/*
* Project: MoleCuilder
* Description: creates and alters molecular systems
* Copyright (C) 2012 University of Bonn. All rights reserved.
*
*
* This file is part of MoleCuilder.
*
* MoleCuilder is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 2 of the License, or
* (at your option) any later version.
*
* MoleCuilder is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with MoleCuilder. If not, see .
*/
/*
* HistogramUnitTest.cpp
*
* Created on: Jul 26, 2012
* Author: heber
*/
// include config.h
#ifdef HAVE_CONFIG_H
#include
#endif
using namespace std;
#include
#include
#include
#include "Fragmentation/SetValues/Histogram.hpp"
#include "HistogramUnitTest.hpp"
#include
#include
#include
#include "CodePatterns/Assert.hpp"
#ifdef HAVE_TESTRUNNER
#include "UnitTestMain.hpp"
#endif /*HAVE_TESTRUNNER*/
using namespace boost::assign;
/********************************************** Test classes **************************************/
// Registers the fixture into the 'registry'
CPPUNIT_TEST_SUITE_REGISTRATION( HistogramTest );
void HistogramTest::setUp()
{
// failing asserts should be thrown
ASSERT_DO(Assert::Throw);
histogram = NULL;
}
void HistogramTest::tearDown()
{
delete histogram;
}
/** UnitTest for checking internal state after given samples
*/
void HistogramTest::internalState_Test()
{
// generate non-empty histogramgram
Histogram::samples_t sampled_values;
sampled_values += 1.,2.,3.,4.;
CPPUNIT_ASSERT_EQUAL( (size_t)4, sampled_values.size() );
histogram = new Histogram(sampled_values, 1., 1.);
CPPUNIT_ASSERT_EQUAL( (size_t)4+1, histogram->bins.size() );
CPPUNIT_ASSERT( histogram->bins.end() != histogram->bins.begin() );
CPPUNIT_ASSERT_EQUAL( 1., histogram->bins.begin()->second );
CPPUNIT_ASSERT_EQUAL( 0., (--histogram->bins.end())->second );
}
/** UnitTest for getLowerEndBin()
*/
void HistogramTest::getLowerEndBin_Test()
{
// generate non-empty histogramgram
Histogram::samples_t sampled_values;
sampled_values += 1.,2.,3.,4.;
CPPUNIT_ASSERT_EQUAL( (size_t)4, sampled_values.size() );
histogram = new Histogram(sampled_values, 1., 1.);
// check values inside
CPPUNIT_ASSERT( histogram->bins.end() != histogram->getLowerEndBin(1.) );
CPPUNIT_ASSERT_EQUAL( 1., histogram->getLowerEndBin(1.)->first );
CPPUNIT_ASSERT( histogram->bins.end() != histogram->getLowerEndBin(2.) );
CPPUNIT_ASSERT_EQUAL( 2., histogram->getLowerEndBin(2.)->first );
CPPUNIT_ASSERT( histogram->bins.end() != histogram->getLowerEndBin(3.) );
CPPUNIT_ASSERT_EQUAL( 3., histogram->getLowerEndBin(3.)->first );
CPPUNIT_ASSERT( histogram->bins.end() != histogram->getLowerEndBin(4.) );
CPPUNIT_ASSERT_EQUAL( 4., histogram->getLowerEndBin(4.)->first );
CPPUNIT_ASSERT( histogram->bins.end() != histogram->getLowerEndBin(1.5) );
CPPUNIT_ASSERT_EQUAL( 1., histogram->getLowerEndBin(1.5)->first );
CPPUNIT_ASSERT( histogram->bins.end() != histogram->getLowerEndBin(2.5) );
CPPUNIT_ASSERT_EQUAL( 2., histogram->getLowerEndBin(2.5)->first );
CPPUNIT_ASSERT( histogram->bins.end() != histogram->getLowerEndBin(3.5) );
CPPUNIT_ASSERT_EQUAL( 3., histogram->getLowerEndBin(3.5)->first );
CPPUNIT_ASSERT( histogram->bins.end() != histogram->getLowerEndBin(4.5) );
CPPUNIT_ASSERT_EQUAL( 4., histogram->getLowerEndBin(4.5)->first );
// check values outside
CPPUNIT_ASSERT( histogram->bins.end() == histogram->getLowerEndBin(.9) );
CPPUNIT_ASSERT( histogram->bins.end() == histogram->getLowerEndBin(5.01) );
