| [bcf653] | 1 | /* | 
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|  | 2 | * Project: MoleCuilder | 
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|  | 3 | * Description: creates and alters molecular systems | 
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| [0aa122] | 4 | * Copyright (C)  2010-2012 University of Bonn. All rights reserved. | 
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| [94d5ac6] | 5 | * | 
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|  | 6 | * | 
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|  | 7 | *   This file is part of MoleCuilder. | 
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|  | 8 | * | 
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|  | 9 | *    MoleCuilder is free software: you can redistribute it and/or modify | 
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|  | 10 | *    it under the terms of the GNU General Public License as published by | 
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|  | 11 | *    the Free Software Foundation, either version 2 of the License, or | 
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|  | 12 | *    (at your option) any later version. | 
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|  | 13 | * | 
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|  | 14 | *    MoleCuilder is distributed in the hope that it will be useful, | 
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|  | 15 | *    but WITHOUT ANY WARRANTY; without even the implied warranty of | 
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|  | 16 | *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
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|  | 17 | *    GNU General Public License for more details. | 
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|  | 18 | * | 
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|  | 19 | *    You should have received a copy of the GNU General Public License | 
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|  | 20 | *    along with MoleCuilder.  If not, see <http://www.gnu.org/licenses/>. | 
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| [bcf653] | 21 | */ | 
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|  | 22 |  | 
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| [97ebf8] | 23 | /* | 
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|  | 24 | * AddAction.cpp | 
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|  | 25 | * | 
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|  | 26 | *  Created on: May 9, 2010 | 
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|  | 27 | *      Author: heber | 
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|  | 28 | */ | 
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|  | 29 |  | 
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| [bf3817] | 30 | // include config.h | 
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|  | 31 | #ifdef HAVE_CONFIG_H | 
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|  | 32 | #include <config.h> | 
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|  | 33 | #endif | 
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|  | 34 |  | 
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| [ad011c] | 35 | #include "CodePatterns/MemDebug.hpp" | 
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| [112b09] | 36 |  | 
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| [ea2830] | 37 | #include "Descriptors/AtomIdDescriptor.hpp" | 
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| [6f0841] | 38 | #include "Atom/atom.hpp" | 
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| [3bdb6d] | 39 | #include "Element/element.hpp" | 
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| [ad011c] | 40 | #include "CodePatterns/Log.hpp" | 
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| [f0a3ec] | 41 | #include "molecule.hpp" | 
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| [57f243] | 42 | #include "LinearAlgebra/Vector.hpp" | 
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| [ad011c] | 43 | #include "CodePatterns/Verbose.hpp" | 
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| [97ebf8] | 44 | #include "World.hpp" | 
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|  | 45 |  | 
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|  | 46 | #include <iostream> | 
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|  | 47 | #include <string> | 
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|  | 48 |  | 
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| [8bb05e] | 49 | #include "Actions/AtomAction/AddAction.hpp" | 
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| [9d33ba] | 50 |  | 
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| [ce7fdc] | 51 | using namespace MoleCuilder; | 
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|  | 52 |  | 
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| [8bb05e] | 53 | // and construct the stuff | 
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|  | 54 | #include "AddAction.def" | 
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|  | 55 | #include "Action_impl_pre.hpp" | 
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|  | 56 | /** =========== define the function ====================== */ | 
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| [ceaab1] | 57 |  | 
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|  | 58 | atom * getNewAtom(const AtomAddAction::AtomAddParameters &_params) | 
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|  | 59 | { | 
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| [85537a] | 60 | atom * first = World::getInstance().createAtom(); | 
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| [ceaab1] | 61 | first->setType(_params.elemental.get()); | 
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|  | 62 | first->setPosition(_params.position.get()); | 
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|  | 63 |  | 
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|  | 64 | return first; | 
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|  | 65 | } | 
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|  | 66 |  | 
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| [8ad68b] | 67 | atom * regetNewAtom(const AtomAddAction::AtomAddParameters &_params, const atomId_t _id) | 
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|  | 68 | { | 
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|  | 69 | atom * first = World::getInstance().recreateAtom(_id); | 
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|  | 70 | first->setType(_params.elemental.get()); | 
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|  | 71 | first->setPosition(_params.position.get()); | 
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|  | 72 |  | 
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|  | 73 | return first; | 
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|  | 74 | } | 
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|  | 75 |  | 
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| [ceaab1] | 76 | std::vector<atomId_t> createAtoms( | 
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|  | 77 | const AtomAddAction::AtomAddParameters &_params, | 
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|  | 78 | std::vector<molecule *> &_molecules) | 
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|  | 79 | { | 
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|  | 80 | std::vector<atomId_t> ids; | 
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|  | 81 | if (!_molecules.empty()) { | 
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|  | 82 | if (_molecules.size() == 1) { | 
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|  | 83 | atom *first = getNewAtom(_params); | 
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|  | 84 | molecule *mol = *_molecules.begin(); | 
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|  | 85 | LOG(1, "Adding new atom with element " << first->getType()->getName() | 
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|  | 86 | << " at " << (first->getPosition()) << " to selected molecule " | 
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|  | 87 | << mol->getName()+"."); | 
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|  | 88 | mol->AddAtom(first); | 
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|  | 89 | ids.push_back(first->getId()); | 
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|  | 90 | } | 
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|  | 91 | } else { | 
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|  | 92 | atom *first = getNewAtom(_params); | 
