| 1 | /*
|
|---|
| 2 | * FunctionModel.hpp
|
|---|
| 3 | *
|
|---|
| 4 | * Created on: 02.10.2012
|
|---|
| 5 | * Author: heber
|
|---|
| 6 | */
|
|---|
| 7 |
|
|---|
| 8 | #ifndef FUNCTIONMODEL_HPP_
|
|---|
| 9 | #define FUNCTIONMODEL_HPP_
|
|---|
| 10 |
|
|---|
| 11 | // include config.h
|
|---|
| 12 | #ifdef HAVE_CONFIG_H
|
|---|
| 13 | #include <config.h>
|
|---|
| 14 | #endif
|
|---|
| 15 |
|
|---|
| 16 | #include <boost/function.hpp>
|
|---|
| 17 | #include <vector>
|
|---|
| 18 |
|
|---|
| 19 | #include "FunctionApproximation/FunctionArgument.hpp"
|
|---|
| 20 |
|
|---|
| 21 | class Fragment;
|
|---|
| 22 | class TrainingData;
|
|---|
| 23 |
|
|---|
| 24 | /** This class represents the interface for a given function to model a
|
|---|
| 25 | * high-dimensional data set in FunctionApproximation.
|
|---|
| 26 | *
|
|---|
| 27 | * As the parameters may be stored differently, the interface functions for
|
|---|
| 28 | * getting and setting them are as light-weight (and not speed-optimized)
|
|---|
| 29 | * as possible.
|
|---|
| 30 | *
|
|---|
| 31 | */
|
|---|
| 32 | class FunctionModel
|
|---|
| 33 | {
|
|---|
| 34 | public:
|
|---|
| 35 | //!> typedef for a single parameter degree of freedom of the function
|
|---|
| 36 | typedef double parameter_t;
|
|---|
| 37 | //!> typedef for the whole set of parameters of the function
|
|---|
| 38 | typedef std::vector<parameter_t> parameters_t;
|
|---|
| 39 | //!> typedef for the argument vector as input to the function
|
|---|
| 40 | typedef std::vector<argument_t> arguments_t;
|
|---|
| 41 | //!> typedef for a single result degree of freedom
|
|---|
| 42 | typedef double result_t;
|
|---|
| 43 | //!> typedef for the result vector as returned by the function
|
|---|
| 44 | typedef std::vector<result_t> results_t;
|
|---|
| 45 | //!> typedef for a function containing how to extract required information from a Fragment.
|
|---|
| 46 | typedef boost::function< arguments_t (const Fragment &, const size_t)> extractor_t;
|
|---|
| 47 | //!> typedef for a vector of particle tyoes
|
|---|
| 48 | typedef std::vector< double > charges_t;
|
|---|
| 49 | //!> typedef for the magic triple function that gets the other two distances for a given argument
|
|---|
| 50 | typedef boost::function< std::vector<arguments_t>(const argument_t &, const double)> triplefunction_t;
|
|---|
| 51 |
|
|---|
| 52 | public:
|
|---|
| 53 | FunctionModel() {}
|
|---|
| 54 | virtual ~FunctionModel() {}
|
|---|
| 55 |
|
|---|
| 56 | /** Setter for the parameters of the model function.
|
|---|
| 57 | *
|
|---|
| 58 | * \param params set of parameters to set
|
|---|
| 59 | */
|
|---|
| 60 | virtual void setParameters(const parameters_t ¶ms)=0;
|
|---|
| 61 |
|
|---|
| 62 | /** Getter for the parameters of this model function.
|
|---|
| 63 | *
|
|---|
| 64 | * \return current set of parameters of the model function
|
|---|
| 65 | */
|
|---|
| 66 | virtual parameters_t getParameters() const=0;
|
|---|
| 67 |
|
|---|
| 68 | /** Sets the parameter randomly within the sensible range of each parameter.
