| 1 | /*
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| 2 | * Project: MoleCuilder
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| 3 | * Description: creates and alters molecular systems
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| 4 | * Copyright (C) 2010 University of Bonn. All rights reserved.
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| 5 | * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
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| 6 | */
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| 7 |
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| 8 | /*
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| 9 | * pyMoleCuilder.cpp
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| 10 | *
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| 11 | * Created on: Sep 21, 2011
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| 12 | * Author: heber
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| 13 | */
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| 14 |
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| 15 | // include config.h
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| 16 | #ifdef HAVE_CONFIG_H
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| 17 | #include <config.h>
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| 18 | #endif
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| 19 |
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| 20 | #include <boost/python.hpp>
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| 21 | #include <boost/python/module.hpp>
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| 22 | #include <boost/python/args.hpp>
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| 23 |
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| 24 | #include "CodePatterns/MemDebug.hpp"
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| 25 |
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| 26 | //!> define all present actions
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| 27 | #include "GlobalListOfActions.hpp"
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| 28 |
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| 29 | //!> python wrapping for all of these actions
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| 30 | #include "AllActionPython.hpp"
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| 31 |
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| 32 | #include "cleanUp.hpp"
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| 33 | #include "Actions/ActionHistory.hpp"
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| 34 | #include "cleanUp.hpp"
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| 35 |
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| 36 | namespace MoleCuilder {
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| 37 |
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| 38 | namespace detail {
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| 39 |
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| 40 | void module_exit()
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| 41 | {
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| 42 | // save everything
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| 43 | std::cout << "Saving." << std::endl;
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| 44 | saveAll();
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| 45 | // purge everything
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| 46 | std::cout << "Cleaning memory." << std::endl;
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| 47 | cleanUp();
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| 48 | }
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| 49 |
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| 50 | void module_reinit()
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| 51 | {
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| 52 | // save everything
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| 53 | std::cout << "Saving." << std::endl;
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| 54 | saveAll();
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| 55 | // purge everything
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| 56 | std::cout << "Cleaning static instances from memory." << std::endl;
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| 57 | purgeStaticInstances();
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| 58 | // need to init the history before any action is created
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| 59 | std::cout << "Reinitializing." << std::endl;
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| 60 | MoleCuilder::ActionHistory::init();
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| 61 | }
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| 62 |
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| 63 | } /* namespace MoleCuilder */
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| 64 | } /* namespace detail */
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| 65 |
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| 66 | BOOST_PYTHON_MODULE(pyMoleCuilder)
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| 67 | {
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| 68 | // need to init the history before any action is created
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| 69 | MoleCuilder::ActionHistory::init();
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| 70 |
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| 71 | // from this moment on, we need to be sure to deeinitialize in the correct order
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| 72 | // this is handled by the cleanup function
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| 73 | atexit(MoleCuilder::detail::module_exit);
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| 74 |
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| 75 | // set the docstring of the current module scope
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| 76 | boost::python::scope().attr("__doc__") = "pyMolecuilder are the python bindings to all Actions of the program suite MoleCuilder.\n\nMoleCuilder is a program to build molecular (dynamics) worlds, allowing you indefinite manipulation, control and analysis over the atoms and molecules within a simulation domain.";
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| 77 |
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| 78 | boost::python::def("reinit", MoleCuilder::detail::module_reinit, "Reinitializes the internal state of the python module as if it had been freshly imported, saves all input files beforehand.");
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| 79 | #define export_print(z,n,list) \
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| 80 | BOOST_PP_CAT(export_, BOOST_PP_SEQ_ELEM(n, list))();
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| 81 | #define BOOST_PP_LOCAL_MACRO(n) export_print(~, n, GLOBALLISTOFACTIONS)
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| 82 | #define BOOST_PP_LOCAL_LIMITS (0, BOOST_PP_DEC(BOOST_PP_SEQ_SIZE(GLOBALLISTOFACTIONS)))
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| 83 | #include BOOST_PP_LOCAL_ITERATE()
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| 84 | #undef instance_print
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| 85 | }
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