/*
* Project: MoleCuilder
* Description: creates and alters molecular systems
* Copyright (C) 2021 Frederik Heber. All rights reserved.
*
*
* This file is part of MoleCuilder.
*
* MoleCuilder is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 2 of the License, or
* (at your option) any later version.
*
* MoleCuilder is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with MoleCuilder. If not, see .
*/
/*
* EvaluateStabilityAction.cpp
*
* Created on: Apr 18, 2021
* Author: heber
*/
// include config.h
#ifdef HAVE_CONFIG_H
#include
#endif
//#include "CodePatterns/MemDebug.hpp"
#include "CodePatterns/Log.hpp"
#include
#include "Fragmentation/Evaluation/StabilityEvaluator.hpp"
#include "World.hpp"
#include "Actions/FragmentationAction/EvaluateStabilityAction.hpp"
using namespace MoleCuilder;
// and construct the stuff
#include "EvaluateStabilityAction.def"
#include "Action_impl_pre.hpp"
/** =========== define the function ====================== */
ActionState::ptr FragmentationEvaluateStabilityAction::performCall() {
if (World::getConstInstance().countSelectedMolecules() != 1) {
STATUS("Exactly one molecule needs to be selected.");
return Action::failure;
}
const molecule *mol = *(World::getConstInstance().getSelectedMolecules().begin());
// evaluate
const StabilityEvaluator evaluator(mol);
const StabilityEvaluator::stabilities_t stabilities = evaluator();
// write to file
const std::string outputfilename = params.outputFilename.get().string();
LOG(1, "INFO: Stability criterions are "+toString(stabilities));
{
std::ofstream outputstream(outputfilename.c_str());
const char separator = '\t';
if (outputstream.good()) { // check if opened
// write header
outputstream << "educt1\teduct2\tenergy_educts\tproduct1\tproduct2\tenergy_products" << std::endl;
for (StabilityEvaluator::stabilities_t::const_iterator iter = stabilities.begin();
iter != stabilities.end(); ++iter) {
outputstream << iter->formula_educt1 << separator;
outputstream << iter->formula_educt2 << separator;
outputstream << iter->energy_educts << separator;
outputstream << iter->formula_product1 << separator;
outputstream << iter->formula_product2 << separator;
outputstream << iter->energy_products << std::endl;
}
if (outputstream.fail()) { // check if correctly written
STATUS("Failed to write to file "+outputfilename+".");
return Action::failure;
} else
outputstream.close();
} else {
STATUS("Failed to open file "+outputfilename+" for writing.");
return Action::failure;
}
}
return Action::success;
}
ActionState::ptr FragmentationEvaluateStabilityAction::performUndo(ActionState::ptr _state) {
return Action::success;
}
ActionState::ptr FragmentationEvaluateStabilityAction::performRedo(ActionState::ptr _state){
return Action::success;
}
bool FragmentationEvaluateStabilityAction::canUndo() {
return true;
}
bool FragmentationEvaluateStabilityAction::shouldUndo() {
return true;
}
/** =========== end of function ====================== */