| 1 | /* | 
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| 2 | * Project: MoleCuilder | 
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| 3 | * Description: creates and alters molecular systems | 
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| 4 | * Copyright (C)  2012 University of Bonn. All rights reserved. | 
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| 5 | * | 
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| 6 | * | 
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| 7 | *   This file is part of MoleCuilder. | 
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| 8 | * | 
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| 9 | *    MoleCuilder is free software: you can redistribute it and/or modify | 
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| 10 | *    it under the terms of the GNU General Public License as published by | 
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| 11 | *    the Free Software Foundation, either version 2 of the License, or | 
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| 12 | *    (at your option) any later version. | 
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| 13 | * | 
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| 14 | *    MoleCuilder is distributed in the hope that it will be useful, | 
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| 15 | *    but WITHOUT ANY WARRANTY; without even the implied warranty of | 
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| 16 | *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
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| 17 | *    GNU General Public License for more details. | 
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| 18 | * | 
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| 19 | *    You should have received a copy of the GNU General Public License | 
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| 20 | *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>. | 
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| 21 | */ | 
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| 22 |  | 
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| 23 | /* | 
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| 24 | * IndexedVectors.cpp | 
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| 25 | * | 
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| 26 | *  Created on: 29.07.2012 | 
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| 27 | *      Author: heber | 
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| 28 | */ | 
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| 29 |  | 
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| 30 | // include config.h | 
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| 31 | #ifdef HAVE_CONFIG_H | 
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| 32 | #include <config.h> | 
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| 33 | #endif | 
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| 34 |  | 
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| 35 | #include "CodePatterns/MemDebug.hpp" | 
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| 36 |  | 
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| 37 | #include "Fragmentation/SetValues/IndexedVectors.hpp" | 
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| 38 |  | 
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| 39 | #include <iostream> | 
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| 40 |  | 
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| 41 | #include "CodePatterns/Assert.hpp" | 
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| 42 |  | 
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| 43 | // static member variables | 
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| 44 | const size_t IndexedVectors::FixedSize = 3; | 
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| 45 | const IndexedVectors::vector_t IndexedVectors::nullvector( FixedSize, 0.); | 
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| 46 |  | 
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| 47 | IndexedVectors::IndexedVectors(const indices_t &_indices, const vectors_t &_vectors) | 
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| 48 | { | 
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| 49 | ASSERT(_indices.size() == _vectors.size(), | 
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| 50 | "IndexedVectors::IndexedVectors() - vector of indices and vectors don't match in size."); | 
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| 51 | indices_t::const_iterator indexiter = _indices.begin(); | 
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| 52 | vectors_t::const_iterator vectoriter = _vectors.begin(); | 
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| 53 | for (; vectoriter != _vectors.end(); ++indexiter, ++vectoriter) { | 
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| 54 | ASSERT( vectoriter->size() == FixedSize, | 
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| 55 | "IndexedVectors::IndexedVectors() - vector to instance " | 
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| 56 | +toString(*indexiter)+" has size " | 
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| 57 | +toString(vectoriter->size())+" different to FixedSize " | 
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| 58 | +toString(FixedSize)+"."); | 
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| 59 | if (*indexiter != (size_t)DropIndex) { // skip all force vectors associated to -1 | 
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| 60 | #ifndef NDEBUG | 
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| 61 | std::pair<indexedvectors_t::iterator, bool> inserter = | 
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| 62 | #endif | 
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| 63 | vectors.insert( std::make_pair( *indexiter, *vectoriter) ); | 
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| 64 | ASSERT( inserter.second, | 
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| 65 | "IndexedVectors::IndexedVectors() - index " | 
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| 66 | +toString(inserter.first->first)+" already present with vector " | 
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| 67 | +toString(inserter.first->second)+"."); | 
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| 68 | } | 
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| 69 | } | 
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| 70 | } | 
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| 71 |  | 
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| 72 | IndexedVectors& IndexedVectors::operator=(const IndexedVectors &other) | 
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| 73 | { | 
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| 74 | // check for self-assignment | 
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| 75 | if (this != &other) { | 
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| 76 | vectors.clear(); | 
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| 77 | vectors = other.vectors; | 
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| 78 | } | 
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| 79 | return *this; | 
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| 80 | } | 
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| 81 |  | 
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| 82 | void IndexedVectors::superposeOtherIndexedVectors(const IndexedVectors &other, const double prefactor) | 
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| 83 | { | 
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| 84 | for (indexedvectors_t::const_iterator otheriter = other.vectors.begin(); | 
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| 85 | otheriter != other.vectors.end(); ++otheriter) { | 
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| 86 | indexedvectors_t::iterator iter = vectors.find(otheriter->first); | 
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| 87 | if (iter == vectors.end()) { | 
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| 88 | // index does not exist | 
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| 89 | std::pair<indexedvectors_t::iterator, bool> inserter = | 
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| 90 | vectors.insert( std::make_pair( otheriter->first, nullvector) ); | 
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| 91 | ASSERT( inserter.second, | 
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| 92 | "IndexedVectors::superposeOtherIndexedVectors() - index is present though unfound before?"); | 
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| 93 | iter = inserter.first; | 
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| 94 | } | 
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| 95 | // now simply vector to index from other instance add with prefactor | 
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| 96 | vector_t::iterator vectoriter = iter->second.begin(); | 
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| 97 | vector_t::const_iterator othervectoriter = otheriter->second.begin(); | 
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| 98 | for (;vectoriter != iter->second.end(); ++vectoriter, ++othervectoriter) { | 
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| 99 | *vectoriter += prefactor * (*othervectoriter); | 
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| 100 | } | 
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| 101 | } | 
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| 102 | } | 
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| 103 |  | 
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| 104 | std::ostream & operator<<(std::ostream &ost, const IndexedVectors &other) | 
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| 105 | { | 
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| 106 | for (IndexedVectors::indexedvectors_t::const_iterator iter = other.vectors.begin(); | 
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| 107 | iter != other.vectors.end(); ++iter) | 
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| 108 | ost << "(" << iter->first << "," << iter->second << ") "; | 
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| 109 | return ost; | 
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| 110 | } | 
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