per BOSSANOVA interval
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 | 69 | 
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 | 70 | const int STD_MENU_LENGTH = 60;
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 | 71 | const char STD_MENU_TITLE_SPACER = '=';
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 | 72 | const char STD_SEPERATOR_SPACER = '-';
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 | 73 | 
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 | 74 | const char *MOLECUILDER_NAME = "Molecuilder";
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