[1c51c8] | 1 | /*
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| 2 | * MoleculeDescriptor.cpp
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| 3 | *
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| 4 | * Created on: Feb 5, 2010
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| 5 | * Author: crueger
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| 6 | */
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| 7 |
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[112b09] | 8 | #include "Helpers/MemDebug.hpp"
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| 9 |
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[1c51c8] | 10 | #include "Descriptors/MoleculeDescriptor.hpp"
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| 11 | #include "Descriptors/MoleculeDescriptor_impl.hpp"
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| 12 |
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| 13 | #include "World.hpp"
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| 14 |
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| 15 | #include "molecule.hpp"
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| 16 |
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| 17 | #include <boost/bind.hpp>
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| 18 | #include <cassert>
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| 19 | #include <iostream>
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| 20 |
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| 21 | using namespace std;
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| 22 |
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| 23 | typedef World::MoleculeSet::iterator molecules_iter_t;
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| 24 |
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| 25 | /************************ Forwarding object **************************************/
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| 26 |
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| 27 |
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| 28 | MoleculeDescriptor::MoleculeDescriptor(impl_ptr _impl) :
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| 29 | impl(_impl)
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| 30 | {}
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| 31 |
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| 32 | MoleculeDescriptor::MoleculeDescriptor(const MoleculeDescriptor& src) :
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| 33 | impl(src.get_impl())
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| 34 | {}
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| 35 |
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| 36 | MoleculeDescriptor::~MoleculeDescriptor()
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| 37 | {}
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| 38 |
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| 39 | MoleculeDescriptor& MoleculeDescriptor::operator=(MoleculeDescriptor &src){
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| 40 | if(&src!=this) {
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| 41 | impl=src.get_impl();
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| 42 | }
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| 43 | return *this;
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| 44 | }
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| 45 |
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| 46 | molecule* MoleculeDescriptor::find(){
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| 47 | return impl->find();
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| 48 | }
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| 49 |
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| 50 | std::vector<molecule*> MoleculeDescriptor::findAll(){
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| 51 | return impl->findAll();
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| 52 | }
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| 53 |
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| 54 | MoleculeDescriptor::impl_ptr MoleculeDescriptor::get_impl() const{
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| 55 | return impl;
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| 56 | }
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| 57 |
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| 58 |
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| 59 |
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| 60 |
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| 61 | /**************************** implementation ********************/
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| 62 |
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| 63 | MoleculeDescriptor_impl::MoleculeDescriptor_impl()
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| 64 | {
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| 65 | }
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| 66 |
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| 67 | MoleculeDescriptor_impl::~MoleculeDescriptor_impl()
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| 68 | {
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| 69 | }
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| 70 |
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| 71 | World::MoleculeSet& MoleculeDescriptor_impl::getMolecules(){
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[23b547] | 72 | return World::getInstance().molecules;
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[1c51c8] | 73 | }
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| 74 |
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| 75 | molecule* MoleculeDescriptor_impl::find() {
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| 76 | World::MoleculeSet molecules = getMolecules();
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| 77 | molecules_iter_t res = find_if(molecules.begin(),molecules.end(),boost::bind(&MoleculeDescriptor_impl::predicate,this,_1));
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| 78 | return (res!=molecules.end())?((*res).second):0;
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| 79 | }
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| 80 |
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| 81 | vector<molecule*> MoleculeDescriptor_impl::findAll() {
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| 82 | vector<molecule*> res;
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| 83 | World::MoleculeSet molecules = getMolecules();
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| 84 | molecules_iter_t iter;
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| 85 | for(iter=molecules.begin();iter!=molecules.end();++iter) {
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| 86 | if(predicate(*iter)){
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| 87 | res.push_back((*iter).second);
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| 88 | }
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| 89 | }
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| 90 | return res;
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| 91 | }
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| 92 |
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| 93 | /************************** Universe and Emptyset *****************/
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| 94 |
