source: src/Fragmentation/KeySet.cpp@ 311137

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Last change on this file since 311137 was 0aa122, checked in by Frederik Heber <heber@…>, 13 years ago

Updated all source files's copyright note to current year 2012.

  • Property mode set to 100644
File size: 2.3 KB
Line 
1/*
2 * Project: MoleCuilder
3 * Description: creates and alters molecular systems
4 * Copyright (C) 2010-2012 University of Bonn. All rights reserved.
5 * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
6 */
7
8/*
9 * KeySet.cpp
10 *
11 * Created on: Oct 20, 2011
12 * Author: heber
13 */
14
15#ifdef HAVE_CONFIG_H
16#include <config.h>
17#endif
18
19#include "CodePatterns/MemDebug.hpp"
20
21#include <sstream>
22
23#include "CodePatterns/Log.hpp"
24
25#include "KeySet.hpp"
26
27/** Constructor of class KeySet.
28 *
29 * This class contains a set of indices for the atoms contained in a fragment.
30 *
31 */
32KeySet::KeySet()
33{}
34
35/** Destructor of class KeySet.
36 *
37 */
38KeySet::~KeySet()
39{}
40
41
42/** Comparator to allow for placing in a map.
43 *
44 * @param a instance to compare to
45 * @return true - this instance has less items or the first different item itself is less,
46 * false - else
47 */
48bool KeySet::operator<(const KeySet &a) const
49{
50 //LOG(0, "my check is used.");
51 if (size() < a.size()) {
52 return true;
53 } else {
54 if (size() > a.size()) {
55 return false;
56 } else {
57 KeySet::iterator IteratorA = begin();
58 KeySet::iterator IteratorB = a.begin();
59 while ((IteratorA != end()) && (IteratorB != a.end())) {
60 if ((*IteratorA) < (*IteratorB))
61 return true;
62 else if ((*IteratorA) > (*IteratorB)) {
63 return false;
64 } // else, go on to next index
65 IteratorA++;
66 IteratorB++;
67 } // end of while loop
68 }// end of check in case of equal sizes
69 }
70 return false; // if we reach this point, they are equal
71}
72
73/** Scans a single line for number and puts them into \a KeySet.
74 * \param *buffer buffer to scan
75 * \return true - at least one valid atom id parsed, false - CurrentSet is empty
76 */
77bool KeySet::ScanBufferIntoKeySet(char *buffer)
78{
79 std::stringstream line;
80 int AtomNr;
81 int status = 0;
82
83 line.str(buffer);
84 while (!line.eof()) {
85 line >> AtomNr;
86 if (AtomNr >= 0) {
87 insert(AtomNr); // insert at end, hence in same order as in file!
88 status++;
89 } // else it's "-1" or else and thus must not be added
90 }
91 std::stringstream output;
92 for(KeySet::iterator runner = begin(); runner != end(); runner++)
93 output << (runner == begin() ? "" : " " ) << (*runner);
94 LOG(2, "INFO: The scanned KeySet is " << output.str());
95 return (status != 0);
96}
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