Action_Thermostats
Add_AtomRandomPerturbation
Add_FitFragmentPartialChargesAction
Add_RotateAroundBondAction
Add_SelectAtomByNameAction
Added_ParseSaveFragmentResults
AddingActions_SaveParseParticleParameters
Adding_Graph_to_ChangeBondActions
Adding_MD_integration_tests
Adding_ParticleName_to_Atom
Adding_StructOpt_integration_tests
AtomFragments
Automaking_mpqc_open
AutomationFragmentation_failures
Candidate_v1.5.4
Candidate_v1.6.0
Candidate_v1.6.1
ChangeBugEmailaddress
ChangingTestPorts
ChemicalSpaceEvaluator
CombiningParticlePotentialParsing
Combining_Subpackages
Debian_Package_split
Debian_package_split_molecuildergui_only
Disabling_MemDebug
Docu_Python_wait
EmpiricalPotential_contain_HomologyGraph
EmpiricalPotential_contain_HomologyGraph_documentation
Enable_parallel_make_install
Enhance_userguide
Enhanced_StructuralOptimization
Enhanced_StructuralOptimization_continued
Example_ManyWaysToTranslateAtom
Exclude_Hydrogens_annealWithBondGraph
FitPartialCharges_GlobalError
Fix_BoundInBox_CenterInBox_MoleculeActions
Fix_ChargeSampling_PBC
Fix_ChronosMutex
Fix_FitPartialCharges
Fix_FitPotential_needs_atomicnumbers
Fix_ForceAnnealing
Fix_IndependentFragmentGrids
Fix_ParseParticles
Fix_ParseParticles_split_forward_backward_Actions
Fix_PopActions
Fix_QtFragmentList_sorted_selection
Fix_Restrictedkeyset_FragmentMolecule
Fix_StatusMsg
Fix_StepWorldTime_single_argument
Fix_Verbose_Codepatterns
Fix_fitting_potentials
Fixes
ForceAnnealing_goodresults
ForceAnnealing_oldresults
ForceAnnealing_tocheck
ForceAnnealing_with_BondGraph
ForceAnnealing_with_BondGraph_continued
ForceAnnealing_with_BondGraph_continued_betteresults
ForceAnnealing_with_BondGraph_contraction-expansion
FragmentAction_writes_AtomFragments
FragmentMolecule_checks_bonddegrees
GeometryObjects
Gui_Fixes
Gui_displays_atomic_force_velocity
ImplicitCharges
IndependentFragmentGrids
IndependentFragmentGrids_IndividualZeroInstances
IndependentFragmentGrids_IntegrationTest
IndependentFragmentGrids_Sole_NN_Calculation
JobMarket_RobustOnKillsSegFaults
JobMarket_StableWorkerPool
JobMarket_unresolvable_hostname_fix
MoreRobust_FragmentAutomation
ODR_violation_mpqc_open
PartialCharges_OrthogonalSummation
PdbParser_setsAtomName
PythonUI_with_named_parameters
QtGui_reactivate_TimeChanged_changes
Recreated_GuiChecks
Rewrite_FitPartialCharges
RotateToPrincipalAxisSystem_UndoRedo
SaturateAtoms_findBestMatching
SaturateAtoms_singleDegree
StoppableMakroAction
Subpackage_CodePatterns
Subpackage_JobMarket
Subpackage_LinearAlgebra
Subpackage_levmar
Subpackage_mpqc_open
Subpackage_vmg
Switchable_LogView
ThirdParty_MPQC_rebuilt_buildsystem
TrajectoryDependenant_MaxOrder
TremoloParser_IncreasedPrecision
TremoloParser_MultipleTimesteps
TremoloParser_setsAtomName
Ubuntu_1604_changes
stable
Rev | Line | |
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[57adc7] | 1 | /*
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| 2 | * MoleculeIdDescriptor.cpp
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| 3 | *
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| 4 | * Created on: Feb 5, 2010
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| 5 | * Author: crueger
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| 6 | */
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| 7 |
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[112b09] | 8 | #include "Helpers/MemDebug.hpp"
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| 9 |
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[57adc7] | 10 | #include "MoleculeIdDescriptor.hpp"
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| 11 | #include "MoleculeIdDescriptor_impl.hpp"
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| 12 |
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[51be2a] | 13 | #include "Patterns/ObservedContainer_impl.hpp"
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| 14 |
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[57adc7] | 15 | #include "molecule.hpp"
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| 16 |
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| 17 | using namespace std;
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| 18 |
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| 19 |
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| 20 | MoleculeIdDescriptor_impl::MoleculeIdDescriptor_impl(moleculeId_t _id) :
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| 21 | id(_id)
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| 22 | {}
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| 23 |
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| 24 | MoleculeIdDescriptor_impl::~MoleculeIdDescriptor_impl()
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| 25 | {}
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| 26 |
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| 27 | bool MoleculeIdDescriptor_impl::predicate(std::pair<moleculeId_t,molecule*> molecule) {
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| 28 | return molecule.first==id;
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| 29 | }
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| 30 |
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| 31 | MoleculeDescriptor MoleculeById(moleculeId_t id){
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| 32 | return MoleculeDescriptor(MoleculeDescriptor::impl_ptr(new MoleculeIdDescriptor_impl(id)));
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| 33 | }
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| 34 |
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| 35 | molecule *MoleculeIdDescriptor_impl::find(){
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[41aa39] | 36 | World::MoleculeSet &molecules = getMolecules();
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[57adc7] | 37 | World::MoleculeSet::iterator res = molecules.find(id);
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| 38 | return (res!=molecules.end())?((*res).second):0;
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| 39 | }
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| 40 |
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| 41 | vector<molecule*> MoleculeIdDescriptor_impl::findAll(){
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| 42 | molecule *res = find();
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| 43 | return (res)?(vector<molecule*>(1,res)):(vector<molecule*>());
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| 44 | }
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