|
|---|
| 69 | *
|
|---|
| 70 | * \param data container with training data for guesstimating range
|
|---|
| 71 | */
|
|---|
| 72 | virtual void setParametersToRandomInitialValues(const TrainingData &data)=0;
|
|---|
| 73 |
|
|---|
| 74 | /** Getter for the number of parameters of this model function.
|
|---|
| 75 | *
|
|---|
| 76 | * \return number of parameters
|
|---|
| 77 | */
|
|---|
| 78 | virtual size_t getParameterDimension() const=0;
|
|---|
| 79 |
|
|---|
| 80 | /** Sets the magic triple function that we use for getting angle distances.
|
|---|
| 81 | *
|
|---|
| 82 | * @param _triplefunction function that returns a list of triples (i.e. the
|
|---|
| 83 | * two remaining distances) to a given pair of points (contained as
|
|---|
| 84 | * indices within the argument)
|
|---|
| 85 | */
|
|---|
| 86 | virtual void setTriplefunction(triplefunction_t &_triplefunction)
|
|---|
| 87 | {}
|
|---|
| 88 |
|
|---|
| 89 | /** Evaluates the function with the given \a arguments and the current set of
|
|---|
| 90 | * parameters.
|
|---|
| 91 | *
|
|---|
| 92 | * \param arguments set of arguments as input variables to the function
|
|---|
| 93 | * \return result of the function
|
|---|
| 94 | */
|
|---|
| 95 | virtual results_t operator()(const arguments_t &arguments) const=0;
|
|---|
| 96 |
|
|---|
| 97 | /** Evaluates the derivative of the function with the given \a arguments
|
|---|
| 98 | * with respect to a specific parameter indicated by \a index.
|
|---|
| 99 | *
|
|---|
| 100 | * \param arguments set of arguments as input variables to the function
|
|---|
| 101 | * \param index derivative of which parameter
|
|---|
| 102 | * \return result vector containing the derivative with respect to the given
|
|---|
| 103 | * input
|
|---|
| 104 | */
|
|---|
| 105 | virtual results_t parameter_derivative(const arguments_t &arguments, const size_t index) const=0;
|
|---|
| 106 |
|
|---|
| 107 | /** States whether lower and upper boundaries should be used to constraint
|
|---|
| 108 | * the parameter search for this function model.
|
|---|
| 109 | *
|
|---|
| 110 | * \return true - constraints should be used, false - else
|
|---|
| 111 | */
|
|---|
| 112 | virtual bool isBoxConstraint() const=0;
|
|---|
| 113 |
|
|---|
| 114 | /** Returns a vector which are the lower boundaries for each parameter_t
|
|---|
| 115 | * of this FunctionModel.
|
|---|
| 116 | *
|
|---|
| 117 | * \return vector of parameter_t resembling lowest allowed values
|
|---|
| 118 | */
|
|---|
| 119 | virtual parameters_t getLowerBoxConstraints() const=0;
|
|---|
| 120 |
|
|---|
| 121 | /** Returns a vector which are the upper boundaries for each parameter_t
|
|---|
| 122 | * of this FunctionModel.
|
|---|
| 123 | *
|
|---|
| 124 | * \return vector of parameter_t resembling highest allowed values
|
|---|
| 125 | */
|
|---|
| 126 | virtual parameters_t getUpperBoxConstraints() const=0;
|
|---|
| 127 |
|
|---|
| 128 | /** Returns a bound function to be used with TrainingData, extracting distances
|
|---|
| 129 | * from a Fragment.
|
|---|
| 130 | *
|
|---|
| 131 | * \param charges vector of charges to be extracted
|
|---|
| 132 | * \return bound function extracting distances from a fragment
|
|---|
| 133 | */
|
|---|
| 134 | virtual extractor_t getFragmentSpecificExtractor(const charges_t &charges) const=0;
|
|---|
| 135 | };
|
|---|
| 136 |
|
|---|
| 137 | #endif /* FUNCTIONMODEL_HPP_ */
|
|---|