source: src/Actions/MoleculeAction/SaveBondsAction.cpp@ ce7fdc

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Last change on this file since ce7fdc was ce7fdc, checked in by Frederik Heber <heber@…>, 13 years ago

HUGE: All Action-related codes resides now in namespace MoleCuilder.

  • removed all namespace std in Actions..., replaced by MoleCuilder.
  • Property mode set to 100644
File size: 2.2 KB
Line 
1/*
2 * Project: MoleCuilder
3 * Description: creates and alters molecular systems
4 * Copyright (C) 2010 University of Bonn. All rights reserved.
5 * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
6 */
7
8/*
9 * SaveBondsAction.cpp
10 *
11 * Created on: May 10, 2010
12 * Author: heber
13 */
14
15// include config.h
16#ifdef HAVE_CONFIG_H
17#include <config.h>
18#endif
19
20#include "CodePatterns/MemDebug.hpp"
21
22#include "Graph/BondGraph.hpp"
23#include "config.hpp"
24#include "CodePatterns/Log.hpp"
25#include "molecule.hpp"
26#include "CodePatterns/Verbose.hpp"
27#include "World.hpp"
28
29#include <iostream>
30#include <fstream>
31#include <string>
32
33#include "Actions/MoleculeAction/SaveBondsAction.hpp"
34
35using namespace MoleCuilder;
36
37// and construct the stuff
38#include "SaveBondsAction.def"
39#include "Action_impl_pre.hpp"
40/** =========== define the function ====================== */
41Action::state_ptr MoleculeSaveBondsAction::performCall() {
42 molecule *mol = NULL;
43
44 // obtain information
45 getParametersfromValueStorage();
46
47 for (World::MoleculeSelectionIterator iter = World::getInstance().beginMoleculeSelection(); iter != World::getInstance().endMoleculeSelection(); ++iter) {
48 mol = iter->second;
49 DoLog(0) && (Log() << Verbose(0) << "Storing bonds to path " << params.bondsfile << "." << endl);
50 // TODO: sollte stream, nicht filenamen direkt nutzen, besser fuer unit tests
51#if BOOST_VERSION >= 104600
52 mol->StoreBondsToFile(params.bondsfile.leaf().string(), params.bondsfile.branch_path().string());
53#else
54 mol->StoreBondsToFile(params.bondsfile.leaf(), params.bondsfile.branch_path().string());
55#endif
56 }
57 return Action::success;
58}
59
60Action::state_ptr MoleculeSaveBondsAction::performUndo(Action::state_ptr _state) {
61// MoleculeSaveBondsState *state = assert_cast<MoleculeSaveBondsState*>(_state.get());
62
63// string newName = state->mol->getName();
64// state->mol->setName(state->lastName);
65
66 return Action::failure;
67}
68
69Action::state_ptr MoleculeSaveBondsAction::performRedo(Action::state_ptr _state){
70 // Undo and redo have to do the same for this action
71 return performUndo(_state);
72}
73
74bool MoleculeSaveBondsAction::canUndo() {
75 return false;
76}
77
78bool MoleculeSaveBondsAction::shouldUndo() {
79 return false;
80}
81/** =========== end of function ====================== */
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