source: src/Fragmentation/Converter/DataConverter.hpp@ 830b3e

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Last change on this file since 830b3e was 4aee30, checked in by Frederik Heber <heber@…>, 12 years ago

Timings of MPQCJob are now gathered for total and for the gathering process.

  • the gathering process e.g. includes sampling of electron density.
  • Property mode set to 100644
File size: 7.1 KB
RevLine 
[0398bd]1/*
2 * DataConverter.hpp
3 *
4 * Created on: Aug 27, 2012
5 * Author: heber
6 */
7
8#ifndef DATACONVERTER_HPP_
9#define DATACONVERTER_HPP_
10
11
12// include config.h
13#ifdef HAVE_CONFIG_H
14#include <config.h>
15#endif
16
[c9f9bb]17#include <map>
[0398bd]18#include <boost/fusion/sequence.hpp>
19
20#include "CodePatterns/Assert.hpp"
21
22#include "JobMarket/types.hpp"
23
24#include "Fragmentation/KeySetsContainer.hpp"
25#include "Fragmentation/SetValues/Histogram.hpp"
26#include "Fragmentation/SetValues/Fragment.hpp"
27#include "Fragmentation/SetValues/IndexedVectors.hpp"
28
29#include "Jobs/MPQCData.hpp"
30#include "Jobs/MPQCDataFused.hpp"
31#include "Jobs/MPQCDataMap.hpp"
32#ifdef HAVE_VMG
33#include "Jobs/VMGData.hpp"
34#include "Jobs/VMGDataFused.hpp"
35#include "Jobs/VMGDataMap.hpp"
36#endif
37
38template <typename source, typename dest>
39inline void convertDataTo(
[c9f9bb]40 const std::map<JobId_t, source> &fragmentData,
41 std::map<JobId_t, dest> &MPQCData_fused)
[0398bd]42{
43 MPQCData_fused.clear();
44}
45
46template <>
47inline void convertDataTo<MPQCData, MPQCDataEnergyMap_t>(
[c9f9bb]48 const std::map<JobId_t, MPQCData> &fragmentData,
49 std::map<JobId_t, MPQCDataEnergyMap_t> &MPQCData_Energy_fused)
[0398bd]50{
51 // energy_t
52 MPQCData_Energy_fused.clear();
[c9f9bb]53 for(std::map<JobId_t, MPQCData>::const_iterator dataiter = fragmentData.begin();
[0398bd]54 dataiter != fragmentData.end(); ++dataiter) {
[c9f9bb]55 const MPQCData &extractedData = dataiter->second;
[0398bd]56 LOG(4, "DEBUG: Current extracted Data is " << extractedData << ".");
57 MPQCDataEnergyMap_t instance;
58 boost::fusion::at_key<MPQCDataFused::energy_total>(instance) = extractedData.energies.total;
59 boost::fusion::at_key<MPQCDataFused::energy_nuclear_repulsion>(instance) = extractedData.energies.nuclear_repulsion;
60 boost::fusion::at_key<MPQCDataFused::energy_electron_coulomb>(instance) = extractedData.energies.electron_coulomb;
61 boost::fusion::at_key<MPQCDataFused::energy_electron_exchange>(instance) = extractedData.energies.electron_exchange;
62 boost::fusion::at_key<MPQCDataFused::energy_correlation>(instance) = extractedData.energies.correlation;
63 boost::fusion::at_key<MPQCDataFused::energy_overlap>(instance) = extractedData.energies.overlap;
64 boost::fusion::at_key<MPQCDataFused::energy_kinetic>(instance) = extractedData.energies.kinetic;
65 boost::fusion::at_key<MPQCDataFused::energy_hcore>(instance) = extractedData.energies.hcore;
66 boost::fusion::at_key<MPQCDataFused::energy_eigenvalues>(instance) = extractedData.energies.eigenvalues;
[c9f9bb]67 MPQCData_Energy_fused.insert( std::make_pair(dataiter->first, instance) );
[0398bd]68 }
69}
70
71#ifdef HAVE_VMG
72template <>
73inline void convertDataTo<VMGData, VMGDataMap_t>(
[c9f9bb]74 const std::map<JobId_t, VMGData> &longrangeData,
75 std::map<JobId_t, VMGDataMap_t> &VMGData_fused)
[0398bd]76{
77 // energy_t
78 VMGData_fused.clear();
[c9f9bb]79 for(std::map<JobId_t, VMGData>::const_iterator dataiter = longrangeData.begin();
[0398bd]80 dataiter != longrangeData.end(); ++dataiter) {
[c9f9bb]81 const VMGData &extractedData = dataiter->second;
[0398bd]82 LOG(4, "DEBUG: Current extracted Data is " << extractedData << ".");
83 VMGDataMap_t instance;
84 boost::fusion::at_key<VMGDataFused::sampled_potential>(instance) = extractedData.sampled_potential;
85 boost::fusion::at_key<VMGDataFused::energy_potential>(instance) = extractedData.sampled_potential.integral();
86 boost::fusion::at_key<VMGDataFused::energy_long>(instance) = extractedData.e_long;
[c9f9bb]87 VMGData_fused.insert( std::make_pair(dataiter->first, instance) );
[0398bd]88 }
89}
90#endif
91
92inline void convertMPQCDatatoForceMap(
[c9f9bb]93 const std::map<JobId_t, MPQCData> &fragmentData,
