[c74fdb] | 1 | /*
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| 2 | * Fragment.hpp
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| 3 | *
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| 4 | * Created on: Aug 8, 2012
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| 5 | * Author: heber
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| 6 | */
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| 7 |
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| 8 | #ifndef FRAGMENT_HPP_
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| 9 | #define FRAGMENT_HPP_
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| 10 |
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| 11 |
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| 12 | // include config.h
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| 13 | #ifdef HAVE_CONFIG_H
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| 14 | #include <config.h>
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| 15 | #endif
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| 16 |
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[184943] | 17 | #include <iosfwd>
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[c74fdb] | 18 | #include <vector>
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| 19 |
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[f3bc5f] | 20 | class FragmentTest;
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| 21 |
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[c74fdb] | 22 | class Fragment {
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[184943] | 23 | //!> grant ostream operator access
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| 24 | friend std::ostream & operator<<(std::ostream &ost, const Fragment &f);
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[f3bc5f] | 25 | //!> grant unit test access
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| 26 | friend class FragmentTest;
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[c74fdb] | 27 | public:
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[f3bc5f] | 28 | typedef std::vector<double> position_t;
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| 29 | typedef std::vector< position_t > positions_t;
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[c74fdb] | 30 | typedef std::vector< double > charges_t;
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[f3bc5f] | 31 | typedef std::pair< position_t, double> nucleus_t;
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[c74fdb] | 32 | typedef std::vector< nucleus_t > nuclei_t;
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| 33 |
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| 34 | /** Default constructor of class Fragment.
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| 35 | *
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| 36 | */
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| 37 | Fragment();
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| 38 |
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| 39 | /** Default constructor of class Fragment.
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| 40 | *
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| 41 | */
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| 42 | Fragment(const nuclei_t &_nuclei) :
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| 43 | nuclei(_nuclei)
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| 44 | {}
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| 45 |
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| 46 | /** Constructor of class Fragment.
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| 47 | *
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| 48 | * @param _positions given positions
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| 49 | * @param _charges given charges
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| 50 | */
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[f3bc5f] | 51 | Fragment(const positions_t &_positions, const charges_t &_charges);
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[c74fdb] | 52 |
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| 53 | /** Adding another fragment onto this one.
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| 54 | *
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| 55 | * \note The operation is area-conserving, i.e. the new area is the sum of
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| 56 | * both areas.
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| 57 | *
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| 58 | * @param other other fragment
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| 59 | * @return ref to this instance
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| 60 | */
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| 61 | Fragment& operator+=(const Fragment &other);
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| 62 |
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| 63 | /** Assignment operator.
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| 64 | *
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| 65 | * @param other other fragment to make ourselves equal to
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| 66 | * @return ref to this instance
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| 67 | */
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| 68 | Fragment& operator=(const Fragment &other);
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| 69 |
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| 70 | /** Subtracting another fragment from this one.
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| 71 | *
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| 72 | * @param other other fragment
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| 73 | * @return ref to this instance
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| 74 | */
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| 75 | Fragment& operator-=(const Fragment &other);
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| 76 |
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[184943] | 77 | /** Getter for all stored positions.
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| 78 | *
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| 79 | * @return vector of positions
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| 80 | */
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| 81 | positions_t getPositions() const;
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| 82 |
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| 83 | /** Getter for all stored charges.
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| 84 | *
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| 85 | * @return vector of charges
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| 86 | */
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| 87 | charges_t getCharges() const;
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| 88 |
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[f3bc5f] | 89 | /** Equality operator.
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| 90 | *
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| 91 | * @param other other instance to check against
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| 92 | * @return true - both are equal, false - some nucleus_t differ
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| 93 | */
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| 94 | bool operator==(const Fragment& other) const;
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| 95 |
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| 96 | bool operator!=(const Fragment& other) const
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| 97 | {
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| 98 | return (!(*this == other));
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| 99 | }
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| 100 |
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| 101 | /** Creates type nucleus_t from given \a position and \a charge.
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| 102 | *
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| 103 | * @param position position of nucleus to create
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| 104 | * @param charge charge of nucleus to create
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| 105 | * @return nucleus with given \a position and \a charge
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| 106 | */
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| 107 | static nucleus_t createNucleus(const position_t &position, const double charge);
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| 108 |
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| 109 | /** Helper function to check whether two positions are equal.
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| 110 | *
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| 111 | * @param a first position
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| 112 | * @param b second position
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| 113 | * @return a equals b within numerical precision
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| 114 | */
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| 115 | static bool isPositionEqual(const position_t &a, const position_t &b);
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| 116 |
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[c74fdb] | 117 | private:
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[f3bc5f] | 118 | /** Helper function that checks whether this nuclei \b position is present.
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[c74fdb] | 119 | *
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| 120 | * This operation is \f${\cal O}(n)\f$
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| 121 | *
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| 122 | * @param n nuclei to check
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| 123 | * @return true - is contained, false - is not contained
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| 124 | */
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| 125 | bool containsNuclei(const nucleus_t &n) const;
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| 126 |
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[f3bc5f] | 127 | /** Seeks through all nuclei and removes one with matching \b position if found.
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[c74fdb] | 128 | *
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| 129 | * @param n nuclei to remove
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| 130 | */
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| 131 | void removeNuclei(const nucleus_t &n);
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| 132 |
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| 133 | private:
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| 134 | nuclei_t nuclei;
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| 135 | };
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| 136 |
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[f3bc5f] | 137 | /** Equality operator for two nuclei.
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| 138 | *
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| 139 | * @param a first nuclei
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| 140 | * @param b second nuclei
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| 141 | * @return true - both have same position and charge, false - either charge or position is different
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| 142 | */
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| 143 | bool operator==(const Fragment::nucleus_t &a, const Fragment::nucleus_t &b);
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| 144 |
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| 145 | std::ostream & operator<<(std::ostream &ost, const Fragment::nucleus_t &n);
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| 146 |
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[184943] | 147 | std::ostream & operator<<(std::ostream &ost, const Fragment &f);
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| 148 |
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[c74fdb] | 149 | template<typename T> T ZeroInstance();
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| 150 | template<> Fragment ZeroInstance<Fragment>();
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| 151 |
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| 152 | #endif /* FRAGMENT_HPP_ */
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