| [eee966] | 1 | /*
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 | 2 |  * Project: MoleCuilder
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 | 3 |  * Description: creates and alters molecular systems
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 | 4 |  * Copyright (C)  2010 University of Bonn. All rights reserved.
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 | 5 |  * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
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 | 6 |  */
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 | 7 | 
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 | 8 | /*
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 | 9 |  * FillVoidWithMoleculeAction.cpp
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 | 10 |  *
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 | 11 |  *  Created on: May 10, 2010
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 | 12 |  *      Author: heber
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 | 13 |  */
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 | 14 | 
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 | 15 | // include config.h
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 | 16 | #ifdef HAVE_CONFIG_H
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 | 17 | #include <config.h>
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 | 18 | #endif
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 | 19 | 
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 | 20 | #include "Helpers/MemDebug.hpp"
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 | 21 | 
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 | 22 | #include "atom.hpp"
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 | 23 | #include "bondgraph.hpp"
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 | 24 | #include "boundary.hpp"
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 | 25 | #include "config.hpp"
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 | 26 | #include "molecule.hpp"
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 | 27 | #include "Helpers/Verbose.hpp"
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 | 28 | #include "World.hpp"
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 | 29 | 
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 | 30 | #include "Parser/MpqcParser.hpp"
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 | 31 | #include "Parser/PcpParser.hpp"
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 | 32 | #include "Parser/PdbParser.hpp"
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 | 33 | #include "Parser/TremoloParser.hpp"
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 | 34 | #include "Parser/XyzParser.hpp"
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 | 35 | #include "Parser/FormatParserStorage.hpp"
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 | 36 | 
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 | 37 | #include <iostream>
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 | 38 | #include <string>
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 | 39 | 
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 | 40 | using namespace std;
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 | 41 | 
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 | 42 | #include "Actions/MoleculeAction/FillVoidWithMoleculeAction.hpp"
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 | 43 | 
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 | 44 | // and construct the stuff
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 | 45 | #include "FillVoidWithMoleculeAction.def"
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 | 46 | #include "Action_impl_pre.hpp"
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 | 47 | /** =========== define the function ====================== */
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 | 48 | Action::state_ptr MoleculeFillVoidWithMoleculeAction::performCall() {
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 | 49 | 
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 | 50 |   // obtain information
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 | 51 |   getParametersfromValueStorage();
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 | 52 | 
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 | 53 |   DoLog(1) && (Log() << Verbose(1) << "Filling Box with water molecules, lengths(" << params.lengths[0] << "," << params.lengths[1] << "," << params.lengths[2] << "), distances (" << params.distances[0] << "," << params.distances[1] << "," << params.distances[2] << "), DoRotate " << params.DoRotate << "." << endl);
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 | 54 |   // construct water molecule
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 | 55 |   molecule *filler = World::getInstance().createMolecule();
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| [e4afb4] | 56 |   std::string FilenameSuffix = params.fillername.string().substr(params.fillername.string().find_last_of('.')+1, params.fillername.string().length());
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| [eee966] | 57 |   ifstream input;
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| [e4afb4] | 58 |   input.open(params.fillername.string().c_str());
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| [eee966] | 59 |   switch (FormatParserStorage::getInstance().getTypeFromSuffix(FilenameSuffix)) {
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 | 60 |     case mpqc:
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 | 61 |       {
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 | 62 |         MpqcParser mpqcparser;
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 | 63 |         mpqcparser.load(&input);
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 | 64 |         break;
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 | 65 |       }
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 | 66 |     case pcp:
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 | 67 |       {
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 | 68 |         PcpParser pcpparser;
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 | 69 |         pcpparser.load(&input);
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 | 70 |         break;
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 | 71 |       }
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 | 72 |     case pdb:
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 | 73 |       {
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 | 74 |         PdbParser pdbparser;
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 | 75 |         pdbparser.load(&input);
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 | 76 |         break;
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 | 77 |       }
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 | 78 |     case tremolo:
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 | 79 |       {
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 | 80 |         TremoloParser tremoloparser;
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 | 81 |         tremoloparser.load(&input);
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 | 82 |         break;
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 | 83 |       }
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 | 84 |     case xyz:
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 | 85 |       {
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 | 86 |         XyzParser xyzparser;
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 | 87 |         xyzparser.load(&input);
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 | 88 |         break;
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 | 89 |       }
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 | 90 |     default:
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 | 91 |       DoeLog(0) && (eLog()<< Verbose(0) << "Could not parse filler molecule from " << params.fillername << "." << endl);
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 | 92 |       break;
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 | 93 |   }
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 | 94 |   World::MoleculeIterator iter = World::getInstance().getMoleculeIter();
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 | 95 |   for (; iter != World::getInstance().moleculeEnd(); ++iter)
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 | 96 |     filler = *iter; // get last molecule
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| [e4afb4] | 97 |   filler->SetNameFromFilename(params.fillername.string().c_str());
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| [eee966] | 98 |   World::getInstance().getConfig()->BG->ConstructBondGraph(filler);
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 | 99 | 
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 | 100 |   // call routine
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 | 101 |   double distance[NDIM];
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 | 102 |   for (int i=0;i<NDIM;i++)
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 | 103 |     distance[i] = params.distances[i];
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 | 104 |   FillVoidWithMolecule(filler, *(World::getInstance().getConfig()), distance, params.lengths[0], params.lengths[1], params.lengths[2], params.DoRotate);
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 | 105 | 
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 | 106 |   return Action::success;
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 | 107 | }
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 | 108 | 
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 | 109 | Action::state_ptr MoleculeFillVoidWithMoleculeAction::performUndo(Action::state_ptr _state) {
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 | 110 | //  MoleculeFillVoidWithMoleculeState *state = assert_cast<MoleculeFillVoidWithMoleculeState*>(_state.get());
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 | 111 | 
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 | 112 | //  string newName = state->mol->getName();
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 | 113 | //  state->mol->setName(state->lastName);
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 | 114 | 
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 | 115 |   return Action::failure;
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 | 116 | }
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 | 117 | 
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 | 118 | Action::state_ptr MoleculeFillVoidWithMoleculeAction::performRedo(Action::state_ptr _state){
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 | 119 |   // Undo and redo have to do the same for this action
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 | 120 |   return performUndo(_state);
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 | 121 | }
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 | 122 | 
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 | 123 | bool MoleculeFillVoidWithMoleculeAction::canUndo() {
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 | 124 |   return false;
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 | 125 | }
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 | 126 | 
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 | 127 | bool MoleculeFillVoidWithMoleculeAction::shouldUndo() {
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 | 128 |   return false;
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 | 129 | }
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 | 130 | /** =========== end of function ====================== */
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