source: src/Actions/MoleculeAction/LinearInterpolationofTrajectoriesAction.cpp@ bcf653

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Last change on this file since bcf653 was bcf653, checked in by Frederik Heber <heber@…>, 14 years ago

Added copyright note to each .cpp file and an extensive one to builder.cpp.

  • Property mode set to 100644
File size: 4.6 KB
Line 
1/*
2 * Project: MoleCuilder
3 * Description: creates and alters molecular systems
4 * Copyright (C) 2010 University of Bonn. All rights reserved.
5 * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
6 */
7
8/*
9 * LinearInterpolationofTrajectoriesAction.cpp
10 *
11 * Created on: May 10, 2010
12 * Author: heber
13 */
14
15// include config.h
16#ifdef HAVE_CONFIG_H
17#include <config.h>
18#endif
19
20#include "Helpers/MemDebug.hpp"
21
22#include "Actions/MoleculeAction/LinearInterpolationofTrajectoriesAction.hpp"
23#include "Actions/ActionRegistry.hpp"
24#include "atom.hpp"
25#include "defs.hpp"
26#include "Helpers/Log.hpp"
27#include "molecule.hpp"
28#include "Helpers/Verbose.hpp"
29#include "World.hpp"
30
31#include <iostream>
32#include <fstream>
33#include <string>
34
35using namespace std;
36
37#include "UIElements/UIFactory.hpp"
38#include "UIElements/Dialog.hpp"
39#include "Actions/ValueStorage.hpp"
40
41
42/****** MoleculeLinearInterpolationofTrajectoriesAction *****/
43
44// memento to remember the state when undoing
45
46//class MoleculeLinearInterpolationofTrajectoriesState : public ActionState {
47//public:
48// MoleculeLinearInterpolationofTrajectoriesState(molecule* _mol,std::string _lastName) :
49// mol(_mol),
50// lastName(_lastName)
51// {}
52// molecule* mol;
53// std::string lastName;
54//};
55
56const char MoleculeLinearInterpolationofTrajectoriesAction::NAME[] = "linear-interpolate";
57
58MoleculeLinearInterpolationofTrajectoriesAction::MoleculeLinearInterpolationofTrajectoriesAction() :
59 Action(NAME)
60{}
61
62MoleculeLinearInterpolationofTrajectoriesAction::~MoleculeLinearInterpolationofTrajectoriesAction()
63{}
64
65void MoleculeLinearInterpolationofTrajectories(std::string &filename, int start, int end, bool IdMapping) {
66 ValueStorage::getInstance().setCurrentValue(MoleculeLinearInterpolationofTrajectoriesAction::NAME, filename);
67 ValueStorage::getInstance().setCurrentValue("start-step", start);
68 ValueStorage::getInstance().setCurrentValue("end-step", end);
69 ValueStorage::getInstance().setCurrentValue("id-mapping", IdMapping);
70 ActionRegistry::getInstance().getActionByName(MoleculeLinearInterpolationofTrajectoriesAction::NAME)->call(Action::NonInteractive);
71};
72
73Dialog* MoleculeLinearInterpolationofTrajectoriesAction::fillDialog(Dialog *dialog) {
74 ASSERT(dialog,"No Dialog given when filling action dialog");
75
76 dialog->queryString(NAME, ValueStorage::getInstance().getDescription(NAME));
77 dialog->queryInt("start-step", ValueStorage::getInstance().getDescription("start-step"));
78 dialog->queryInt("end-step", ValueStorage::getInstance().getDescription("end-step"));
79 dialog->queryBoolean("id-mapping", ValueStorage::getInstance().getDescription("id-mapping"));
80
81 return dialog;
82}
83
84Action::state_ptr MoleculeLinearInterpolationofTrajectoriesAction::performCall() {
85 string filename;
86 molecule *mol = NULL;
87 int start = -1;
88 int end = -1;
89 bool IdMapping = true;
90
91 ValueStorage::getInstance().queryCurrentValue(NAME, filename);
92 ValueStorage::getInstance().queryCurrentValue("start-step", start);
93 ValueStorage::getInstance().queryCurrentValue("end-step", end);
94 ValueStorage::getInstance().queryCurrentValue("id-mapping", IdMapping);
95
96 for (World::MoleculeSelectionIterator iter = World::getInstance().beginMoleculeSelection(); iter != World::getInstance().endMoleculeSelection(); ++iter) {
97 mol = iter->second;
98 DoLog(1) && (Log() << Verbose(1) << "Linear interpolation between configuration " << start << " and " << end << "." << endl);
99 if (IdMapping)
100 DoLog(1) && (Log() << Verbose(1) << "Using Identity for the permutation map." << endl);
101 if (!mol->LinearInterpolationBetweenConfiguration(start, end, filename, *(World::getInstance().getConfig()), IdMapping))
102 DoLog(2) && (Log() << Verbose(2) << "Could not store " << filename << " files." << endl);
103 else
104 DoLog(2) && (Log() << Verbose(2) << "Steps created and " << filename << " files stored." << endl);
105 }
106 return Action::success;
107}
108
109Action::state_ptr MoleculeLinearInterpolationofTrajectoriesAction::performUndo(Action::state_ptr _state) {
110// MoleculeLinearInterpolationofTrajectoriesState *state = assert_cast<MoleculeLinearInterpolationofTrajectoriesState*>(_state.get());
111
112// string newName = state->mol->getName();
113// state->mol->setName(state->lastName);
114
115 return Action::failure;
116}
117
118Action::state_ptr MoleculeLinearInterpolationofTrajectoriesAction::performRedo(Action::state_ptr _state){
119 // Undo and redo have to do the same for this action
120 return performUndo(_state);
121}
122
123bool MoleculeLinearInterpolationofTrajectoriesAction::canUndo() {
124 return false;
125}
126
127bool MoleculeLinearInterpolationofTrajectoriesAction::shouldUndo() {
128 return false;
129}
130
131const string MoleculeLinearInterpolationofTrajectoriesAction::getName() {
132 return NAME;
133}
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