source: src/Formula.hpp@ 311137

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Last change on this file since 311137 was 47ed3d, checked in by Frederik Heber <heber@…>, 13 years ago

Removed some old output functions in element, Formula, and molecule.

  • This is preparatory for refactoring element into a more general concept that can contain both chemical and derived elements suitable for empirical potential parametrization storage.
  • Removed functions in element: Output(), Checkout().
  • Removed function Formula::checkOut().
  • Removed function molecule::Checkout().
  • functionality added to periodentafel::OutputElement().
  • Property mode set to 100644
File size: 4.0 KB
Line 
1/*
2 * Formula.hpp
3 *
4 * Created on: Jul 21, 2010
5 * Author: crueger
6 */
7
8#ifndef FORMULA_HPP_
9#define FORMULA_HPP_
10
11// include config.h
12#ifdef HAVE_CONFIG_H
13#include <config.h>
14#endif
15
16
17#include <vector>
18#include <iosfwd>
19#include <iterator>
20
21#include "types.hpp"
22
23#include "CodePatterns/enumeration.hpp"
24
25#include <exception>
26#include <boost/exception/all.hpp>
27
28/** ============================= Begin of Exceptions ===================== */
29
30/** Base class for all exceptions regarding Formula.
31 *
32 */
33struct FormulaException : virtual std::exception, virtual boost::exception { };
34
35/** Exception information for FormulaException: string.
36 */
37typedef boost::error_info<struct tag_FormulaString, const std::string> FormulaString;
38
39/** Exception thrown when a string cannot be parsed as a formula.
40 */
41struct FormulaStringParseException : virtual FormulaException { };
42
43/** ============================== end of Exceptions ====================== */
44
45class element;
46
47class Formula
48{
49public:
50 typedef const element* key_type;
51 typedef unsigned int mapped_type;
52 typedef std::pair<key_type, mapped_type> value_type;
53 typedef std::vector<unsigned int> set_t;
54
55 template <class result_type>
56 class _iterator : public std::iterator <std::bidirectional_iterator_tag,
57 result_type>
58 {
59 public:
60 _iterator(set_t&);
61 _iterator(set_t&,size_t);
62 _iterator(const _iterator &rhs);
63 ~_iterator();
64 _iterator &operator=(const _iterator &);
65 bool operator==(const _iterator&);
66 bool operator!=(const _iterator&);
67 _iterator operator++();
68 _iterator operator++(int);
69 _iterator operator--();
70 _iterator operator--(int);
71 result_type operator*();
72 result_type *operator->();
73 private:
74 set_t *set;
75 size_t pos; // cannot use an iterator, because we need a position to access the element
76 };
77
78 typedef _iterator<value_type> iterator;
79 typedef _iterator<const value_type> const_iterator;
80
81 Formula();
82 Formula(const std::string&);
83 Formula(const Formula&);
84 virtual ~Formula();
85
86 Formula &operator=(const Formula&);
87
88 std::string toString() const;
89 void fromString(const std::string&) throw(FormulaStringParseException);
90
91 unsigned int getElementCount() const;
92 bool hasElement(key_type) const;
93 bool hasElement(atomicNumber_t) const;
94 bool hasElement(const std::string&) const;
95
96 void operator+=(key_type);
97 void operator+=(atomicNumber_t);
98 void operator+=(const std::string&);
99
100 void operator-=(key_type);
101 void operator-=(atomicNumber_t);
102 void operator-=(const std::string&);
103
104 void addElements(key_type,unsigned int);
105 void addElements(atomicNumber_t,unsigned int);
106 void addElements(const std::string&,unsigned int);
107
108 void addFormula(const Formula&,unsigned int);
109
110 enumeration<key_type> enumerateElements() const;
111
112 // only const versions, because someone might try to increment a previously
113 // not set element
114 const unsigned int operator[](key_type) const;
115 const unsigned int operator[](atomicNumber_t) const;
116 const unsigned int operator[](std::string) const;
117
118 bool operator==(const Formula&) const;
119 bool operator!=(const Formula&) const;
120
121 iterator begin();
122 const_iterator begin() const;
123 iterator end();
124 const_iterator end() const;
125
126 void clear();
127
128private:
129 void parseFromString(std::string::const_iterator&,std::string::const_iterator&,char) throw(FormulaStringParseException);
130 int parseMaybeNumber(std::string::const_iterator &it,std::string::const_iterator &end) throw(FormulaStringParseException);
131 // this contains all counts of elements in the formula
132 // the size of the actual structure might be used in comparisons
133 // so be sure not to keep any zero elements at the end
134 // e.g. {5;4;0;0;0;2;1} or {0;1;0;0;2} are ok, but {1;2;3;0;0;0} is bad
135 set_t elementCounts;
136 unsigned int numElements;
137};
138
139std::ostream &operator<<(std::ostream&,const Formula&);
140
141#endif /* FORMULA_HPP_ */
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