[bcf653] | 1 | /*
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| 2 | * Project: MoleCuilder
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| 3 | * Description: creates and alters molecular systems
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[0aa122] | 4 | * Copyright (C) 2010-2012 University of Bonn. All rights reserved.
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[bcf653] | 5 | * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
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| 6 | */
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| 7 |
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[97ebf8] | 8 | /*
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| 9 | * ConvexEnvelopeAction.cpp
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| 10 | *
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| 11 | * Created on: May 12, 2010
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| 12 | * Author: heber
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| 13 | */
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| 14 |
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[bf3817] | 15 | // include config.h
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| 16 | #ifdef HAVE_CONFIG_H
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| 17 | #include <config.h>
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| 18 | #endif
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| 19 |
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[ad011c] | 20 | #include "CodePatterns/MemDebug.hpp"
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[112b09] | 21 |
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[34c43a] | 22 | #include "CodePatterns/Log.hpp"
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[628b52] | 23 | #include "config.hpp"
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[53c7fc] | 24 | #include "LinkedCell/linkedcell.hpp"
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| 25 | #include "LinkedCell/PointCloudAdaptor.hpp"
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[628b52] | 26 | #include "molecule.hpp"
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[53c7fc] | 27 | #include "Tesselation/boundary.hpp"
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[d127c8] | 28 | #include "Tesselation/tesselation.hpp"
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[628b52] | 29 | #include "World.hpp"
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[97ebf8] | 30 |
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| 31 | #include <iostream>
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| 32 | #include <string>
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| 33 |
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[1fd675] | 34 | #include "Actions/TesselationAction/ConvexEnvelopeAction.hpp"
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[8ae5d5] | 35 |
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[ce7fdc] | 36 | using namespace MoleCuilder;
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| 37 |
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[1fd675] | 38 | // and construct the stuff
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| 39 | #include "ConvexEnvelopeAction.def"
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| 40 | #include "Action_impl_pre.hpp"
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| 41 | /** =========== define the function ====================== */
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[97ebf8] | 42 | Action::state_ptr TesselationConvexEnvelopeAction::performCall() {
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| 43 | molecule * mol = NULL;
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[8ae5d5] | 44 | bool Success = true;
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[f6bd32] | 45 | config *configuration = World::getInstance().getConfig();
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[97ebf8] | 46 |
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[8ae5d5] | 47 | for (World::MoleculeSelectionIterator iter = World::getInstance().beginMoleculeSelection(); iter != World::getInstance().endMoleculeSelection(); ++iter) {
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| 48 | mol = iter->second;
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[97ebf8] | 49 | class Tesselation *TesselStruct = NULL;
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[6bd7e0] | 50 | const LinkedCell_deprecated *LCList = NULL;
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[47d041] | 51 | LOG(0, "Evaluating volume of the convex envelope.");
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[f10b0c] | 52 | LOG(1, "Storing tecplot convex data in " << params.filenameConvex.get() << ".");
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| 53 | LOG(1, "Storing tecplot non-convex data in " << params.filenameNonConvex.get() << ".");
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[caa06ef] | 54 | PointCloudAdaptor<molecule> cloud(mol, mol->name);
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[6bd7e0] | 55 | LCList = new LinkedCell_deprecated(cloud, 100.);
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[25b9d2] | 56 | //Boundaries *BoundaryPoints = NULL;
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[bdc91e] | 57 | //FindConvexBorder(mol, BoundaryPoints, TesselStruct, LCList, argv[argptr]);
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[97ebf8] | 58 | // TODO: Beide Funktionen sollten streams anstelle des Filenamen benutzen, besser fuer unit tests
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[f10b0c] | 59 | FindNonConvexBorder(mol, TesselStruct, LCList, 50., params.filenameNonConvex.get().string().c_str());
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[97ebf8] | 60 | //RemoveAllBoundaryPoints(TesselStruct, mol, argv[argptr]);
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[f10b0c] | 61 | const double volumedifference = ConvexizeNonconvexEnvelope(TesselStruct, mol, params.filenameConvex.get().string().c_str());
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[ee0032] | 62 | const double clustervolume = TesselStruct->getVolumeOfConvexEnvelope(configuration->GetIsAngstroem());
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[47d041] | 63 | LOG(0, "The tesselated volume area is " << clustervolume << " " << (configuration->GetIsAngstroem() ? "angstrom" : "atomiclength") << "^3.");
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| 64 | LOG(0, "The non-convex tesselated volume area is " << clustervolume-volumedifference << " " << (configuration->GetIsAngstroem() ? "angstrom" : "atomiclength") << "^3.");
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[97ebf8] | 65 | delete(TesselStruct);
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| 66 | delete(LCList);
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| 67 | }
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[8ae5d5] | 68 | if (Success)
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| 69 | return Action::success;
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| 70 | else
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| 71 | return Action::failure;
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[97ebf8] | 72 | }
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| 73 |
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| 74 | Action::state_ptr TesselationConvexEnvelopeAction::performUndo(Action::state_ptr _state) {
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| 75 | // TesselationConvexEnvelopeState *state = assert_cast<TesselationConvexEnvelopeState*>(_state.get());
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| 76 |
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| 77 | // string newName = state->mol->getName();
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| 78 | // state->mol->setName(state->lastName);
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| 79 |
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| 80 | return Action::failure;
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| 81 | }
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| 82 |
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| 83 | Action::state_ptr TesselationConvexEnvelopeAction::performRedo(Action::state_ptr _state){
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| 84 | // Undo and redo have to do the same for this action
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| 85 | return performUndo(_state);
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| 86 | }
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| 87 |
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| 88 | bool TesselationConvexEnvelopeAction::canUndo() {
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| 89 | return false;
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| 90 | }
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| 91 |
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| 92 | bool TesselationConvexEnvelopeAction::shouldUndo() {
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| 93 | return false;
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| 94 | }
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[1fd675] | 95 | /** =========== end of function ====================== */
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