CPPUNIT_ASSERT( histogram->bins.end() == histogram->getLowerEndBin(5.) );
}
/** UnitTest for getHigherEndBin()
*/
void HistogramTest::getHigherEndBin_Test()
{
// generate non-empty histogramgram
Histogram::samples_t sampled_values;
sampled_values += 1.,2.,3.,4.;
CPPUNIT_ASSERT_EQUAL( (size_t)4, sampled_values.size() );
histogram = new Histogram(sampled_values, 1., 1.);
// check values inside
CPPUNIT_ASSERT( histogram->bins.end() != histogram->getHigherEndBin(.5) );
CPPUNIT_ASSERT_EQUAL( 1., histogram->getHigherEndBin(.5)->first );
CPPUNIT_ASSERT( histogram->bins.end() != histogram->getHigherEndBin(1.) );
CPPUNIT_ASSERT_EQUAL( 2., histogram->getHigherEndBin(1.)->first );
CPPUNIT_ASSERT( histogram->bins.end() != histogram->getHigherEndBin(2.) );
CPPUNIT_ASSERT_EQUAL( 3., histogram->getHigherEndBin(2.)->first );
CPPUNIT_ASSERT( histogram->bins.end() != histogram->getHigherEndBin(3.) );
CPPUNIT_ASSERT_EQUAL( 4., histogram->getHigherEndBin(3.)->first );
CPPUNIT_ASSERT( histogram->bins.end() != histogram->getHigherEndBin(4.) );
CPPUNIT_ASSERT_EQUAL( 5., histogram->getHigherEndBin(4.)->first );
CPPUNIT_ASSERT( histogram->bins.end() == histogram->getHigherEndBin(5.) );
CPPUNIT_ASSERT( histogram->bins.end() != histogram->getHigherEndBin(1.5) );
CPPUNIT_ASSERT_EQUAL( 2., histogram->getHigherEndBin(1.5)->first );
CPPUNIT_ASSERT( histogram->bins.end() != histogram->getHigherEndBin(2.5) );
CPPUNIT_ASSERT_EQUAL( 3., histogram->getHigherEndBin(2.5)->first );
CPPUNIT_ASSERT( histogram->bins.end() != histogram->getHigherEndBin(3.5) );
CPPUNIT_ASSERT_EQUAL( 4., histogram->getHigherEndBin(3.5)->first );
CPPUNIT_ASSERT( histogram->bins.end() != histogram->getHigherEndBin(4.5) );
CPPUNIT_ASSERT_EQUAL( 5., histogram->getHigherEndBin(4.5)->first );
CPPUNIT_ASSERT( histogram->bins.end() == histogram->getHigherEndBin(5.5) );
// check values outside
CPPUNIT_ASSERT( histogram->bins.end() != histogram->getHigherEndBin(-.1) );
CPPUNIT_ASSERT_EQUAL( 1., histogram->getHigherEndBin(-.1)->first );
CPPUNIT_ASSERT( histogram->bins.end() == histogram->getHigherEndBin(5.01) );
CPPUNIT_ASSERT( histogram->bins.end() == histogram->getHigherEndBin(5.) );
}
/** UnitTest for getLowerEnd()
*/
void HistogramTest::getLowerEnd_Test()
{
// create non-empty histogram and test
Histogram::samples_t sampled_values;
sampled_values += 1.,2.,3.,4.;
histogram = new Histogram(sampled_values, 1., 1.);
// go through each bin and check against getLowerEnd()
for (Histogram::Bins_t::const_iterator iter = histogram->bins.begin();
iter != histogram->bins.end(); ++iter)
CPPUNIT_ASSERT_EQUAL( iter->first, histogram->getLowerEnd(iter->first) );
CPPUNIT_ASSERT_EQUAL( 7., histogram->getLowerEnd(7.2) );
CPPUNIT_ASSERT_EQUAL( -5., histogram->getLowerEnd(-4.5) );
CPPUNIT_ASSERT_EQUAL( 4000., histogram->getLowerEnd(4000.1) );
CPPUNIT_ASSERT_EQUAL( -4001., histogram->getLowerEnd(-4000.9) );
}
/** UnitTest for isEmpty()
*/
void HistogramTest::isEmpty_Test()
{
histogram = new Histogram(1., 1.);
// test on empty histogramgram
CPPUNIT_ASSERT( histogram->isEmpty() );
// create non-empty histogram and test
Histogram::samples_t sampled_values;
sampled_values += 1.,2.,3.,4.;
delete histogram;
histogram = new Histogram(sampled_values, 1., 1.);
CPPUNIT_ASSERT( !histogram->isEmpty() );
}
/** UnitTest for area()
*/
void HistogramTest::areaTest()
{
histogram = new Histogram(1., 1.);
// test on empty histogramgram