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|  | 93 | molecule *mol = World::getInstance().createMolecule(); | 
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|  | 94 | mol->setName("none"); | 
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|  | 95 | mol->AddAtom(first); | 
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|  | 96 | LOG(1, "Adding new atom with element " << first->getType()->getName() | 
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|  | 97 | << " at " << (first->getPosition()) << " to new molecule."); | 
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|  | 98 | ids.push_back(first->getId()); | 
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| [97ebf8] | 99 | } | 
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| [ceaab1] | 100 |  | 
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|  | 101 | return ids; | 
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|  | 102 | } | 
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|  | 103 |  | 
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| [8ad68b] | 104 | std::vector<atomId_t> recreateAtoms( | 
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|  | 105 | const AtomAddAction::AtomAddParameters &_params, | 
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|  | 106 | const std::vector<atomId_t> &_ids, | 
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|  | 107 | std::vector<molecule *> &_molecules) | 
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|  | 108 | { | 
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|  | 109 | molecule *mol = NULL; | 
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|  | 110 | if (!_molecules.empty()) { | 
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|  | 111 | ASSERT (_molecules.size() == 1, | 
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|  | 112 | "recreateAtoms() - more than one molecules given."); | 
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|  | 113 | mol = *_molecules.begin(); | 
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|  | 114 | } else { | 
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|  | 115 | mol = World::getInstance().createMolecule(); | 
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|  | 116 | mol->setName("none"); | 
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|  | 117 | } | 
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|  | 118 | std::vector<atomId_t> newids; | 
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|  | 119 | for (std::vector<atomId_t>::const_iterator iter = _ids.begin(); | 
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|  | 120 | iter != _ids.end(); ++iter) { | 
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|  | 121 | atom *first = regetNewAtom(_params, *iter); | 
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|  | 122 | if (first != NULL) { | 
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|  | 123 | newids.push_back(first->getId()); | 
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|  | 124 | mol->AddAtom(first); | 
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|  | 125 | LOG(1, "Adding new atom with element " << first->getType()->getName() | 
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|  | 126 | << " at " << (first->getPosition()) << " to new molecule."); | 
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|  | 127 | } else { | 
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|  | 128 | ELOG(1, "Could not recreate atom with id " << *iter); | 
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|  | 129 | break; | 
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|  | 130 | } | 
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|  | 131 | } | 
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|  | 132 |  | 
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|  | 133 | return newids; | 
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|  | 134 | } | 
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|  | 135 |  | 
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| [ceaab1] | 136 | ActionState::ptr AtomAddAction::performCall() { | 
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|  | 137 | // execute action | 
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|  | 138 | std::vector<molecule *> molecules = World::getInstance().getSelectedMolecules(); | 
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|  | 139 | std::vector<atomId_t> ids = createAtoms(params, molecules); | 
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|  | 140 |  | 
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|  | 141 | if (molecules.size() > 1) | 
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|  | 142 | return Action::failure; | 
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|  | 143 | else | 
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|  | 144 | return ActionState::ptr(new AtomAddState(ids, params)); | 
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| [97ebf8] | 145 | } | 
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|  | 146 |  | 
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| [b5b01e] | 147 | ActionState::ptr AtomAddAction::performUndo(ActionState::ptr _state) { | 
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| [ea2830] | 148 | AtomAddState *state = assert_cast<AtomAddState*>(_state.get()); | 
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| [97ebf8] | 149 |  | 
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| [ceaab1] | 150 | for (std::vector<atomId_t>::const_iterator iter = state->ids.begin(); | 
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|  | 151 | iter != state->ids.end(); ++iter) { | 
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|  | 152 | LOG(1, "Removing atom with id " << *iter << "."); | 
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|  | 153 | World::getInstance().destroyAtom(*iter); | 
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|  | 154 | } | 
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| [ea2830] | 155 |  | 
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| [b5b01e] | 156 | return ActionState::ptr(_state); | 
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| [97ebf8] | 157 | } | 
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|  | 158 |  | 
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| [b5b01e] | 159 | ActionState::ptr AtomAddAction::performRedo(ActionState::ptr _state){ | 
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| [ea2830] | 160 | AtomAddState *state = assert_cast<AtomAddState*>(_state.get()); | 
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|  | 161 |  | 
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| [ceaab1] | 162 | std::vector<molecule *> molecules = World::getInstance().getSelectedMolecules(); | 
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| [8ad68b] | 163 | std::vector<atomId_t> newids = recreateAtoms(state->params, state->ids, molecules); | 
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| [ceaab1] | 164 | if (newids.size() != state->ids.size()) { | 
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|  | 165 | STATUS("Could not recreate all atoms after undo."); | 
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|  | 166 | for (std::vector<atomId_t>::const_iterator iter = newids.begin(); iter != newids.end();++iter) | 
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|  | 167 | World::getInstance().destroyAtom(*iter); | 
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|  | 168 | return Action::failure; | 
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| [ea2830] | 169 | } | 
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| [8ad68b] | 170 | return ActionState::ptr(_state); | 
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| [97ebf8] | 171 | } | 
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|  | 172 |  | 
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|  | 173 | bool AtomAddAction::canUndo() { | 
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| [ea2830] | 174 | return true; | 
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| [97ebf8] | 175 | } | 
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|  | 176 |  | 
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|  | 177 | bool AtomAddAction::shouldUndo() { | 
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| [ea2830] | 178 | return true; | 
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| [97ebf8] | 179 | } | 
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| [8bb05e] | 180 | /** =========== end of function ====================== */ | 
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