source: src/Box.hpp@ 311137

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Last change on this file since 311137 was 2a0271, checked in by Frederik Heber <heber@…>, 13 years ago

New function Box::isValid() to be discerned from ::isInside().

  • isValid checks with and isInside without boundary conditions.
  • added Box::isValid() check to LinkedCell_Model::getIndexToVector().
  • TESTFIX: regression test Atoms/Add needed Ignore BCs.
  • Property mode set to 100644
File size: 4.5 KB
Line 
1/*
2 * Box.hpp
3 *
4 * Created on: Jun 30, 2010
5 * Author: crueger
6 */
7
8#ifndef BOX_HPP_
9#define BOX_HPP_
10
11// include config.h
12#ifdef HAVE_CONFIG_H
13#include <config.h>
14#endif
15
16
17class RealSpaceMatrix;
18class Vector;
19class Shape;
20class Plane;
21
22#include <list>
23#include <vector>
24#include "CodePatterns/Observer/Observable.hpp"
25#include "LinearAlgebra/VectorSet.hpp"
26
27#include "Box_BoundaryConditions.hpp"
28
29/**
30 * A simple class that can be used to store periodic Boxes
31 * in the form of a parallelepiped.
32 *
33 * Stores a matrix that can be used to translate from periodic
34 * [0,1) space as well as the inverse that is needed to
35 * translate back to that space.
36 */
37class Box : public Observable
38{
39public:
40 enum NotificationType {
41 BoundaryConditionsChanged,
42 MatrixChanged,
43 NotificationType_MAX // denotes the maximum of available notification types
44 };
45
46 Box();
47 Box(const Box&);
48 Box(RealSpaceMatrix _M);
49 virtual ~Box();
50
51 /**
52 * Get the matrix describing the form of the parallelepiped
53 */
54 const RealSpaceMatrix &getM() const;
55
56 /**
57 * Get the inverse of the matrix M (see above).
58 */
59 const RealSpaceMatrix &getMinv() const;
60
61 /**
62 * Set the form of the parallelepiped.
63 */
64 void setM(RealSpaceMatrix);
65
66 Box &operator=(const Box&);
67 Box &operator=(const RealSpaceMatrix&);
68
69 /**
70 * Translate a point from [0,1) to the boxed space.
71 */
72 Vector translateIn(const Vector &point) const;
73
74 /**
75 * Translate a point from the boxed space to the [0,1) space.
76 */
77 Vector translateOut(const Vector &point) const;
78
79 /**
80 * Wrap a point so that it will lie within the space defined by the box.
81 */
82 Vector enforceBoundaryConditions(const Vector &point) const;
83
84 /**
85 * Checks whether a given vector is inside the box not accounting for boundary conditions.
86 */
87 bool isInside(const Vector &point) const;
88
89 /**
90 * Checks whether a given vector is inside the box under the given boundary conditions.
91 */
92 bool isValid(const Vector &point) const;
93
94
95 /**
96 * Produce corresponding points in several adjacent boxes.
97 *
98 * n specifies the number of times the point is expanded.
99 * Carefull, needs O(n^3) time and produces as many vectors.
100 */
101 VECTORSET(std::vector) explode(const Vector &point,int n) const;
102 VECTORSET(std::vector) explode(const Vector &point) const;
103
104 /**
105 * Calculate the distance vector of two points in the periodic space
106 * defined by this box
107 */
108 const Vector periodicDistanceVector(const Vector &point1,const Vector &point2) const;
109
110 /**
111 * Calculate the distance of two points in the periodic space
112 * defined by this box
113 */
114 double periodicDistanceSquared(const Vector &point1,const Vector &point2) const;
115
116 /**
117 * Calculate the distance of two points in the periodic space
118 * defined by this box
119 */
120 double periodicDistance(const Vector &point1,const Vector &point2) const;
121
122 /**
123 * Calculates the minimum distance to the boundary of the periodic
124 * space defined by this box.
125 */
126 double DistanceToBoundary(const Vector &point) const;
127
128 Shape getShape() const;
129
130 const std::string getConditionNames() const;
131 const BoundaryConditions::Conditions_t & getConditions() const;
132 const BoundaryConditions::BoundaryCondition_t getCondition(size_t i) const;
133 void setCondition(size_t i,const BoundaryConditions::BoundaryCondition_t _condition);
134 void setConditions(const BoundaryConditions::Conditions_t & _conditions);
135 void setConditions(const std::string & _conditions);
136
137 const std::vector<std::pair<Plane,Plane> > getBoundingPlanes() const;
138
139 void setCuboid(const Vector&);
140
141private:
142 /** Internal explode function that works on the staticly present internal_list
143 *
144 * \todo Note that is not thread-safe!
145 *
146 * Most of the time of explode is consumed by memory allocation if it is called
147 * repeatedly.
148 *
149 * @param point point to explode
150 * @param n neighbour shells to explode
151 */
152 void internal_explode(const Vector &point,int n) const;
153
154
155 //!> Internal vector list for exploding vectors used in Box::internal_explode().
156 mutable VECTORSET(std::vector) internal_list;
157
158 //!> Internal vector for coordinates used in Box::internal_explode()
159 mutable std::vector<int> coords;
160 //!> Internal vector for indices used in Box::internal_explode()
161 mutable std::vector<int> index;
162
163 BoundaryConditions::BCContainer conditions;
164 RealSpaceMatrix *M; //!< Defines the layout of the box
165 RealSpaceMatrix *Minv; //!< Inverse of M to avoid recomputation
166};
167
168std::ostream & operator << (std::ostream& ost, const Box &m);
169
170#endif /* BOX_HPP_ */
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