CPPUNIT_ASSERT_EQUAL( 0., histogram->area() );
// create non-empty histogram and sum up
Histogram::samples_t sampled_values;
sampled_values += 1.,2.,3.,4., 4.;
delete histogram;
histogram = new Histogram(sampled_values, 1., 1.);
CPPUNIT_ASSERT_EQUAL( 5., histogram->area() );
Histogram::samples_t more_values;
more_values += 1.75,2.5,3.;
Histogram otherhistogram(more_values, 1.75, .625);
CPPUNIT_ASSERT_EQUAL( 3., otherhistogram.area() );
}
/** UnitTest for superposeOtherHistogram()
*/
void HistogramTest::superposeOtherHistogram_Test()
{
// create two histograms, one is larger
Histogram::samples_t sampled_values;
sampled_values += 1.,2.,3.,4.;
histogram = new Histogram(sampled_values, 1., 1.);
Histogram::samples_t more_values;
more_values += 1.75,2.5,3.;
Histogram otherhistogram(more_values, 1.75, .625);
// check that size increases
CPPUNIT_ASSERT_EQUAL( (size_t)3+1, otherhistogram.bins.size() );
otherhistogram += *histogram;
const size_t number = (size_t)((
otherhistogram.getLowerEnd(4.+histogram->binwidth)
+ otherhistogram.binwidth
- otherhistogram.getLowerEnd(1.))/otherhistogram.binwidth)+1;
CPPUNIT_ASSERT_EQUAL( number, otherhistogram.bins.size() );
}
/** UnitTest for operator+=()
*/
void HistogramTest::operatorPlusEqual_Test()
{
// create non-empty histograms and sum them
Histogram::samples_t sampled_values;
sampled_values += 1.,2.,3.,4.;
histogram = new Histogram(sampled_values, 1., 1.);
// add upon larger
{
Histogram::samples_t more_values;
more_values += 0.5, 1.25, 2.5,3., 4.2;
Histogram otherhistogram(more_values, 0.5, .625);
const double areas = histogram->area() + otherhistogram.area();
// check that sum is now sum of both
otherhistogram += *histogram;
// CPPUNIT_ASSERT_EQUAL( areas, otherhistogram.area() );
CPPUNIT_ASSERT( fabs(areas - otherhistogram.area()) < std::numeric_limits::epsilon()*1e+1 );
}
// add upon smaller
{
Histogram::samples_t more_values;
more_values += 1.75,2.5,3.;
Histogram otherhistogram(more_values, 1.75, .625);
const double areas = histogram->area() + otherhistogram.area();
// check that sum is now sum of both
otherhistogram += *histogram;
// CPPUNIT_ASSERT_EQUAL( areas, otherhistogram.area() );
CPPUNIT_ASSERT( fabs(areas - otherhistogram.area()) < std::numeric_limits::epsilon()*1e+1 );
}
}
/** UnitTest for operator-=()
*/
void HistogramTest::operatorMinusEqual_Test()
{
// create non-empty histograms and sum them
Histogram::samples_t sampled_values;
sampled_values += 1.,2.,3.,4.;
histogram = new Histogram(sampled_values, 1., 1.);
// subtract smaller
{
Histogram::samples_t more_values;
more_values += 0.5, 1.25, 2.5,3., 4.2;
Histogram otherhistogram(more_values, 0.5, .625);
const double difference = otherhistogram.area() - histogram->area();
// check that sum is now difference of both
otherhistogram -= *histogram;
// CPPUNIT_ASSERT_EQUAL( difference, otherhistogram.area() );
CPPUNIT_ASSERT( fabs(difference - otherhistogram.area()) < std::numeric_limits::epsilon()*1e+1 );
}
// subtract larger
{
Histogram::samples_t more_values;
more_values += 1.75,2.5,3.;
Histogram otherhistogram(more_values, 1.75, .625);
const double difference = otherhistogram.area() - histogram->area();
// check that sum is now difference of both
otherhistogram -= *histogram;
// CPPUNIT_ASSERT_EQUAL( difference, otherhistogram.area() );
CPPUNIT_ASSERT( fabs(difference - otherhistogram.area()) < std::numeric_limits::epsilon()*1e+1 );
}
}