source: src/Actions/Makefile.am@ bf4b9f

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Last change on this file since bf4b9f was bf4b9f, checked in by Frederik Heber <heber@…>, 14 years ago

Moved LinearAlgebra from folder src/ into distinct sub-package.

  • src/LinearAlgebra folder is now LinearAlgebra/src/LinearAlgebra due to include consistency.
  • src/LinearAlgebra/unittests have been moved to LinearAlgebra/unittests.
  • All Makefile.am's had to be changed due to changed location of library.
  • renamed libMolecuilderLinearAlgebra to libLinearAlgebra.
  • CONFIG_AUX_DIR is build-aux 9for molecuilder and LinearAlgebra).
  • m4 is symlinked from below.
  • build-aux now contains small README such that it is created automatically.
  • Property mode set to 100644
File size: 11.8 KB
Line 
1# PLEASE adhere to the alphabetical ordering in this Makefile!
2# Also indentation by a single tab
3
4INCLUDES = -I$(top_srcdir)/src -I$(top_srcdir)/LinearAlgebra/src
5
6AM_LDFLAGS = -ldl
7AM_CPPFLAGS = ${BOOST_CPPFLAGS} ${CodePatterns_CFLAGS}
8
9ACTIONSSOURCE = \
10 ${ANALYSISACTIONSOURCE} \
11 ${ATOMACTIONSOURCE} \
12 ${CMDACTIONSOURCE} \
13 ${FRAGMENTATIONACTIONSOURCE} \
14 ${GRAPHACTIONSOURCE} \
15 ${MOLECULEACTIONSOURCE} \
16 ${PARSERACTIONSOURCE} \
17 ${RANDONNUMBERSSOURCE} \
18 ${SELECTIONATOMACTIONSOURCE} \
19 ${SELECTIONMOLECULEACTIONSOURCE} \
20 ${TESSELATIONACTIONSOURCE} \
21 ${WORLDACTIONSOURCE} \
22 RedoAction.cpp \
23 UndoAction.cpp \
24 Values.cpp \
25 ValueStorage.cpp
26
27ACTIONSHEADER = \
28 ${ANALYSISACTIONHEADER} \
29 ${ATOMACTIONHEADER} \
30 ${CMDACTIONHEADER} \
31 ${FRAGMENTATIONACTIONHEADER} \
32 ${GRAPHACTIONHEADER} \
33 ${MOLECULEACTIONHEADER} \
34 ${PARSERACTIONHEADER} \
35 ${RANDONNUMBERSHEADER} \
36 ${SELECTIONATOMACTIONHEADER} \
37 ${SELECTIONMOLECULEACTIONHEADER} \
38 ${TESSELATIONACTIONHEADER} \
39 ${WORLDACTIONHEADER} \
40 Values.hpp \
41 ValueStorage.hpp
42
43ANALYSISACTIONSOURCE = \
44 AnalysisAction/DipoleAngularCorrelationAction.cpp \
45 AnalysisAction/MolecularVolumeAction.cpp \
46 AnalysisAction/PairCorrelationAction.cpp \
47 AnalysisAction/PointCorrelationAction.cpp \
48 AnalysisAction/PrincipalAxisSystemAction.cpp \
49 AnalysisAction/SurfaceCorrelationAction.cpp
50ANALYSISACTIONHEADER = \
51 AnalysisAction/DipoleAngularCorrelationAction.hpp \
52 AnalysisAction/MolecularVolumeAction.hpp \
53 AnalysisAction/PairCorrelationAction.hpp \
54 AnalysisAction/PointCorrelationAction.hpp \
55 AnalysisAction/PrincipalAxisSystemAction.hpp \
56 AnalysisAction/SurfaceCorrelationAction.hpp
57
58ATOMACTIONSOURCE = \
59 AtomAction/AddAction.cpp \
60 AtomAction/ChangeElementAction.cpp \
61 AtomAction/RemoveAction.cpp \
62 AtomAction/RotateAroundOriginByAngleAction.cpp \
63 AtomAction/SaveSelectedAtomsAction.cpp \
64 AtomAction/TranslateAction.cpp
65ATOMACTIONHEADER = \
66 AtomAction/AddAction.hpp \
67 AtomAction/ChangeElementAction.hpp \
68 AtomAction/RemoveAction.cpp \
69 AtomAction/RotateAroundOriginByAngleAction.hpp \
70 AtomAction/SaveSelectedAtomsAction.hpp \
71 AtomAction/TranslateAction.hpp
72
73CMDACTIONSOURCE = \
74 CommandAction/BondLengthTableAction.cpp \
75 CommandAction/ElementDbAction.cpp \
76 CommandAction/FastParsingAction.cpp \
77 CommandAction/HelpAction.cpp \
78 CommandAction/VerboseAction.cpp \
79 CommandAction/VersionAction.cpp \
80 CommandAction/WarrantyAction.cpp
81CMDACTIONHEADER = \
