1 | /*
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2 | * Project: MoleCuilder
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3 | * Description: creates and alters molecular systems
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4 | * Copyright (C) 2010 University of Bonn. All rights reserved.
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5 | * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
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6 | */
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7 |
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8 | /*
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9 | * AddEmptyBoundaryAction.cpp
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10 | *
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11 | * Created on: May 8, 2010
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12 | * Author: heber
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13 | */
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14 |
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15 | // include config.h
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16 | #ifdef HAVE_CONFIG_H
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17 | #include <config.h>
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18 | #endif
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19 |
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20 | #include "CodePatterns/MemDebug.hpp"
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21 |
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22 | #include "atom.hpp"
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23 | #include "CodePatterns/Log.hpp"
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24 | #include "LinearAlgebra/RealSpaceMatrix.hpp"
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25 | #include "LinearAlgebra/Vector.hpp"
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26 | #include "World.hpp"
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27 |
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28 | #include <iostream>
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29 | #include <string>
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30 | #include <vector>
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31 |
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32 | #include "Actions/WorldAction/AddEmptyBoundaryAction.hpp"
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33 |
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34 | using namespace MoleCuilder;
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35 |
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36 | // and construct the stuff
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37 | #include "AddEmptyBoundaryAction.def"
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38 | #include "Action_impl_pre.hpp"
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39 | /** =========== define the function ====================== */
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40 | Action::state_ptr WorldAddEmptyBoundaryAction::performCall() {
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41 | Vector Min;
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42 | Vector Max;
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43 | int j=0;
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44 |
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45 | // obtain information
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46 | getParametersfromValueStorage();
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47 |
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48 | // get maximum and minimum
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49 | vector<atom *> AllAtoms = World::getInstance().getAllAtoms();
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50 | ASSERT(AllAtoms.size() > 0, "There must be atoms present for AddingEmptyBoundary.");
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51 | vector<atom *>::iterator AtomRunner = AllAtoms.begin();
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52 | Min = (*AtomRunner)->getPosition();
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53 | Max = (*AtomRunner)->getPosition();
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54 | for (; AtomRunner != AllAtoms.end(); ++AtomRunner) {
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55 | for (int i=0;i<NDIM;i++) {
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56 | if ((*AtomRunner)->at(i) > Max[i])
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57 | Max[i] = (*AtomRunner)->at(i);
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58 | if ((*AtomRunner)->at(i) < Min[i])
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59 | Min[i] = (*AtomRunner)->at(i);
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60 | }
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61 | }
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62 | // set new box size
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63 | double * const cell_size = new double[6];
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64 | for (j=0;j<6;j++)
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65 | cell_size[j] = 0.;
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66 | j=-1;
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67 | for (int i=0;i<NDIM;i++) {
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68 | j += i+1;
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69 | cell_size[j] = (Max[i]-Min[i]+2.*params.boundary[i]);
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70 | }
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71 | World::getInstance().setDomain(cell_size);
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72 | delete[] cell_size;
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73 | // translate all atoms, such that Min is aty (0,0,0)
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74 | AtomRunner = AllAtoms.begin();
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75 | for (; AtomRunner != AllAtoms.end(); ++AtomRunner)
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76 | *(*AtomRunner) -= Min - params.boundary;
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77 |
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78 | // give final box size
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79 | LOG(0, "Box domain is now " << World::getInstance().getDomain().getM());
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80 |
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81 | return Action::success;
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82 | }
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83 |
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84 | Action::state_ptr WorldAddEmptyBoundaryAction::performUndo(Action::state_ptr _state) {
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85 | // ParserLoadXyzState *state = assert_cast<ParserLoadXyzState*>(_state.get());
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86 |
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87 | return Action::failure;
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88 | // string newName = state->mol->getName();
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89 | // state->mol->setName(state->lastName);
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90 | //
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91 | // return Action::state_ptr(new ParserLoadXyzState(state->mol,newName));
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92 | }
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93 |
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94 | Action::state_ptr WorldAddEmptyBoundaryAction::performRedo(Action::state_ptr _state){
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95 | return Action::failure;
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96 | }
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97 |
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98 | bool WorldAddEmptyBoundaryAction::canUndo() {
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99 | return false;
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100 | }
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101 |
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102 | bool WorldAddEmptyBoundaryAction::shouldUndo() {
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103 | return false;
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104 | }
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105 | /** =========== end of function ====================== */
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