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| 95 | MoleculeAllDescriptor_impl::MoleculeAllDescriptor_impl()
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| 96 | {}
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| 97 |
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| 98 | MoleculeAllDescriptor_impl::~MoleculeAllDescriptor_impl()
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| 99 | {}
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| 100 |
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| 101 | bool MoleculeAllDescriptor_impl::predicate(std::pair<moleculeId_t,molecule*>){
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| 102 | return true;
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| 103 | }
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| 104 |
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| 105 | MoleculeDescriptor AllMolecules(){
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| 106 | return MoleculeDescriptor(MoleculeDescriptor::impl_ptr(new MoleculeAllDescriptor_impl));
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| 107 | }
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| 108 |
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| 109 | MoleculeNoneDescriptor_impl::MoleculeNoneDescriptor_impl()
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| 110 | {}
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| 111 |
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| 112 | MoleculeNoneDescriptor_impl::~MoleculeNoneDescriptor_impl()
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| 113 | {}
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| 114 |
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| 115 | bool MoleculeNoneDescriptor_impl::predicate(std::pair<moleculeId_t,molecule*>){
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| 116 | return false;
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| 117 | }
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| 118 |
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| 119 | MoleculeDescriptor NoMolecules(){
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| 120 | return MoleculeDescriptor(MoleculeDescriptor::impl_ptr(new MoleculeNoneDescriptor_impl));
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| 121 | }
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| 122 |
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| 123 | /************************** Operator stuff ************************/
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| 124 |
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| 125 | // AND
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| 126 | MoleculeAndDescriptor_impl::MoleculeAndDescriptor_impl(MoleculeDescriptor::impl_ptr _lhs, MoleculeDescriptor::impl_ptr _rhs) :
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| 127 | lhs(_lhs), rhs(_rhs)
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| 128 | {}
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| 129 |
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| 130 | MoleculeAndDescriptor_impl::~MoleculeAndDescriptor_impl()
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| 131 | {}
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| 132 |
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| 133 | bool MoleculeAndDescriptor_impl::predicate(std::pair<moleculeId_t,molecule*> molecule){
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| 134 | return lhs->predicate(molecule) && rhs->predicate(molecule);
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| 135 | }
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| 136 | MoleculeDescriptor operator&&(const MoleculeDescriptor &lhs, const MoleculeDescriptor &rhs){
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| 137 | MoleculeDescriptor::impl_ptr newImpl = MoleculeDescriptor::impl_ptr(new MoleculeAndDescriptor_impl(lhs.get_impl(),rhs.get_impl()));
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| 138 | return MoleculeDescriptor(newImpl);
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| 139 | }
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| 140 |
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| 141 | // OR
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| 142 | MoleculeOrDescriptor_impl::MoleculeOrDescriptor_impl(MoleculeDescriptor::impl_ptr _lhs ,MoleculeDescriptor::impl_ptr _rhs) :
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| 143 | lhs(_lhs), rhs(_rhs)
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| 144 | {}
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| 145 |
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| 146 | MoleculeOrDescriptor_impl::~MoleculeOrDescriptor_impl(){
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| 147 | }
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| 148 |
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| 149 | bool MoleculeOrDescriptor_impl::predicate(std::pair<moleculeId_t,molecule*> molecule){
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| 150 | return lhs->predicate(molecule) || rhs->predicate(molecule);
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| 151 | }
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| 152 |
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| 153 | MoleculeDescriptor operator||(const MoleculeDescriptor &lhs, const MoleculeDescriptor &rhs){
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| 154 | MoleculeDescriptor::impl_ptr newImpl = MoleculeDescriptor::impl_ptr(new MoleculeOrDescriptor_impl(lhs.get_impl(),rhs.get_impl()));
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| 155 | return MoleculeDescriptor(newImpl);
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| 156 | }
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| 157 |
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| 158 | // NOT
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| 159 |
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| 160 | MoleculeNotDescriptor_impl::MoleculeNotDescriptor_impl(MoleculeDescriptor::impl_ptr _arg) :
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| 161 | arg(_arg)
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| 162 | {}
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| 163 |
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| 164 |
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| 165 | MoleculeNotDescriptor_impl::~MoleculeNotDescriptor_impl()
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| 166 | {
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| 167 | }
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| 168 |
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| 169 | bool MoleculeNotDescriptor_impl::predicate(std::pair<moleculeId_t,molecule*> molecule){
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| 170 | return !(arg->predicate(molecule));
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| 171 | }
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| 172 |
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| 173 | MoleculeDescriptor operator!(const MoleculeDescriptor &arg){
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| 174 | MoleculeDescriptor::impl_ptr newImpl = MoleculeDescriptor::impl_ptr(new MoleculeNotDescriptor_impl(arg.get_impl()));
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| 175 | return MoleculeDescriptor(newImpl);
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| 176 | }
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