82 CommandAction/BondLengthTableAction.hpp \
83 CommandAction/ElementDbAction.hpp \
84 CommandAction/FastParsingAction.hpp \
85 CommandAction/HelpAction.hpp \
86 CommandAction/VerboseAction.hpp \
87 CommandAction/VersionAction.hpp \
88 CommandAction/WarrantyAction.hpp
89
90FRAGMENTATIONACTIONSOURCE = \
91 FragmentationAction/FragmentationAction.cpp
92FRAGMENTATIONACTIONHEADER = \
93 FragmentationAction/FragmentationAction.hpp
94
95GRAPHACTIONSOURCE = \
96 GraphAction/CreateAdjacencyAction.cpp \
97 GraphAction/DepthFirstSearchAction.cpp \
98 GraphAction/SubgraphDissectionAction.cpp
99GRAPHACTIONHEADER = \
100 GraphAction/CreateAdjacencyAction.hpp \
101 GraphAction/DepthFirstSearchAction.hpp \
102 GraphAction/SubgraphDissectionAction.hpp
103
104MOLECULEACTIONSOURCE = \
105 MoleculeAction/BondFileAction.cpp \
106 MoleculeAction/ChangeNameAction.cpp \
107 MoleculeAction/CopyAction.cpp \
108 MoleculeAction/FillWithMoleculeAction.cpp \
109 MoleculeAction/FillVoidWithMoleculeAction.cpp \
110 MoleculeAction/LinearInterpolationofTrajectoriesAction.cpp \
111 MoleculeAction/LoadAction.cpp \
112 MoleculeAction/RotateAroundSelfByAngleAction.cpp \
113 MoleculeAction/RotateToPrincipalAxisSystemAction.cpp \
114 MoleculeAction/SaveSelectedMoleculesAction.cpp \
115 MoleculeAction/SaveAdjacencyAction.cpp \
116 MoleculeAction/SaveBondsAction.cpp \
117 MoleculeAction/SaveTemperatureAction.cpp \
118 MoleculeAction/SuspendInWaterAction.cpp \
119 MoleculeAction/VerletIntegrationAction.cpp
120MOLECULEACTIONHEADER = \
121 MoleculeAction/BondFileAction.hpp \
122 MoleculeAction/ChangeNameAction.hpp \
123 MoleculeAction/CopyAction.hpp \
124 MoleculeAction/FillWithMoleculeAction.hpp \
125 MoleculeAction/FillVoidWithMoleculeAction.hpp \
126 MoleculeAction/LinearInterpolationofTrajectoriesAction.hpp \
127 MoleculeAction/LoadAction.cpp \
128 MoleculeAction/RotateAroundSelfByAngleAction.hpp \
129 MoleculeAction/RotateToPrincipalAxisSystemAction.hpp \
130 MoleculeAction/SaveSelectedMoleculesAction.hpp \
131 MoleculeAction/SaveAdjacencyAction.hpp \
132 MoleculeAction/SaveBondsAction.hpp \
133 MoleculeAction/SaveTemperatureAction.hpp \
134 MoleculeAction/SuspendInWaterAction.hpp \
135 MoleculeAction/VerletIntegrationAction.hpp
136
137PARSERACTIONSOURCE = \
138 ParserAction/ParseTremoloPotentialsAction.cpp \
139 ParserAction/SetMpqcParametersAction.cpp \
140 ParserAction/SetOutputFormatsAction.cpp
141PARSERACTIONHEADER = \
142 ParserAction/ParseTremoloPotentialsAction.hpp \
143 ParserAction/SetMpqcParametersAction.hpp \
144 ParserAction/SetOutputFormatsAction.hpp
145
146RANDONNUMBERSSOURCE =\
147 RandomNumbersAction/SetRandomNumbersDistributionAction.cpp \
148 RandomNumbersAction/SetRandomNumbersEngineAction.cpp
149RANDONNUMBERSHEADER =\
150 RandomNumbersAction/SetRandomNumbersDistributionAction.hpp \
151 RandomNumbersAction/SetRandomNumbersEngineAction.hpp
152
153SELECTIONATOMACTIONSOURCE = \
154 SelectionAction/Atoms/AllAtomsAction.cpp \
155 SelectionAction/Atoms/AllAtomsInsideCuboidAction.cpp \
156 SelectionAction/Atoms/AllAtomsInsideSphereAction.cpp \
157 SelectionAction/Atoms/AllAtomsOfMoleculeAction.cpp \
158 SelectionAction/Atoms/AtomByElementAction.cpp \
159 SelectionAction/Atoms/AtomByIdAction.cpp \
160 SelectionAction/Atoms/ClearAllAtomsAction.cpp \
161 SelectionAction/Atoms/NotAllAtomsAction.cpp \
162 SelectionAction/Atoms/NotAllAtomsInsideCuboidAction.cpp \