[0398bd]94 const KeySetsContainer &ForceKeySet,
[c9f9bb]95 std::map<JobId_t, MPQCDataForceMap_t> &MPQCData_Force_fused)
[0398bd]96{
97 // forces
98 ASSERT( ForceKeySet.KeySets.size() == fragmentData.size(),
99 "FragmentationAutomationAction::performCall() - indices and fragmentData differ in size.");
100 MPQCData_Force_fused.clear();
[c9f9bb]101 std::map<JobId_t, MPQCData>::const_iterator dataiter = fragmentData.begin();
[0398bd]102 KeySetsContainer::ArrayOfIntVectors::const_iterator arrayiter = ForceKeySet.KeySets.begin();
103 for(;dataiter != fragmentData.end(); ++dataiter, ++arrayiter) {
[c9f9bb]104 const MPQCData &extractedData = dataiter->second;
[0398bd]105 LOG(4, "DEBUG: Current extracted Data is " << extractedData << ".");
106 MPQCDataForceMap_t instance;
107 // must convert int to index_t
108 IndexedVectors::indices_t indices(arrayiter->begin(), arrayiter->end());
109 boost::fusion::at_key<MPQCDataFused::forces>(instance) =
110 IndexedVectors(indices, extractedData.forces);
[c9f9bb]111 MPQCData_Force_fused.insert( std::make_pair(dataiter->first, instance) );
[0398bd]112 }
113}
114
115template <>
116inline void convertDataTo<MPQCData, MPQCDataGridMap_t>(
[c9f9bb]117 const std::map<JobId_t, MPQCData> &fragmentData,
118 std::map<JobId_t, MPQCDataGridMap_t> &MPQCData_Grid_fused)
[0398bd]119{
120 // sampled_grid
121 MPQCData_Grid_fused.clear();
[c9f9bb]122 for(std::map<JobId_t, MPQCData>::const_iterator dataiter = fragmentData.begin();
[0398bd]123 dataiter != fragmentData.end(); ++dataiter) {
[c9f9bb]124 const MPQCData &extractedData = dataiter->second;
[0398bd]125 LOG(4, "DEBUG: Current extracted Data is " << extractedData << ".");
126 MPQCDataGridMap_t instance;
127 boost::fusion::at_key<MPQCDataFused::sampled_grid>(instance) = extractedData.sampled_grid;
[c9f9bb]128 MPQCData_Grid_fused.insert( std::make_pair(dataiter->first, instance) );
[0398bd]129 }
130}
131
132template <>
133inline void convertDataTo<MPQCData, MPQCDataFragmentMap_t>(
[c9f9bb]134 const std::map<JobId_t, MPQCData> &fragmentData,
135 std::map<JobId_t, MPQCDataFragmentMap_t> &MPQCData_Fragment_fused)
[0398bd]136{
137 // fragment
138 MPQCData_Fragment_fused.clear();
[c9f9bb]139 for(std::map<JobId_t, MPQCData>::const_iterator dataiter = fragmentData.begin();
[0398bd]140 dataiter != fragmentData.end(); ++dataiter) {
[c9f9bb]141 const MPQCData &extractedData = dataiter->second;
[0398bd]142 LOG(4, "DEBUG: Current extracted Data is " << extractedData << ".");
143 MPQCDataFragmentMap_t instance;
144 boost::fusion::at_key<MPQCDataFused::fragment>(instance) =
145 Fragment(extractedData.positions, extractedData.charges);
[c9f9bb]146 MPQCData_Fragment_fused.insert( std::make_pair(dataiter->first, instance) );
[0398bd]147 }
148}
149
150template <>
151inline void convertDataTo<MPQCData, MPQCDataTimeMap_t>(
[c9f9bb]152 const std::map<JobId_t, MPQCData> &fragmentData,
153 std::map<JobId_t, MPQCDataTimeMap_t> &MPQCData_Time_fused)
[0398bd]154{
155 // times
156 MPQCData_Time_fused.clear();
[c9f9bb]157 for(std::map<JobId_t, MPQCData>::const_iterator dataiter = fragmentData.begin();
[0398bd]158 dataiter != fragmentData.end(); ++dataiter) {
[c9f9bb]159 const MPQCData &extractedData = dataiter->second;
[0398bd]160 LOG(4, "DEBUG: Current extracted Data is " << extractedData << ".");
161 MPQCDataTimeMap_t instance;
[4aee30]162 boost::fusion::at_key<MPQCDataFused::times_total_walltime>(instance) = extractedData.times.total_walltime;
163 boost::fusion::at_key<MPQCDataFused::times_total_cputime>(instance) = extractedData.times.total_cputime;
164 boost::fusion::at_key<MPQCDataFused::times_total_flops>(instance) = extractedData.times.total_flops;
165 boost::fusion::at_key<MPQCDataFused::times_gather_walltime>(instance) = extractedData.times.gather_walltime;
166 boost::fusion::at_key<MPQCDataFused::times_gather_cputime>(instance) = extractedData.times.gather_cputime;
167 boost::fusion::at_key<MPQCDataFused::times_gather_flops>(instance) = extractedData.times.gather_flops;
[c9f9bb]168 MPQCData_Time_fused.insert( std::make_pair(dataiter->first, instance) );
[0398bd]169 }
170}
171
172
173#endif /* DATACONVERTER_HPP_ */
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