| 1 | //
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| 2 | // File: MPQC_GaussianBasis_Molecular_Impl.cc
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| 3 | // Symbol: MPQC.GaussianBasis_Molecular-v0.2
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| 4 | // Symbol Type: class
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| 5 | // Babel Version: 0.10.2
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| 6 | // Description: Server-side implementation for MPQC.GaussianBasis_Molecular
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| 7 | //
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| 8 | // WARNING: Automatically generated; only changes within splicers preserved
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| 9 | //
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| 10 | // babel-version = 0.10.2
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| 11 | //
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| 12 | #include "MPQC_GaussianBasis_Molecular_Impl.hh"
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| 13 |
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| 14 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular._includes)
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| 15 | #include <chemistry/molecule/molecule.h>
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| 16 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular._includes)
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| 17 |
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| 18 | // user-defined constructor.
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| 19 | void MPQC::GaussianBasis_Molecular_impl::_ctor() {
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| 20 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular._ctor)
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| 21 | // add construction details here
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| 22 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular._ctor)
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| 23 | }
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| 24 |
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| 25 | // user-defined destructor.
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| 26 | void MPQC::GaussianBasis_Molecular_impl::_dtor() {
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| 27 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular._dtor)
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| 28 |
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| 29 | // JK: problems here
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| 30 | //for(int i=0; i<natom_; ++i)
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| 31 | // delete &atomic_array_[i];
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| 32 | //delete atomic_array_;
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| 33 |
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| 34 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular._dtor)
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| 35 | }
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| 36 |
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| 37 | // static class initializer.
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| 38 | void MPQC::GaussianBasis_Molecular_impl::_load() {
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| 39 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular._load)
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| 40 | // guaranteed to be called at most once before any other method in this class
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| 41 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular._load)
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| 42 | }
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| 43 |
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| 44 | // user-defined static methods: (none)
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| 45 |
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| 46 | // user-defined non-static methods:
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| 47 | /**
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| 48 | * Method: initialize[]
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| 49 | */
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| 50 | void
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| 51 | MPQC::GaussianBasis_Molecular_impl::initialize (
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| 52 | /* in */ void* scbasis,
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| 53 | /* in */ const ::std::string& label )
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| 54 | throw ()
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| 55 | {
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| 56 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular.initialize)
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| 57 |
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| 58 | label_ = label;
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| 59 |
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| 60 | gbs_ptr_ = static_cast< GaussianBasisSet* >(scbasis);
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| 61 | sc_gbs_.assign_pointer( gbs_ptr_ );
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| 62 | if(sc_gbs_.null())
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| 63 | cout << "Molecular: sc::GaussianBasisSet is null" << endl;
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| 64 |
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| 65 | // determine angular type
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| 66 | int has_pure = 0;
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| 67 | int has_cartesian = 0;
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| 68 | for(int i=0; i<sc_gbs_->nshell(); ++i) {
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| 69 | for(int j=0; j<sc_gbs_->shell(i).ncontraction(); ++j) {
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| 70 | if( sc_gbs_->shell(i).is_cartesian(j) )
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| 71 | ++has_cartesian;
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| 72 | if( sc_gbs_->shell(i).is_pure(j) )
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| 73 | ++has_pure;
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| 74 | }
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| 75 | }
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| 76 |
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| 77 | if(has_pure && has_cartesian)
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| 78 | angular_type_ = AngularType_MIXED;
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| 79 | else if(has_pure)
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| 80 | angular_type_ = AngularType_SPHERICAL;
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| 81 | else if(has_cartesian)
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| 82 | angular_type_ = AngularType_CARTESIAN;
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| 83 |
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| 84 | // create a CCA molecule
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| 85 | Ref<sc::Molecule> scmol = sc_gbs_->molecule();
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| 86 | natom_ = scmol->natom();
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| 87 | molecule_ = Chemistry_Molecule::_create();
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| 88 | molecule_.initialize(natom_, "bohr");
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| 89 | for( int i=0; i<natom_; ++i) {
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| 90 | molecule_.set_atomic_number(i,scmol->Z(i));
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| 91 | for( int j=0; j<3; ++j)
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| 92 | molecule_.set_cart_coor( i, j, scmol->r(i,j) );
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| 93 | }
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| 94 |
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| 95 | // create array of atomic basis sets
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| 96 | atomic_array_ = new MPQC::GaussianBasis_Atomic[sc_gbs_->ncenter()];
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| 97 | for( int i=0; i<sc_gbs_->ncenter(); ++i) {
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| 98 | atomic_array_[i] = MPQC::GaussianBasis_Atomic::_create();
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| 99 | atomic_array_[i].initialize(sc_gbs_.pointer(),i);
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| 100 | }
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| 101 |
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| 102 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular.initialize)
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| 103 | }
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| 104 |
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| 105 | /**
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| 106 | * Method: sc_gbs_pointer[]
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| 107 | */
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| 108 | void*
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| 109 | MPQC::GaussianBasis_Molecular_impl::sc_gbs_pointer ()
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| 110 | throw ()
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| 111 |
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| 112 | {
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| 113 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular.sc_gbs_pointer)
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| 114 | // insert implementation here
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| 115 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular.sc_gbs_pointer)
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| 116 | }
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| 117 |
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| 118 | /**
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| 119 | * Get the user specified name.