163 SelectionAction/Atoms/NotAllAtomsInsideSphereAction.cpp \
164 SelectionAction/Atoms/NotAllAtomsOfMoleculeAction.cpp \
165 SelectionAction/Atoms/NotAtomByElementAction.cpp \
166 SelectionAction/Atoms/NotAtomByIdAction.cpp
167SELECTIONATOMACTIONHEADER = \
168 SelectionAction/Atoms/AllAtomsAction.hpp \
169 SelectionAction/Atoms/AllAtomsInsideCuboidAction.hpp \
170 SelectionAction/Atoms/AllAtomsInsideSphereAction.hpp \
171 SelectionAction/Atoms/AllAtomsOfMoleculeAction.hpp \
172 SelectionAction/Atoms/AtomByElementAction.hpp \
173 SelectionAction/Atoms/AtomByIdAction.hpp \
174 SelectionAction/Atoms/ClearAllAtomsAction.hpp \
175 SelectionAction/Atoms/NotAllAtomsAction.hpp \
176 SelectionAction/Atoms/NotAllAtomsInsideCuboidAction.hpp \
177 SelectionAction/Atoms/NotAllAtomsInsideSphereAction.hpp \
178 SelectionAction/Atoms/NotAllAtomsOfMoleculeAction.hpp \
179 SelectionAction/Atoms/NotAtomByElementAction.hpp \
180 SelectionAction/Atoms/NotAtomByIdAction.hpp
181
182SELECTIONMOLECULEACTIONSOURCE = \
183 SelectionAction/Molecules/AllMoleculesAction.cpp \
184 SelectionAction/Molecules/ClearAllMoleculesAction.cpp \
185 SelectionAction/Molecules/MoleculeByFormulaAction.cpp \
186 SelectionAction/Molecules/MoleculeByIdAction.cpp \
187 SelectionAction/Molecules/MoleculeByNameAction.cpp \
188 SelectionAction/Molecules/MoleculeByOrderAction.cpp \
189 SelectionAction/Molecules/MoleculeOfAtomAction.cpp \
190 SelectionAction/Molecules/NotAllMoleculesAction.cpp \
191 SelectionAction/Molecules/NotMoleculeByFormulaAction.cpp \
192 SelectionAction/Molecules/NotMoleculeByIdAction.cpp \
193 SelectionAction/Molecules/NotMoleculeByNameAction.cpp \
194 SelectionAction/Molecules/NotMoleculeByOrderAction.cpp \
195 SelectionAction/Molecules/NotMoleculeOfAtomAction.cpp
196SELECTIONMOLECULEACTIONHEADER = \
197 SelectionAction/Molecules/AllMoleculesAction.hpp \
198 SelectionAction/Molecules/ClearAllMoleculesAction.hpp \
199 SelectionAction/Molecules/MoleculeByFormulaAction.hpp \
200 SelectionAction/Molecules/MoleculeByIdAction.hpp \
201 SelectionAction/Molecules/MoleculeByNameAction.hpp \
202 SelectionAction/Molecules/MoleculeByOrderAction.hpp \
203 SelectionAction/Molecules/MoleculeOfAtomAction.hpp \
204 SelectionAction/Molecules/NotAllMoleculesAction.hpp \
205 SelectionAction/Molecules/NotMoleculeByFormulaAction.hpp \
206 SelectionAction/Molecules/NotMoleculeByIdAction.hpp \
207 SelectionAction/Molecules/NotMoleculeByNameAction.hpp \
208 SelectionAction/Molecules/NotMoleculeByOrderAction.hpp \
209 SelectionAction/Molecules/NotMoleculeOfAtomAction.hpp
210
211TESSELATIONACTIONSOURCE = \
212 TesselationAction/ConvexEnvelopeAction.cpp \
213 TesselationAction/NonConvexEnvelopeAction.cpp
214TESSELATIONACTIONHEADER = \
215 TesselationAction/ConvexEnvelopeAction.hpp \
216 TesselationAction/NonConvexEnvelopeAction.hpp
217
218WORLDACTIONSOURCE = \
219 WorldAction/AddEmptyBoundaryAction.cpp \
220 WorldAction/BoundInBoxAction.cpp \
221 WorldAction/CenterInBoxAction.cpp \
222 WorldAction/CenterOnEdgeAction.cpp \
223 WorldAction/ChangeBoxAction.cpp \
224 WorldAction/InputAction.cpp \
225 WorldAction/OutputAction.cpp \
226 WorldAction/RepeatBoxAction.cpp \
227 WorldAction/ScaleBoxAction.cpp \
228 WorldAction/SetDefaultNameAction.cpp \
229 WorldAction/SetWorldTimeAction.cpp
230WORLDACTIONHEADER = \
231 WorldAction/AddEmptyBoundaryAction.hpp \
232 WorldAction/BoundInBoxAction.hpp \
233 WorldAction/CenterInBoxAction.hpp \
234 WorldAction/CenterOnEdgeAction.hpp \
235 WorldAction/ChangeBoxAction.hpp \
236 WorldAction/InputAction.hpp \
237 WorldAction/OutputAction.hpp \
238 WorldAction/RepeatBoxAction.hpp \
239 WorldAction/ScaleBoxAction.hpp \
240 WorldAction/SetDefaultNameAction.hpp \
241 WorldAction/SetWorldTimeAction.hpp
242
243
244lib_LTLIBRARIES = libMolecuilderActions.la
245libMolecuilderActions_la_includedir = $(includedir)/MoleCuilder/Actions/
246libMolecuilderActions_la_LIBADD = \
247 ../Parser/libMolecuilderParser.la \
248 ../Shapes/libMolecuilderShapes.la \
249 ../Graph/libMolecuilderGraph.la \
250 ${CodePatterns_LIBS}
251# ../UIElements/libMolecuilderUI.la
252nobase_libMolecuilderActions_la_include_HEADERS = ${ACTIONSHEADER}
253
254## Define the source file list for the "libexample-@MOLECUILDER_API_VERSION@.la"
255## target. Note that @MOLECUILDER_API_VERSION@ is not interpreted by Automake and
256## will therefore be treated as if it were literally part of the target name,
257## and the variable name derived from that.
258## The file extension .cc is recognized by Automake, and makes it produce
259## rules which invoke the C++ compiler to produce a libtool object file (.lo)
260## from each source file. Note that it is not necessary to list header files
261## which are already listed elsewhere in a _HEADERS variable assignment.
262libMolecuilderActions_la_SOURCES = ${ACTIONSSOURCE}
263
264## Instruct libtool to include ABI version information in the generated shared
265## library file (.so). The library ABI version is defined in configure.ac, so
266## that all version information is kept in one place.
267libMolecuilderActions_la_LDFLAGS = -version-info $(MOLECUILDER_SO_VERSION)
268
269## The generated configuration header is installed in its own subdirectory of
270## $(libdir). The reason for this is that the configuration information put
271## into this header file describes the target platform the installed library
272## has been built for. Thus the file must not be installed into a location
273## intended for architecture-independent files, as defined by the Filesystem
274## Hierarchy Standard (FHS).
275## The nodist_ prefix instructs Automake to not generate rules for including
276## the listed files in the distribution on 'make dist'. Files that are listed
277## in _HEADERS variables are normally included in the distribution, but the
278## configuration header file is generated at configure time and should not be
279## shipped with the source tarball.
280#libMolecuilderActions_libincludedir = $(libdir)/MoleCuilder/include
281#nodist_libMolecuilderActions_libinclude_HEADERS = $(top_builddir)/libmolecuilder_config.h
282
283## Install the generated pkg-config file (.pc) into the expected location for
284## architecture-dependent package configuration information. Occasionally,
285## pkg-config files are also used for architecture-independent data packages,
286## in which case the correct install location would be $(datadir)/pkgconfig.
287#pkgconfigdir = $(libdir)/pkgconfig
288#pkgconfig_DATA = $(top_builddir)/MoleCuilder.pc
289
290unity.cpp:
291 echo "" > unity.cpp; \
292 list='$(ACTIONSSOURCE)'; for file in $$list; do \
293 echo "#include \"$(srcdir)/$$file\"" >> unity.cpp; \
294 done;
295
296MOSTLYCLEANFILES = unity.cpp
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