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| 120 | * @return User specified name.
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| 121 | */
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| 122 | ::std::string
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| 123 | MPQC::GaussianBasis_Molecular_impl::get_label ()
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| 124 | throw ()
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| 125 |
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| 126 | {
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| 127 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular.get_label)
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| 128 | return label_;
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| 129 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular.get_label)
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| 130 | }
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| 131 |
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| 132 | /**
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| 133 | * Get the number of basis functions.
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| 134 | * @return Number of basis functions.
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| 135 | */
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| 136 | int64_t
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| 137 | MPQC::GaussianBasis_Molecular_impl::get_n_basis ()
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| 138 | throw ()
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| 139 |
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| 140 | {
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| 141 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular.get_n_basis)
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| 142 | return sc_gbs_->nbasis();
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| 143 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular.get_n_basis)
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| 144 | }
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| 145 |
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| 146 | /**
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| 147 | * Get the number of shells.
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| 148 | * @return Number of shells.
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| 149 | */
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| 150 | int64_t
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| 151 | MPQC::GaussianBasis_Molecular_impl::get_n_shell ()
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| 152 | throw ()
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| 153 |
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| 154 | {
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| 155 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular.get_n_shell)
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| 156 | return sc_gbs_->nshell();
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| 157 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular.get_n_shell)
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| 158 | }
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| 159 |
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| 160 | /**
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| 161 | * Get the max angular momentum for any contraction in the basis set.
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| 162 | * @return Max angular momentum value.
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| 163 | */
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| 164 | int64_t
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| 165 | MPQC::GaussianBasis_Molecular_impl::get_max_angular_momentum ()
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| 166 | throw ()
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| 167 |
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| 168 | {
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| 169 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular.get_max_angular_momentum)
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| 170 | return sc_gbs_->max_angular_momentum();
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| 171 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular.get_max_angular_momentum)
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| 172 | }
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| 173 |
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| 174 | /**
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| 175 | * Get the angular type.
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| 176 | * @return enum AngularType {CARTESIAN,SPHERICAL,MIXED}
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| 177 | */
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| 178 | ::Chemistry::QC::GaussianBasis::AngularType
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| 179 | MPQC::GaussianBasis_Molecular_impl::get_angular_type ()
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| 180 | throw ()
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| 181 |
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| 182 | {
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| 183 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular.get_angular_type)
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| 184 | return angular_type_;
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| 185 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular.get_angular_type)
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| 186 | }
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| 187 |
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| 188 | /**
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| 189 | * Get an atomic basis set.
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| 190 | * @param atomnum Atom number.
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| 191 | * @return Atomic basis set.
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| 192 | */
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| 193 | ::Chemistry::QC::GaussianBasis::Atomic
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| 194 | MPQC::GaussianBasis_Molecular_impl::get_atomic (
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| 195 | /* in */ int64_t atomnum )
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| 196 | throw ()
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| 197 | {
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| 198 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular.get_atomic)
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| 199 | return atomic_array_[atomnum];
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| 200 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular.get_atomic)
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| 201 | }
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| 202 |
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| 203 | /**
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| 204 | * Get the molecule.
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| 205 | * @return The molecule.
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| 206 | */
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| 207 | ::Chemistry::Molecule
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| 208 | MPQC::GaussianBasis_Molecular_impl::get_molecule ()
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| 209 | throw ()
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| 210 |
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| 211 | {
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| 212 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular.get_molecule)
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| 213 | return molecule_;
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| 214 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular.get_molecule)
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| 215 | }
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| 216 |
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| 217 | /**
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| 218 | * Print the molecular basis data.
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| 219 | */
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| 220 | void
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| 221 | MPQC::GaussianBasis_Molecular_impl::print_molecular ()
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| 222 | throw ()
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| 223 |
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| 224 | {
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| 225 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular.print_molecular)
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| 226 | std::cout << "\nMolecular Basis Set:";
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| 227 | for( int i=0; i<natom_; ++i) {
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| 228 | atomic_array_[i].print_atomic();
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| 229 | }
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| 230 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular.print_molecular)
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| 231 | }
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| 232 |
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| 233 |
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| 234 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular._misc)
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| 235 | // Put miscellaneous code here
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| 236 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular._misc)
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| 237 |
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